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Lsi09G001810 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi09G001810
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionGH15683
Genome locationchr09:1899192..1901780
RNA-Seq ExpressionLsi09G001810
SyntenyLsi09G001810
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0042689.1 uncharacterized protein E6C27_scaffold44G001870 [Cucumis melo var. makuwa]8.9e-1671.43Show/hide
Query:  MASLHCNKPADHGHGRHQQKHDQQH-HHCFGGHVSDKITGVF-KGHHHGQAPPASVWAPEHHFANAAYCK
        MA   C KPADH HG+HQQKHDQQH HHCFGGHVSDKI GVF KGHHH QA PAS     HH AN ++CK
Subjt:  MASLHCNKPADHGHGRHQQKHDQQH-HHCFGGHVSDKITGVF-KGHHHGQAPPASVWAPEHHFANAAYCK

VAI04104.1 unnamed protein product [Triticum turgidum subsp. durum]1.5e-0736.93Show/hide
Query:  ISALEPVHHFANVGYWKPAHHHGQAPPASASASVHHFANAGYCKPAHHH-DQAPPASASALVHHSADAGYCKPAHHHDQA-PPASASALVHHSADAGYCK
        +S+    HH A V    P++H   + PA++S   HH   A    P+HHH     PASA A  H     GY  PAHHH  A  P+ A    HH  DA    
Subjt:  ISALEPVHHFANVGYWKPAHHHGQAPPASASASVHHFANAGYCKPAHHH-DQAPPASASALVHHSADAGYCKPAHHHDQA-PPASASALVHHSADAGYCK

Query:  PAHH-HGQAPPASTSACTCKPAH--HHGQAPPASASACTYKPAHHHGQDPPASTPVHHSTNAGYCKPAGSNKKEHH
        P+HH H Q  P+   A    PAH  HH  AP AS         HHH     A  P H   + G+  PA S  + HH
Subjt:  PAHH-HGQAPPASTSACTCKPAH--HHGQAPPASASACTYKPAHHHGQDPPASTPVHHSTNAGYCKPAGSNKKEHH

XP_008437383.1 PREDICTED: uncharacterized protein LOC103482815 [Cucumis melo]8.9e-1671.43Show/hide
Query:  MASLHCNKPADHGHGRHQQKHDQQH-HHCFGGHVSDKITGVF-KGHHHGQAPPASVWAPEHHFANAAYCK
        MA   C KPADH HG+HQQKHDQQH HHCFGGHVSDKI GVF KGHHH QA PAS     HH AN ++CK
Subjt:  MASLHCNKPADHGHGRHQQKHDQQH-HHCFGGHVSDKITGVF-KGHHHGQAPPASVWAPEHHFANAAYCK

XP_038875375.1 uncharacterized protein LOC120067846 [Benincasa hispida]6.0e-2079.71Show/hide
Query:  MASLHCNKPADHGHGRHQQKHDQQHHHCFGGHVSDKITGVFKGHHHGQAPPASVWAPEHHFANAAYCKP
        MASL CNKPADH     QQKHDQQHHHCFGGHVSDKI GVFKGHHHGQAP AS  AP HH ANA++CKP
Subjt:  MASLHCNKPADHGHGRHQQKHDQQHHHCFGGHVSDKITGVFKGHHHGQAPPASVWAPEHHFANAAYCKP

XP_040256393.1 histidine-rich glycoprotein-like [Aegilops tauschii subsp. strangulata]1.7e-0639.13Show/hide
Query:  HHHGQAPPASASASVHHFANAGYCKPAHHHDQAPPASASALVHHSADAGYCKPAHHHDQAPPASASALVHHSADAGYCKPAHHHGQAPPASTSACTCKPA
        HHH    PA A +  HH  +      AHHH  AP  S S   HH A A      HHH  AP  S S   HH A A    P+HHH   PPA +      P+
Subjt:  HHHGQAPPASASASVHHFANAGYCKPAHHHDQAPPASASALVHHSADAGYCKPAHHHDQAPPASASALVHHSADAGYCKPAHHHGQAPPASTSACTCKPA

Query:  HHHGQAPPASASACTYKPAHHHGQDPPASTPVHHSTNA
        HHH    PA +      P+HHH    PA +P+HH   A
Subjt:  HHHGQAPPASASACTYKPAHHHGQDPPASTPVHHSTNA

TrEMBL top hitse value%identityAlignment
A0A080YUY5 Uncharacterized protein1.7e-0434.44Show/hide
Query:  ISALEPVHHFANVGYWKPAHHHGQAPPASASASVHHFANAGYCKPA-----HHHDQAPPASASALVHHSADAGYCKPAHH-HDQAPPASASALVHHSADA
        +S+    HH A        HHHG   P+SA A  H   + G+  PA     HHH    P+SA    H+   A    P HH H    PA      HH  DA
Subjt:  ISALEPVHHFANVGYWKPAHHHGQAPPASASASVHHFANAGYCKPA-----HHHDQAPPASASALVHHSADAGYCKPAHH-HDQAPPASASALVHHSADA

Query:  GYCKPAHH-HGQAPPASTSACTCKPAH--HHGQAPPASASACTYKPAHHHGQDPPASTPVHHSTNAGYCKPAGSNKKEHH
            P+HH H Q  P+   A    PAH  HH  AP AS         HHH     A  P H   + G+  PA S  + HH
Subjt:  GYCKPAHH-HGQAPPASTSACTCKPAH--HHGQAPPASASACTYKPAHHHGQDPPASTPVHHSTNAGYCKPAGSNKKEHH

A0A1S3AUH3 uncharacterized protein LOC1034828154.3e-1671.43Show/hide
Query:  MASLHCNKPADHGHGRHQQKHDQQH-HHCFGGHVSDKITGVF-KGHHHGQAPPASVWAPEHHFANAAYCK
        MA   C KPADH HG+HQQKHDQQH HHCFGGHVSDKI GVF KGHHH QA PAS     HH AN ++CK
Subjt:  MASLHCNKPADHGHGRHQQKHDQQH-HHCFGGHVSDKITGVF-KGHHHGQAPPASVWAPEHHFANAAYCK

A0A446RZ56 Uncharacterized protein7.4e-0836.93Show/hide
Query:  ISALEPVHHFANVGYWKPAHHHGQAPPASASASVHHFANAGYCKPAHHH-DQAPPASASALVHHSADAGYCKPAHHHDQA-PPASASALVHHSADAGYCK
        +S+    HH A V    P++H   + PA++S   HH   A    P+HHH     PASA A  H     GY  PAHHH  A  P+ A    HH  DA    
Subjt:  ISALEPVHHFANVGYWKPAHHHGQAPPASASASVHHFANAGYCKPAHHH-DQAPPASASALVHHSADAGYCKPAHHHDQA-PPASASALVHHSADAGYCK

Query:  PAHH-HGQAPPASTSACTCKPAH--HHGQAPPASASACTYKPAHHHGQDPPASTPVHHSTNAGYCKPAGSNKKEHH
        P+HH H Q  P+   A    PAH  HH  AP AS         HHH     A  P H   + G+  PA S  + HH
Subjt:  PAHH-HGQAPPASTSACTCKPAH--HHGQAPPASASACTYKPAHHHGQDPPASTPVHHSTNAGYCKPAGSNKKEHH

A0A5A7TMV4 Uncharacterized protein4.3e-1671.43Show/hide
Query:  MASLHCNKPADHGHGRHQQKHDQQH-HHCFGGHVSDKITGVF-KGHHHGQAPPASVWAPEHHFANAAYCK
        MA   C KPADH HG+HQQKHDQQH HHCFGGHVSDKI GVF KGHHH QA PAS     HH AN ++CK
Subjt:  MASLHCNKPADHGHGRHQQKHDQQH-HHCFGGHVSDKITGVF-KGHHHGQAPPASVWAPEHHFANAAYCK

A0A6J1CWW2 uncharacterized protein LOC1110153151.1e-0652.27Show/hide
Query:  MASLHCNKPADHGHGRHQQKHDQQHHHCFGGHVSDKITGVFKGH-HHGQAPPASVWAPEHHFANAAYCKPAHHHGQAPPASASAPVDH
        MASL C+KPAD  H ++ QKHDQ   HCF GHVSDKI GVFKGH HHGQAP A                 A HH     A+A+A V H
Subjt:  MASLHCNKPADHGHGRHQQKHDQQHHHCFGGHVSDKITGVFKGH-HHGQAPPASVWAPEHHFANAAYCKPAHHHGQAPPASASAPVDH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCATCTCTGCATTGCAACAAACCAGCTGATCATGGGCACGGCCGGCACCAGCAGAAGCATGACCAACAGCATCACCATTGCTTCGGCGGCCACGTCTCTGACAAGAT
CACAGGCGTCTTCAAAGGCCACCATCATGGCCAGGCTCCACCAGCATCAGTATGGGCGCCGGAGCACCACTTTGCCAATGCCGCCTACTGCAAGCCAGCCCACCATCATG
GCCAGGCTCCACCGGCATCGGCATCGGCGCCGGTGGACCACTTTGCCAATGCCGGCTACTGGAACCCAGCCTACCATCATGGCCAGGCTCCACTGATATCGGCATTGGAG
CCGGTGCACCACTTTGCCAATGTCGGCTACTGGAAGCCAGCCCACCATCATGGCCAGGCTCCACCGGCATCGGCATCGGCGTCGGTGCACCACTTTGCCAATGCCGGCTA
CTGCAAGCCAGCCCACCATCATGACCAGGCTCCACCGGCATCGGCATCGGCGCTAGTGCACCACTCTGCCGATGCCGGCTACTGCAAGCCAGCCCACCATCATGACCAGG
CTCCACCGGCATCGGCATCGGCGCTAGTGCACCACTCTGCCGATGCCGGCTACTGCAAGCCGGCCCACCATCATGGCCAGGCTCCACCGGCATCAACATCGGCGTGCACC
TGCAAGCCAGCCCACCATCATGGCCAGGCTCCACCGGCATCAGCATCGGCGTGCACCTACAAACCAGCCCACCATCATGGCCAGGATCCACCGGCATCGACGCCGGTGCA
CCACTCTACCAATGCCGGCTACTGCAAGCCAGCTGGGTCAAATAAGAAGGAACACCACAAGAATAGAGAAGGGGGTTTTCTTCATCAGATCAATGATGTCTGGTCTGAAA
GGTTGATGAGGACAAGGCCTACCATGTTGGGTATCTTGTTCTTTGGTCGGGTCCGGGTCGGGTTGGACTCTTTTATTGTTGAGTCGTGGAGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCATCTCTGCATTGCAACAAACCAGCTGATCATGGGCACGGCCGGCACCAGCAGAAGCATGACCAACAGCATCACCATTGCTTCGGCGGCCACGTCTCTGACAAGAT
CACAGGCGTCTTCAAAGGCCACCATCATGGCCAGGCTCCACCAGCATCAGTATGGGCGCCGGAGCACCACTTTGCCAATGCCGCCTACTGCAAGCCAGCCCACCATCATG
GCCAGGCTCCACCGGCATCGGCATCGGCGCCGGTGGACCACTTTGCCAATGCCGGCTACTGGAACCCAGCCTACCATCATGGCCAGGCTCCACTGATATCGGCATTGGAG
CCGGTGCACCACTTTGCCAATGTCGGCTACTGGAAGCCAGCCCACCATCATGGCCAGGCTCCACCGGCATCGGCATCGGCGTCGGTGCACCACTTTGCCAATGCCGGCTA
CTGCAAGCCAGCCCACCATCATGACCAGGCTCCACCGGCATCGGCATCGGCGCTAGTGCACCACTCTGCCGATGCCGGCTACTGCAAGCCAGCCCACCATCATGACCAGG
CTCCACCGGCATCGGCATCGGCGCTAGTGCACCACTCTGCCGATGCCGGCTACTGCAAGCCGGCCCACCATCATGGCCAGGCTCCACCGGCATCAACATCGGCGTGCACC
TGCAAGCCAGCCCACCATCATGGCCAGGCTCCACCGGCATCAGCATCGGCGTGCACCTACAAACCAGCCCACCATCATGGCCAGGATCCACCGGCATCGACGCCGGTGCA
CCACTCTACCAATGCCGGCTACTGCAAGCCAGCTGGGTCAAATAAGAAGGAACACCACAAGAATAGAGAAGGGGGTTTTCTTCATCAGATCAATGATGTCTGGTCTGAAA
GGTTGATGAGGACAAGGCCTACCATGTTGGGTATCTTGTTCTTTGGTCGGGTCCGGGTCGGGTTGGACTCTTTTATTGTTGAGTCGTGGAGCTAA
Protein sequenceShow/hide protein sequence
MASLHCNKPADHGHGRHQQKHDQQHHHCFGGHVSDKITGVFKGHHHGQAPPASVWAPEHHFANAAYCKPAHHHGQAPPASASAPVDHFANAGYWNPAYHHGQAPLISALE
PVHHFANVGYWKPAHHHGQAPPASASASVHHFANAGYCKPAHHHDQAPPASASALVHHSADAGYCKPAHHHDQAPPASASALVHHSADAGYCKPAHHHGQAPPASTSACT
CKPAHHHGQAPPASASACTYKPAHHHGQDPPASTPVHHSTNAGYCKPAGSNKKEHHKNREGGFLHQINDVWSERLMRTRPTMLGILFFGRVRVGLDSFIVESWS