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Lsi09G001270 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi09G001270
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr09:1233809..1234916
RNA-Seq ExpressionLsi09G001270
SyntenyLsi09G001270
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0042639.1 uncharacterized protein E6C27_scaffold44G001370 [Cucumis melo var. makuwa]2.2e-2782.61Show/hide
Query:  MKGSCTLLASVLAASTMAFSSSSSSSSSGDRDLALYPPSQQ----------GFVSESGANRGCGSDSSSEKEKFAPRFDGLRFIETLVTAHR
        MKGSCTLLASVLAASTMAF  SSSSSS+GDRDL LYPPS Q          GFVSESGANRGCG+DSSSEKEKFAPRFDGLRFIETLVTAHR
Subjt:  MKGSCTLLASVLAASTMAFSSSSSSSSSGDRDLALYPPSQQ----------GFVSESGANRGCGSDSSSEKEKFAPRFDGLRFIETLVTAHR

KAG7035524.1 hypothetical protein SDJN02_02320 [Cucurbita argyrosperma subsp. argyrosperma]7.5e-2890.24Show/hide
Query:  MKGSCTLLASVLAASTMAFSSSSSSSSSGDRDLALYPPSQQGFVSESGANRGCGSDSSSEKEKFAPRFDGLRFIETLVTAHR
        MKG+CTLLASVLAASTMAF SSSSSSSSGDRDLALYPPS +G VS+S ANRGCGSDSSSEKEKFAPRFDGL+FIETLVTAHR
Subjt:  MKGSCTLLASVLAASTMAFSSSSSSSSSGDRDLALYPPSQQGFVSESGANRGCGSDSSSEKEKFAPRFDGLRFIETLVTAHR

XP_008437456.1 PREDICTED: uncharacterized protein LOC103482871 [Cucumis melo]3.0e-2991.46Show/hide
Query:  MKGSCTLLASVLAASTMAFSSSSSSSSSGDRDLALYPPSQQGFVSESGANRGCGSDSSSEKEKFAPRFDGLRFIETLVTAHR
        MKGSCTLLASVLAASTMAF  SSSSSS+GDRDL LYPPS QGFV ESGANRGCG+DSSSEKEKFAPRFDGLRFIETLVTAHR
Subjt:  MKGSCTLLASVLAASTMAFSSSSSSSSSGDRDLALYPPSQQGFVSESGANRGCGSDSSSEKEKFAPRFDGLRFIETLVTAHR

XP_022929045.1 uncharacterized protein LOC111435756 [Cucurbita moschata]2.0e-2890.24Show/hide
Query:  MKGSCTLLASVLAASTMAFSSSSSSSSSGDRDLALYPPSQQGFVSESGANRGCGSDSSSEKEKFAPRFDGLRFIETLVTAHR
        MKGSCTLLASVLAASTMAFSSSSSSS+  DRDLAL PPS++GFVSESG+NRGCGSDSS+EKEKFAPRFDGLRFIETLVTAHR
Subjt:  MKGSCTLLASVLAASTMAFSSSSSSSSSGDRDLALYPPSQQGFVSESGANRGCGSDSSSEKEKFAPRFDGLRFIETLVTAHR

XP_023520500.1 uncharacterized protein LOC111783920 [Cucurbita pepo subsp. pepo]4.4e-2889.02Show/hide
Query:  MKGSCTLLASVLAASTMAFSSSSSSSSSGDRDLALYPPSQQGFVSESGANRGCGSDSSSEKEKFAPRFDGLRFIETLVTAHR
        MKGSCTLLASVLAASTMAFSSSSSSS+  DRDLAL PPS++GFVSESG+NRGCGSD+S+EKEKFAPRFDGLRFIETLVTAHR
Subjt:  MKGSCTLLASVLAASTMAFSSSSSSSSSGDRDLALYPPSQQGFVSESGANRGCGSDSSSEKEKFAPRFDGLRFIETLVTAHR

TrEMBL top hitse value%identityAlignment
A0A0A0KQK5 Uncharacterized protein4.3e-2991.67Show/hide
Query:  MKGSCTLLASVLAASTMAFSSSSSSSSS--GDRDLALYPPSQQGFVSESGANRGCGSDSSSEKEKFAPRFDGLRFIETLVTAHR
        MKGSCTLLASVLAASTMAFSSSSSSSSS  GDRDL LY  S QGFVSESGANRGCG+DSSSEKEKFAPRFDGLRFIETLVTAHR
Subjt:  MKGSCTLLASVLAASTMAFSSSSSSSSS--GDRDLALYPPSQQGFVSESGANRGCGSDSSSEKEKFAPRFDGLRFIETLVTAHR

A0A1S3AU25 uncharacterized protein LOC1034828711.5e-2991.46Show/hide
Query:  MKGSCTLLASVLAASTMAFSSSSSSSSSGDRDLALYPPSQQGFVSESGANRGCGSDSSSEKEKFAPRFDGLRFIETLVTAHR
        MKGSCTLLASVLAASTMAF  SSSSSS+GDRDL LYPPS QGFV ESGANRGCG+DSSSEKEKFAPRFDGLRFIETLVTAHR
Subjt:  MKGSCTLLASVLAASTMAFSSSSSSSSSGDRDLALYPPSQQGFVSESGANRGCGSDSSSEKEKFAPRFDGLRFIETLVTAHR

A0A5A7TMP9 Uncharacterized protein1.1e-2782.61Show/hide
Query:  MKGSCTLLASVLAASTMAFSSSSSSSSSGDRDLALYPPSQQ----------GFVSESGANRGCGSDSSSEKEKFAPRFDGLRFIETLVTAHR
        MKGSCTLLASVLAASTMAF  SSSSSS+GDRDL LYPPS Q          GFVSESGANRGCG+DSSSEKEKFAPRFDGLRFIETLVTAHR
Subjt:  MKGSCTLLASVLAASTMAFSSSSSSSSSGDRDLALYPPSQQ----------GFVSESGANRGCGSDSSSEKEKFAPRFDGLRFIETLVTAHR

A0A6J1ET49 uncharacterized protein LOC1114357569.5e-2990.24Show/hide
Query:  MKGSCTLLASVLAASTMAFSSSSSSSSSGDRDLALYPPSQQGFVSESGANRGCGSDSSSEKEKFAPRFDGLRFIETLVTAHR
        MKGSCTLLASVLAASTMAFSSSSSSS+  DRDLAL PPS++GFVSESG+NRGCGSDSS+EKEKFAPRFDGLRFIETLVTAHR
Subjt:  MKGSCTLLASVLAASTMAFSSSSSSSSSGDRDLALYPPSQQGFVSESGANRGCGSDSSSEKEKFAPRFDGLRFIETLVTAHR

A0A6J1HZR1 uncharacterized protein LOC1114691109.5e-2990.24Show/hide
Query:  MKGSCTLLASVLAASTMAFSSSSSSSSSGDRDLALYPPSQQGFVSESGANRGCGSDSSSEKEKFAPRFDGLRFIETLVTAHR
        MKGSCTLLASVLAASTMAFSSSSSSS+  DRDLAL PPS++GFVSESG+NRGCGSDSS+EKEKFAPRFDGLRFIETLVTAHR
Subjt:  MKGSCTLLASVLAASTMAFSSSSSSSSSGDRDLALYPPSQQGFVSESGANRGCGSDSSSEKEKFAPRFDGLRFIETLVTAHR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G28290.1 unknown protein6.6e-0640Show/hide
Query:  LAASTMAFSSSSSSSSSGDRDLALYPPSQQGFVSESGA----NRGCGSDSSSEKEKFAPRFDGLRFIETLVTAHR
        + A++++ ++S+++ S+G  + ++   S +  +S   A     +  GS      EKFAPRFDGLRFIETLVTAHR
Subjt:  LAASTMAFSSSSSSSSSGDRDLALYPPSQQGFVSESGA----NRGCGSDSSSEKEKFAPRFDGLRFIETLVTAHR

AT5G42110.1 unknown protein1.1e-0546.34Show/hide
Query:  MKGSCTLLASVLAASTMAFSSSSSSSSSGDRDLALYPPSQQGFVSESGANRGCGSDSSSEKEKFAPRFDGLRFIETLVTAHR
        MK S  ++ASV+A ST A SSSS           + PP           N   GSD+      F PRFDGLRFIETLVTAHR
Subjt:  MKGSCTLLASVLAASTMAFSSSSSSSSSGDRDLALYPPSQQGFVSESGANRGCGSDSSSEKEKFAPRFDGLRFIETLVTAHR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAGGCTCCTGCACGTTGCTCGCCTCCGTCCTCGCTGCCTCCACCATGGCTTTCTCCTCTTCTTCTTCTTCCTCCTCCAGTGGAGATCGCGACCTCGCTCTTTATCC
TCCCTCTCAACAGGGCTTCGTTTCGGAATCTGGTGCGAATAGAGGTTGCGGCTCGGATTCGTCGTCGGAGAAGGAGAAATTTGCGCCGAGGTTTGATGGATTGAGATTCA
TTGAGACTTTGGTAACTGCTCATAGATAA
mRNA sequenceShow/hide mRNA sequence
CCAAATTCAATTTTATTAAATCATGAAATTTCCCAAGTGCAAAATAAAAACACGCCACAACCGCTGAAAAATATAAGAATTAAAACCCCCACCCATCCGATCTTTTGCGC
TTTGAGGTCAATTTTCAGCGGCGCGTACAAAAGTTTCATCGCCGATCCTCTTCCTCATTCCCTCCTTAATCGGCCGAGATCCGACGACCGTCGTCGGATTTCGCCACCAC
CGTTCCACCAACCATGAAAGGCTCCTGCACGTTGCTCGCCTCCGTCCTCGCTGCCTCCACCATGGCTTTCTCCTCTTCTTCTTCTTCCTCCTCCAGTGGAGATCGCGACC
TCGCTCTTTATCCTCCCTCTCAACAGGGCTTCGTTTCGGAATCTGGTGCGAATAGAGGTTGCGGCTCGGATTCGTCGTCGGAGAAGGAGAAATTTGCGCCGAGGTTTGAT
GGATTGAGATTCATTGAGACTTTGGTAACTGCTCATAGATAATAATCCAATCCCTAAGAGGCATGTCCTCGTTCTTTCTCTTAATCTATATTGCGGATCGTATTCTGTTT
CATATGATTATTAGGAAGATAAATTTTGTTTTTACATTTTGTGGATTGATTTTACTGACTTCAAGAAAAAAAGAAAAAAGAAAAATCAAGAGATTTTGTGCGAGTTCCTC
TTGTTTGTAACGGAGTTTCATTGTTGTAAGAATTGAAAAATTCATGGATGAATTTGAATGATCTGTCTGTGTGTTTGAGAATATGAAGAATATTCCTTAGAACCTTTAAT
TATATTTAATTATAAAAGATAATTCATTGAGTAAATTAATGAAATTAGTGGCTTCTCTTTGGAATTTCCATTGCTGATGTTTAAAGATTTAGATGAAGACAAAATGGTGA
AAGGAAAGCAGAAAAGCAGGGGGGAATTAATTAAATCAGTTTGATGCCTTTTGAACAACTCATTTTTGGTATTTGTATGATGATGATGATGAAATCTCAGGAGTTTGTCT
TTTTGTT
Protein sequenceShow/hide protein sequence
MKGSCTLLASVLAASTMAFSSSSSSSSSGDRDLALYPPSQQGFVSESGANRGCGSDSSSEKEKFAPRFDGLRFIETLVTAHR