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Lsi09G001260 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi09G001260
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionAvr9/Cf-9 rapidly elicited protein
Genome locationchr09:1226424..1226663
RNA-Seq ExpressionLsi09G001260
SyntenyLsi09G001260
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0042638.1 uncharacterized protein E6C27_scaffold44G001360 [Cucumis melo var. makuwa]5.3e-2382.14Show/hide
Query:  MNSMFSLFDAFAAELLLG-NFVRASSSVPSFTP--NNGGSASSAV-KPLPI-KKEETNSKNSSMKPRFALELDGLNCFETLVPN
        MNSMFSLFDAFAAE LLG NFVRASSS+PSFTP  NN  +ASSAV KPLP  KKEE   KNSS+KPRFALELDGLNCFETLVPN
Subjt:  MNSMFSLFDAFAAELLLG-NFVRASSSVPSFTP--NNGGSASSAV-KPLPI-KKEETNSKNSSMKPRFALELDGLNCFETLVPN
KAG6579594.1 hypothetical protein SDJN03_24042, partial [Cucurbita argyrosperma subsp. sororia]5.3e-2379.07Show/hide
Query:  MNSMFSLFDAFAAELLLGNFVRASSSVPSFTPN--NGGSASSA-VKPLPIKKEETN----SKNSSMKPRFALELDGLNCFETLVPN
        MNSMFS FDAFAAE+LLG FV AS+SVPSFTPN   GGSASSA VK +P KKEE N    SKNS MKPRFALELDGLNCFETLVPN
Subjt:  MNSMFSLFDAFAAELLLGNFVRASSSVPSFTPN--NGGSASSA-VKPLPIKKEETN----SKNSSMKPRFALELDGLNCFETLVPN
XP_011654674.1 uncharacterized protein LOC105435432 [Cucumis sativus]2.6e-2582.5Show/hide
Query:  MNSMFSLFDAFAAELLLGNFVRASSSVPSFTPNNGGSASSAVKPLPIKK-EETNSKNSSMKPRFALELDGLNCFETLVPN
        MNSMFSLFDAFAAE LLGNFVRASSSVPSFTPNN  ++ +  KPLP KK EE  SKNS MKPRFALELDGLNCFETLVPN
Subjt:  MNSMFSLFDAFAAELLLGNFVRASSSVPSFTPNNGGSASSAVKPLPIKK-EETNSKNSSMKPRFALELDGLNCFETLVPN
XP_022929066.1 uncharacterized protein LOC111435766 [Cucurbita moschata]5.3e-2379.07Show/hide
Query:  MNSMFSLFDAFAAELLLGNFVRASSSVPSFTPN--NGGSASSA-VKPLPIKKEETN----SKNSSMKPRFALELDGLNCFETLVPN
        MNSMFS FDAFAAE+LLG FV AS+SVPSFTPN   GGSASSA VK +P KKEE N    SKNS MKPRFALELDGLNCFETLVPN
Subjt:  MNSMFSLFDAFAAELLLGNFVRASSSVPSFTPN--NGGSASSA-VKPLPIKKEETN----SKNSSMKPRFALELDGLNCFETLVPN
XP_023522684.1 uncharacterized protein LOC111786686 [Cucurbita pepo subsp. pepo]4.1e-2377.91Show/hide
Query:  MNSMFSLFDAFAAELLLGNFVRASSSVPSFTPN--NGGSASSA-VKPLPIKKEETN----SKNSSMKPRFALELDGLNCFETLVPN
        MNSMFS FDAFAAE+L+G FV AS+SVPSFTPN   GGSASSA VK +P KK+E N    SKNSSMKPRFALELDGLNCFETLVPN
Subjt:  MNSMFSLFDAFAAELLLGNFVRASSSVPSFTPN--NGGSASSA-VKPLPIKKEETN----SKNSSMKPRFALELDGLNCFETLVPN
TrEMBL top hitse value%identityAlignment
A0A0A0KJT8 Uncharacterized protein1.2e-2582.5Show/hide
Query:  MNSMFSLFDAFAAELLLGNFVRASSSVPSFTPNNGGSASSAVKPLPIKK-EETNSKNSSMKPRFALELDGLNCFETLVPN
        MNSMFSLFDAFAAE LLGNFVRASSSVPSFTPNN  ++ +  KPLP KK EE  SKNS MKPRFALELDGLNCFETLVPN
Subjt:  MNSMFSLFDAFAAELLLGNFVRASSSVPSFTPNNGGSASSAVKPLPIKK-EETNSKNSSMKPRFALELDGLNCFETLVPN
A0A5C7H1W0 Uncharacterized protein1.3e-0650Show/hide
Query:  MNSMFSLFDAFAAELLLGNFVRAS-------SSVPSFTPNNGGSASSAVKPLPIKKEETNSKNSSMKPRFALELDGLNCFETLV
        MNS+FS FDAF+AE LLG  VR S       SS  +   NN  +  S      +   +  S +SS KPRFA ELDGLNCFETLV
Subjt:  MNSMFSLFDAFAAELLLGNFVRAS-------SSVPSFTPNNGGSASSAVKPLPIKKEETNSKNSSMKPRFALELDGLNCFETLV
A0A5D3C6N3 Uncharacterized protein2.6e-2382.14Show/hide
Query:  MNSMFSLFDAFAAELLLG-NFVRASSSVPSFTP--NNGGSASSAV-KPLPI-KKEETNSKNSSMKPRFALELDGLNCFETLVPN
        MNSMFSLFDAFAAE LLG NFVRASSS+PSFTP  NN  +ASSAV KPLP  KKEE   KNSS+KPRFALELDGLNCFETLVPN
Subjt:  MNSMFSLFDAFAAELLLG-NFVRASSSVPSFTP--NNGGSASSAV-KPLPI-KKEETNSKNSSMKPRFALELDGLNCFETLVPN
A0A6J1E0L6 uncharacterized protein LOC1110260662.1e-0953.66Show/hide
Query:  MNSMFSLFDAFAAELLLGNFVRASSSVPSFTPNNGGSAS-----SAVKPLPIKKEETNSKNSSMKPRFALELDGLNCFETLV
        MNSMFSLFDAFAAELL+    RASS   SF PNNG   S     S   P  +++ ++N  +    PR A E DGLNCFETLV
Subjt:  MNSMFSLFDAFAAELLLGNFVRASSSVPSFTPNNGGSAS-----SAVKPLPIKKEETNSKNSSMKPRFALELDGLNCFETLV
A0A6J1EM23 uncharacterized protein LOC1114357662.6e-2379.07Show/hide
Query:  MNSMFSLFDAFAAELLLGNFVRASSSVPSFTPN--NGGSASSA-VKPLPIKKEETN----SKNSSMKPRFALELDGLNCFETLVPN
        MNSMFS FDAFAAE+LLG FV AS+SVPSFTPN   GGSASSA VK +P KKEE N    SKNS MKPRFALELDGLNCFETLVPN
Subjt:  MNSMFSLFDAFAAELLLGNFVRASSSVPSFTPN--NGGSASSA-VKPLPIKKEETN----SKNSSMKPRFALELDGLNCFETLVPN
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G32920.1 unknown protein3.3e-0743.02Show/hide
Query:  MNSMFSLFDAFAAELLLGNFVRASSSVPSFTPNNGGSASSAVKPLPIKKEETNSK-NSSMK--------PRFALELDGLNCFETLV
        MNSMFS FDA  AE++  N + +     SFT     + ++  KP    + +T  K N+S K        PRFALELDGL+CFET+V
Subjt:  MNSMFSLFDAFAAELLLGNFVRASSSVPSFTPNNGGSASSAVKPLPIKKEETNSK-NSSMK--------PRFALELDGLNCFETLV
AT1G32928.1 unknown protein4.2e-1050.6Show/hide
Query:  MNSMFSLFDAFAAELLLGNFVRASSSVPSFTPNNGGSASSA---VKPLPIKKEETNSKNSSM---KPRFALELDGLNCFETLV
        MNSMFS FDA  AE ++G  V A+S V     N+  S+SS       L +KK+E  SKN  +    PRFALELDGL+CFET+V
Subjt:  MNSMFSLFDAFAAELLLGNFVRASSSVPSFTPNNGGSASSA---VKPLPIKKEETNSKNSSM---KPRFALELDGLNCFETLV

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATTCCATGTTCAGTTTATTCGATGCCTTCGCCGCCGAATTGCTCCTCGGCAATTTCGTTAGGGCTTCTTCCTCTGTACCTTCCTTCACTCCCAACAATGGCGGCTC
TGCCTCTTCCGCCGTGAAGCCACTGCCGATCAAGAAAGAAGAAACGAATTCCAAGAATTCGTCGATGAAGCCGAGATTTGCTCTGGAGTTAGATGGCCTCAATTGCTTTG
AGACTCTCGTCCCGAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGAATTCCATGTTCAGTTTATTCGATGCCTTCGCCGCCGAATTGCTCCTCGGCAATTTCGTTAGGGCTTCTTCCTCTGTACCTTCCTTCACTCCCAACAATGGCGGCTC
TGCCTCTTCCGCCGTGAAGCCACTGCCGATCAAGAAAGAAGAAACGAATTCCAAGAATTCGTCGATGAAGCCGAGATTTGCTCTGGAGTTAGATGGCCTCAATTGCTTTG
AGACTCTCGTCCCGAATTGA
Protein sequenceShow/hide protein sequence
MNSMFSLFDAFAAELLLGNFVRASSSVPSFTPNNGGSASSAVKPLPIKKEETNSKNSSMKPRFALELDGLNCFETLVPN