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Lsi09G001210 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi09G001210
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionMitochondrial import inner membrane translocase subunit
Genome locationchr09:1161703..1165238
RNA-Seq ExpressionLsi09G001210
SyntenyLsi09G001210
Gene Ontology termsGO:0005758 - mitochondrial intermembrane space (cellular component)
InterPro domainsIPR004217 - Tim10-like
IPR035427 - Tim10-like domain superfamily
IPR039238 - Mitochondrial import inner membrane translocase subunit Tim8/13


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7017060.1 Mitochondrial import inner membrane translocase subunit TIM13, partial [Cucurbita argyrosperma subsp. argyrosperma]3.4e-2848.91Show/hide
Query:  MDSFSSPSTGSSPQFSANEFRDQLKTQLAQAYAEEFLEVLPLPLLVCSITYIIKLNALQNMEPRALDCTFQHSSPVFLLPLFLEAITFLHKALVENLQPH
        MDSFSSPS+GSS QFS NEFRDQLKTQLAQAYAEEFLEV    +L                                                       
Subjt:  MDSFSSPSTGSSPQFSANEFRDQLKTQLAQAYAEEFLEVLPLPLLVCSITYIIKLNALQNMEPRALDCTFQHSSPVFLLPLFLEAITFLHKALVENLQPH

Query:  LVKRALFLAANLPMPKPPIEVGKDVISQFLREMVWTLRVKCFDKCITKPGSSLSGSESSCISRCMERYIEATSIVSRALFKTPH
             L+L ++L + K              R    TLRVKCFDKCITKPGSSLSGSESSCISRCMERYIEAT IVSRALFKTPH
Subjt:  LVKRALFLAANLPMPKPPIEVGKDVISQFLREMVWTLRVKCFDKCITKPGSSLSGSESSCISRCMERYIEATSIVSRALFKTPH

XP_004145880.1 mitochondrial import inner membrane translocase subunit Tim13 [Cucumis sativus]2.4e-2646.74Show/hide
Query:  MDSFSSPSTGSSPQFSANEFRDQLKTQLAQAYAEEFLEVLPLPLLVCSITYIIKLNALQNMEPRALDCTFQHSSPVFLLPLFLEAITFLHKALVENLQPH
        MDSFSSPS+GSSPQFSANEFRDQLKTQLAQAYAEEFLE                                                              
Subjt:  MDSFSSPSTGSSPQFSANEFRDQLKTQLAQAYAEEFLEVLPLPLLVCSITYIIKLNALQNMEPRALDCTFQHSSPVFLLPLFLEAITFLHKALVENLQPH

Query:  LVKRALFLAANLPMPKPPIEVGKDVISQFLREMVWTLRVKCFDKCITKPGSSLSGSESSCISRCMERYIEATSIVSRALFKTPH
                                           TLRVKCFDKCITKPGSSLSGSESSCISRCMERYIEATSIVSRALFKTPH
Subjt:  LVKRALFLAANLPMPKPPIEVGKDVISQFLREMVWTLRVKCFDKCITKPGSSLSGSESSCISRCMERYIEATSIVSRALFKTPH

XP_022159838.1 mitochondrial import inner membrane translocase subunit Tim13 [Momordica charantia]1.5e-2344.02Show/hide
Query:  MDSFSSPSTGSSPQFSANEFRDQLKTQLAQAYAEEFLEVLPLPLLVCSITYIIKLNALQNMEPRALDCTFQHSSPVFLLPLFLEAITFLHKALVENLQPH
        MDSFSSPS+G S QFSA+EF+DQLKTQLAQAYAEEFLE                                                              
Subjt:  MDSFSSPSTGSSPQFSANEFRDQLKTQLAQAYAEEFLEVLPLPLLVCSITYIIKLNALQNMEPRALDCTFQHSSPVFLLPLFLEAITFLHKALVENLQPH

Query:  LVKRALFLAANLPMPKPPIEVGKDVISQFLREMVWTLRVKCFDKCITKPGSSLSGSESSCISRCMERYIEATSIVSRALFKTPH
                                           TLRVKCFDKCITKPGSSLSGSESSCISRCMERYIEATSIVS+ALFKTPH
Subjt:  LVKRALFLAANLPMPKPPIEVGKDVISQFLREMVWTLRVKCFDKCITKPGSSLSGSESSCISRCMERYIEATSIVSRALFKTPH

XP_022929052.1 mitochondrial import inner membrane translocase subunit TIM13-like isoform X6 [Cucurbita moschata]2.3e-2445.11Show/hide
Query:  MDSFSSPSTGSSPQFSANEFRDQLKTQLAQAYAEEFLEVLPLPLLVCSITYIIKLNALQNMEPRALDCTFQHSSPVFLLPLFLEAITFLHKALVENLQPH
        MDSFSSPS+GSS QFS NEFRDQLKTQLAQAYAEEFLE                                                              
Subjt:  MDSFSSPSTGSSPQFSANEFRDQLKTQLAQAYAEEFLEVLPLPLLVCSITYIIKLNALQNMEPRALDCTFQHSSPVFLLPLFLEAITFLHKALVENLQPH

Query:  LVKRALFLAANLPMPKPPIEVGKDVISQFLREMVWTLRVKCFDKCITKPGSSLSGSESSCISRCMERYIEATSIVSRALFKTPH
                                           TLRVKCFDKCITKPGSSLSGSESSCISRCMERYIEAT IVSRALFKTPH
Subjt:  LVKRALFLAANLPMPKPPIEVGKDVISQFLREMVWTLRVKCFDKCITKPGSSLSGSESSCISRCMERYIEATSIVSRALFKTPH

XP_038906948.1 mitochondrial import inner membrane translocase subunit TIM13 [Benincasa hispida]2.0e-2546.2Show/hide
Query:  MDSFSSPSTGSSPQFSANEFRDQLKTQLAQAYAEEFLEVLPLPLLVCSITYIIKLNALQNMEPRALDCTFQHSSPVFLLPLFLEAITFLHKALVENLQPH
        MDSFSSPS+GSS QFSANEFRDQLKTQLAQAYAEEFLE                                                              
Subjt:  MDSFSSPSTGSSPQFSANEFRDQLKTQLAQAYAEEFLEVLPLPLLVCSITYIIKLNALQNMEPRALDCTFQHSSPVFLLPLFLEAITFLHKALVENLQPH

Query:  LVKRALFLAANLPMPKPPIEVGKDVISQFLREMVWTLRVKCFDKCITKPGSSLSGSESSCISRCMERYIEATSIVSRALFKTPH
                                           TLRVKCFDKCITKPGSSLSGSESSCISRCMERYIEATSIVSRALFKTPH
Subjt:  LVKRALFLAANLPMPKPPIEVGKDVISQFLREMVWTLRVKCFDKCITKPGSSLSGSESSCISRCMERYIEATSIVSRALFKTPH

TrEMBL top hitse value%identityAlignment
A0A0A0KK66 Mitochondrial import inner membrane translocase subunit1.2e-2646.74Show/hide
Query:  MDSFSSPSTGSSPQFSANEFRDQLKTQLAQAYAEEFLEVLPLPLLVCSITYIIKLNALQNMEPRALDCTFQHSSPVFLLPLFLEAITFLHKALVENLQPH
        MDSFSSPS+GSSPQFSANEFRDQLKTQLAQAYAEEFLE                                                              
Subjt:  MDSFSSPSTGSSPQFSANEFRDQLKTQLAQAYAEEFLEVLPLPLLVCSITYIIKLNALQNMEPRALDCTFQHSSPVFLLPLFLEAITFLHKALVENLQPH

Query:  LVKRALFLAANLPMPKPPIEVGKDVISQFLREMVWTLRVKCFDKCITKPGSSLSGSESSCISRCMERYIEATSIVSRALFKTPH
                                           TLRVKCFDKCITKPGSSLSGSESSCISRCMERYIEATSIVSRALFKTPH
Subjt:  LVKRALFLAANLPMPKPPIEVGKDVISQFLREMVWTLRVKCFDKCITKPGSSLSGSESSCISRCMERYIEATSIVSRALFKTPH

A0A1S3AUN2 Mitochondrial import inner membrane translocase subunit1.2e-2646.74Show/hide
Query:  MDSFSSPSTGSSPQFSANEFRDQLKTQLAQAYAEEFLEVLPLPLLVCSITYIIKLNALQNMEPRALDCTFQHSSPVFLLPLFLEAITFLHKALVENLQPH
        MDSFSSPS+GSSPQFSANEFRDQLKTQLAQAYAEEFLE                                                              
Subjt:  MDSFSSPSTGSSPQFSANEFRDQLKTQLAQAYAEEFLEVLPLPLLVCSITYIIKLNALQNMEPRALDCTFQHSSPVFLLPLFLEAITFLHKALVENLQPH

Query:  LVKRALFLAANLPMPKPPIEVGKDVISQFLREMVWTLRVKCFDKCITKPGSSLSGSESSCISRCMERYIEATSIVSRALFKTPH
                                           TLRVKCFDKCITKPGSSLSGSESSCISRCMERYIEATSIVSRALFKTPH
Subjt:  LVKRALFLAANLPMPKPPIEVGKDVISQFLREMVWTLRVKCFDKCITKPGSSLSGSESSCISRCMERYIEATSIVSRALFKTPH

A0A6J1DZZ6 Mitochondrial import inner membrane translocase subunit7.1e-2444.02Show/hide
Query:  MDSFSSPSTGSSPQFSANEFRDQLKTQLAQAYAEEFLEVLPLPLLVCSITYIIKLNALQNMEPRALDCTFQHSSPVFLLPLFLEAITFLHKALVENLQPH
        MDSFSSPS+G S QFSA+EF+DQLKTQLAQAYAEEFLE                                                              
Subjt:  MDSFSSPSTGSSPQFSANEFRDQLKTQLAQAYAEEFLEVLPLPLLVCSITYIIKLNALQNMEPRALDCTFQHSSPVFLLPLFLEAITFLHKALVENLQPH

Query:  LVKRALFLAANLPMPKPPIEVGKDVISQFLREMVWTLRVKCFDKCITKPGSSLSGSESSCISRCMERYIEATSIVSRALFKTPH
                                           TLRVKCFDKCITKPGSSLSGSESSCISRCMERYIEATSIVS+ALFKTPH
Subjt:  LVKRALFLAANLPMPKPPIEVGKDVISQFLREMVWTLRVKCFDKCITKPGSSLSGSESSCISRCMERYIEATSIVSRALFKTPH

A0A6J1ELP2 Mitochondrial import inner membrane translocase subunit1.1e-2445.11Show/hide
Query:  MDSFSSPSTGSSPQFSANEFRDQLKTQLAQAYAEEFLEVLPLPLLVCSITYIIKLNALQNMEPRALDCTFQHSSPVFLLPLFLEAITFLHKALVENLQPH
        MDSFSSPS+GSS QFS NEFRDQLKTQLAQAYAEEFLE                                                              
Subjt:  MDSFSSPSTGSSPQFSANEFRDQLKTQLAQAYAEEFLEVLPLPLLVCSITYIIKLNALQNMEPRALDCTFQHSSPVFLLPLFLEAITFLHKALVENLQPH

Query:  LVKRALFLAANLPMPKPPIEVGKDVISQFLREMVWTLRVKCFDKCITKPGSSLSGSESSCISRCMERYIEATSIVSRALFKTPH
                                           TLRVKCFDKCITKPGSSLSGSESSCISRCMERYIEAT IVSRALFKTPH
Subjt:  LVKRALFLAANLPMPKPPIEVGKDVISQFLREMVWTLRVKCFDKCITKPGSSLSGSESSCISRCMERYIEATSIVSRALFKTPH

A0A6J1I4K9 Mitochondrial import inner membrane translocase subunit1.1e-2445.11Show/hide
Query:  MDSFSSPSTGSSPQFSANEFRDQLKTQLAQAYAEEFLEVLPLPLLVCSITYIIKLNALQNMEPRALDCTFQHSSPVFLLPLFLEAITFLHKALVENLQPH
        MDSFSSPS+GSS QFS NEFRDQLKTQLAQAYAEEFLE                                                              
Subjt:  MDSFSSPSTGSSPQFSANEFRDQLKTQLAQAYAEEFLEVLPLPLLVCSITYIIKLNALQNMEPRALDCTFQHSSPVFLLPLFLEAITFLHKALVENLQPH

Query:  LVKRALFLAANLPMPKPPIEVGKDVISQFLREMVWTLRVKCFDKCITKPGSSLSGSESSCISRCMERYIEATSIVSRALFKTPH
                                           TLRVKCFDKCITKPGSSLSGSESSCISRCMERYIEAT IVSRALFKTPH
Subjt:  LVKRALFLAANLPMPKPPIEVGKDVISQFLREMVWTLRVKCFDKCITKPGSSLSGSESSCISRCMERYIEATSIVSRALFKTPH

SwissProt top hitse value%identityAlignment
Q10481 Mitochondrial import inner membrane translocase subunit tim135.3e-0852.17Show/hide
Query:  EMVWTLRVKCFDKCITKPGSSLSGSESSCISRCMERYIEATSIVSR
        E++  +   CFDKCI +PGS+   +E SC+S+CMERY++A +IVSR
Subjt:  EMVWTLRVKCFDKCITKPGSSLSGSESSCISRCMERYIEATSIVSR

Q4PGT2 Mitochondrial import inner membrane translocase subunit TIM134.0e-0843.86Show/hide
Query:  EVGKDVISQFLREMVWTLRVKCFDKCITKPGSSLSGSESSCISRCMERYIEATSIVS
        +V  ++     ++++     KC+ KCI  PG+SLSG E +C++RCMERY EA +IVS
Subjt:  EVGKDVISQFLREMVWTLRVKCFDKCITKPGSSLSGSESSCISRCMERYIEATSIVS

Q9VTN3 Mitochondrial import inner membrane translocase subunit Tim135.3e-0840.58Show/hide
Query:  AANLPMPKPPIEVGKDVISQFLREMVWTLRVKCFDKCITKPGSSLSGSESSCISRCMERYIEATSIVSR
        AAN+   +   +V + +     +EM+  +  KCF KCI KPG SL  +E  CIS+CM+R+++A ++VSR
Subjt:  AANLPMPKPPIEVGKDVISQFLREMVWTLRVKCFDKCITKPGSSLSGSESSCISRCMERYIEATSIVSR

Q9XGY5 Mitochondrial import inner membrane translocase subunit Tim135.8e-1560.32Show/hide
Query:  EVGKDVISQFLREMVWTLRVKCFDKCITKPGSSLSGSESSCISRCMERYIEATSIVSRALFKT
        ++   +   + +E + T+  KCF KC+TKPGSSLSGSESSCISRC++RYIEAT IVSRALF +
Subjt:  EVGKDVISQFLREMVWTLRVKCFDKCITKPGSSLSGSESSCISRCMERYIEATSIVSRALFKT

Q9XH48 Mitochondrial import inner membrane translocase subunit TIM136.2e-1762.69Show/hide
Query:  PKPPIEVGKDVISQ-FLREMVWTLRVKCFDKCITKPGSSLSGSESSCISRCMERYIEATSIVSRALF
        P+  +E  K  ++Q +  E++ TLR KCFDKC+TKPGSSL GSESSCISRC+ERY+EAT+I+SR+LF
Subjt:  PKPPIEVGKDVISQ-FLREMVWTLRVKCFDKCITKPGSSLSGSESSCISRCMERYIEATSIVSRALF

Arabidopsis top hitse value%identityAlignment
AT1G61570.1 translocase of the inner mitochondrial membrane 134.4e-1862.69Show/hide
Query:  PKPPIEVGKDVISQ-FLREMVWTLRVKCFDKCITKPGSSLSGSESSCISRCMERYIEATSIVSRALF
        P+  +E  K  ++Q +  E++ TLR KCFDKC+TKPGSSL GSESSCISRC+ERY+EAT+I+SR+LF
Subjt:  PKPPIEVGKDVISQ-FLREMVWTLRVKCFDKCITKPGSSLSGSESSCISRCMERYIEATSIVSRALF

AT5G50810.1 translocase inner membrane subunit 83.0e-0644.9Show/hide
Query:  LREMVWTLRVKCFDKCITK-PGSSLSGSESSCISRCMERYIEATSIVSR
        + EMV  +   C+DKCIT  PGS  S SESSC++ C +RY++ + I+ +
Subjt:  LREMVWTLRVKCFDKCITK-PGSSLSGSESSCISRCMERYIEATSIVSR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTCATTTTCATCGCCTTCAACCGGTTCTTCTCCCCAATTTTCTGCCAATGAATTCAGGGATCAGCTCAAGACTCAGCTTGCTCAGGCCTACGCCGAGGAGTTTCT
TGAGGTTCTACCTCTCCCATTACTTGTTTGTTCAATTACTTATATCATAAAACTGAATGCACTCCAAAATATGGAGCCAAGGGCACTTGACTGTACCTTTCAACACAGTT
CACCAGTCTTTCTCTTGCCACTTTTCTTGGAAGCTATCACCTTCCTCCACAAAGCCTTAGTTGAGAACCTCCAACCCCACTTGGTCAAGAGAGCCCTATTTCTAGCTGCT
AATCTCCCAATGCCCAAACCTCCCATTGAAGTGGGAAAGGACGTGATTTCCCAATTTTTGAGGGAAATGGTGTGGACCTTAAGAGTGAAGTGCTTTGACAAGTGCATCAC
AAAGCCAGGGTCAAGCCTAAGTGGAAGTGAGAGCAGTTGCATCTCTAGGTGCATGGAGCGCTATATTGAGGCCACCAGCATCGTCAGTAGAGCCCTCTTTAAGACACCAC
ACTGA
mRNA sequenceShow/hide mRNA sequence
ATGGATTCATTTTCATCGCCTTCAACCGGTTCTTCTCCCCAATTTTCTGCCAATGAATTCAGGGATCAGCTCAAGACTCAGCTTGCTCAGGCCTACGCCGAGGAGTTTCT
TGAGGTTCTACCTCTCCCATTACTTGTTTGTTCAATTACTTATATCATAAAACTGAATGCACTCCAAAATATGGAGCCAAGGGCACTTGACTGTACCTTTCAACACAGTT
CACCAGTCTTTCTCTTGCCACTTTTCTTGGAAGCTATCACCTTCCTCCACAAAGCCTTAGTTGAGAACCTCCAACCCCACTTGGTCAAGAGAGCCCTATTTCTAGCTGCT
AATCTCCCAATGCCCAAACCTCCCATTGAAGTGGGAAAGGACGTGATTTCCCAATTTTTGAGGGAAATGGTGTGGACCTTAAGAGTGAAGTGCTTTGACAAGTGCATCAC
AAAGCCAGGGTCAAGCCTAAGTGGAAGTGAGAGCAGTTGCATCTCTAGGTGCATGGAGCGCTATATTGAGGCCACCAGCATCGTCAGTAGAGCCCTCTTTAAGACACCAC
ACTGAAATAATAGGTTTTCCTGAGACATTATGCGGTCGAGGTATCTTCAGCTACCTACATTTTGTTCGATATTTATTTTCCAGCTCTAAAATCTTTCTCGAGGAGACATG
CTTTTGATCTGTGCCCTAATAATAATATTGGTATCATGTGCTTGATTTGATTACATGTGAACTTTGGACCAATTAAACTCTCATTTCTTCTGATTTAACATGCTTCAATT
GGAGTTATTTGTGTGGGTATTTCTTCTGATT
Protein sequenceShow/hide protein sequence
MDSFSSPSTGSSPQFSANEFRDQLKTQLAQAYAEEFLEVLPLPLLVCSITYIIKLNALQNMEPRALDCTFQHSSPVFLLPLFLEAITFLHKALVENLQPHLVKRALFLAA
NLPMPKPPIEVGKDVISQFLREMVWTLRVKCFDKCITKPGSSLSGSESSCISRCMERYIEATSIVSRALFKTPH