; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi09G001890 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi09G001890
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionNucleotide-sugar transporter
Genome locationchr09:1968315..1968575
RNA-Seq ExpressionLsi09G001890
SyntenyLsi09G001890
Gene Ontology termsGO:0008643 - carbohydrate transport (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0042696.1 hypothetical protein E6C27_scaffold44G001940 [Cucumis melo var. makuwa]4.3e-3483.95Show/hide
Query:  SCIDVARCSVIGSEHQQRSSKPFDQFQMPLQYPRYKRSDYEGMPEWKLDCLLKEYGLPVAGDIAHKRKFAIGAFLWPSEMY
        SC D ARCS+IGSEHQQRSSK  DQFQMPL YPRYKRSDYE MPEWKLDCLLKEYGLP+ GD+A KRKFA+GAFLWP EMY
Subjt:  SCIDVARCSVIGSEHQQRSSKPFDQFQMPLQYPRYKRSDYEGMPEWKLDCLLKEYGLPVAGDIAHKRKFAIGAFLWPSEMY

KAE8647840.1 hypothetical protein Csa_000107 [Cucumis sativus]4.3e-3485Show/hide
Query:  SCIDVARCSVIGSEHQQRSSKPFDQFQMPLQYPRYKRSDYEGMPEWKLDCLLKEYGLPVAGDIAHKRKFAIGAFLWPSEM
        SC D ARCS+IGSEHQQRSSK FDQFQMPL YPRY+RSDYEGMPEWKLDCLLKEYGLPV GD+A KRKFA+GAFLWP E+
Subjt:  SCIDVARCSVIGSEHQQRSSKPFDQFQMPLQYPRYKRSDYEGMPEWKLDCLLKEYGLPVAGDIAHKRKFAIGAFLWPSEM

KAG6606051.1 hypothetical protein SDJN03_03368, partial [Cucurbita argyrosperma subsp. sororia]1.9e-2972.53Show/hide
Query:  MSGITSCIDVARCSVIGSEHQQRS-----SKPFDQFQMPLQYPRYKRSDYEGMPEWKLDCLLKEYGLPVAGDIAHKRKFAIGAFLWPSEMY
        MS I S +  ARC+VIG+E  Q+      SK FD FQMPL YP+YKRSDYEGM EWKLDCLLKEYGLPVAGD+A KRKFA+GAFLWPSEMY
Subjt:  MSGITSCIDVARCSVIGSEHQQRS-----SKPFDQFQMPLQYPRYKRSDYEGMPEWKLDCLLKEYGLPVAGDIAHKRKFAIGAFLWPSEMY

KAG7035999.1 hypothetical protein SDJN02_02799, partial [Cucurbita argyrosperma subsp. argyrosperma]3.2e-2970.97Show/hide
Query:  MSGITSCIDVARCSVIGSEHQQRS-------SKPFDQFQMPLQYPRYKRSDYEGMPEWKLDCLLKEYGLPVAGDIAHKRKFAIGAFLWPSEMY
        MS I S +  ARC+VIG+E  Q+        SK FD FQMPL YP+YKRSDYEGM EWKLDCLLKEYGLPVAGD+A KRKFA+GAFLWPSEMY
Subjt:  MSGITSCIDVARCSVIGSEHQQRS-------SKPFDQFQMPLQYPRYKRSDYEGMPEWKLDCLLKEYGLPVAGDIAHKRKFAIGAFLWPSEMY

XP_022958391.1 uncharacterized protein LOC111459627 [Cucurbita moschata]2.2e-3072.83Show/hide
Query:  MSGITSCIDVARCSVIGSEHQQRS------SKPFDQFQMPLQYPRYKRSDYEGMPEWKLDCLLKEYGLPVAGDIAHKRKFAIGAFLWPSEMY
        MS I S +D ARC+VIG+E  Q+       SK FD FQMPL YP+YKRSDYEGM EWKLDCLLKEYGLPVAGD+A KRKFA+GAFLWPSEMY
Subjt:  MSGITSCIDVARCSVIGSEHQQRS------SKPFDQFQMPLQYPRYKRSDYEGMPEWKLDCLLKEYGLPVAGDIAHKRKFAIGAFLWPSEMY

TrEMBL top hitse value%identityAlignment
A0A0A0KMG0 Uncharacterized protein9.0e-3886.05Show/hide
Query:  MSGITSCIDVARCSVIGSEHQQRSSKPFDQFQMPLQYPRYKRSDYEGMPEWKLDCLLKEYGLPVAGDIAHKRKFAIGAFLWPSEMY
        MSGI SC D ARCS+IGSEHQQRSSK FDQFQMPL YPRY+RSDYEGMPEWKLDCLLKEYGLPV GD+A KRKFA+GAFLWP EMY
Subjt:  MSGITSCIDVARCSVIGSEHQQRSSKPFDQFQMPLQYPRYKRSDYEGMPEWKLDCLLKEYGLPVAGDIAHKRKFAIGAFLWPSEMY

A0A5D3C447 Uncharacterized protein2.1e-3483.95Show/hide
Query:  SCIDVARCSVIGSEHQQRSSKPFDQFQMPLQYPRYKRSDYEGMPEWKLDCLLKEYGLPVAGDIAHKRKFAIGAFLWPSEMY
        SC D ARCS+IGSEHQQRSSK  DQFQMPL YPRYKRSDYE MPEWKLDCLLKEYGLP+ GD+A KRKFA+GAFLWP EMY
Subjt:  SCIDVARCSVIGSEHQQRSSKPFDQFQMPLQYPRYKRSDYEGMPEWKLDCLLKEYGLPVAGDIAHKRKFAIGAFLWPSEMY

A0A6J1CXF4 uncharacterized protein LOC1110153218.7e-2576.47Show/hide
Query:  EHQQRSSKPFDQFQMPLQYPRYKRSDYEGMPEWKLDCLLKEYGLPVAGDIAHKRKFAIGAFLWPSEMY
        + QQR SK F QFQMPL YPRYK+SDYE MPEWKLDCLLKEYGLP+ GD+A KRKFA+GAFLWP + Y
Subjt:  EHQQRSSKPFDQFQMPLQYPRYKRSDYEGMPEWKLDCLLKEYGLPVAGDIAHKRKFAIGAFLWPSEMY

A0A6J1H1Y5 uncharacterized protein LOC1114596271.1e-3072.83Show/hide
Query:  MSGITSCIDVARCSVIGSEHQQRS------SKPFDQFQMPLQYPRYKRSDYEGMPEWKLDCLLKEYGLPVAGDIAHKRKFAIGAFLWPSEMY
        MS I S +D ARC+VIG+E  Q+       SK FD FQMPL YP+YKRSDYEGM EWKLDCLLKEYGLPVAGD+A KRKFA+GAFLWPSEMY
Subjt:  MSGITSCIDVARCSVIGSEHQQRS------SKPFDQFQMPLQYPRYKRSDYEGMPEWKLDCLLKEYGLPVAGDIAHKRKFAIGAFLWPSEMY

A0A7J7GD32 Uncharacterized protein3.4e-2172.31Show/hide
Query:  HQQRSSKPFDQFQMPLQYPRYKRSDYEGMPEWKLDCLLKEYGLPVAGDIAHKRKFAIGAFLWPSE
        HQQ+  K    FQMPL YPRYK+SDYE MPEWKLDCLL +YGL V+GDI+HKR FA+GAFLWPS+
Subjt:  HQQRSSKPFDQFQMPLQYPRYKRSDYEGMPEWKLDCLLKEYGLPVAGDIAHKRKFAIGAFLWPSE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G09950.1 unknown protein2.9e-1255.17Show/hide
Query:  PFDQFQMPLQYPRYKRSDYEGMPEWKLDCLLKEYGLPVAGD--IAHKRKFAIGAFLWP
        P   F+MPL YPRY + DYE M EW+LD LL EYGL    D  +  KR FAI  F+WP
Subjt:  PFDQFQMPLQYPRYKRSDYEGMPEWKLDCLLKEYGLPVAGD--IAHKRKFAIGAFLWP

AT3G11405.1 unknown protein2.4e-1155.93Show/hide
Query:  SSKPFDQFQMPLQYPRYKRSDYEGMPEWKLDCLLKEYGLPV-AGDIAHKRKFAIGAFLW
        SS P   FQMPLQYP Y +  Y+ M E +LD LLK YGLP   G+++ K++FA+GAFLW
Subjt:  SSKPFDQFQMPLQYPRYKRSDYEGMPEWKLDCLLKEYGLPV-AGDIAHKRKFAIGAFLW

AT3G55570.1 unknown protein2.3e-1767.92Show/hide
Query:  FQMPLQYPRYKRSDYEGMPEWKLDCLLKEYGLPVAGDIAHKRKFAIGAFLWPS
        F+MPL YPRY + DY+ MPEWKLD +L +YGL   GD+AHKR FAIGAFLW S
Subjt:  FQMPLQYPRYKRSDYEGMPEWKLDCLLKEYGLPVAGDIAHKRKFAIGAFLWPS

AT5G41761.1 unknown protein4.1e-1969.35Show/hide
Query:  KPFDQ---FQMPLQYPRYKRSDYEGMPEWKLDCLLKEYGLPVAGDIAHKRKFAIGAFLWPSE
        KP +Q   FQ+PL YP+Y +SDYE MPEW+LD LL+EYGLPV GD   KRKFAIGAFLW SE
Subjt:  KPFDQ---FQMPLQYPRYKRSDYEGMPEWKLDCLLKEYGLPVAGDIAHKRKFAIGAFLWPSE

AT5G55620.1 unknown protein9.9e-1352.73Show/hide
Query:  FQMPLQYPRYKRSDYEGMPEWKLDCLLKEYGLPVAGDIAHKRKFAIGAFLWPSEM
        FQ+PL YP+Y +SDYE M + +LD LLK+YG    G +  KR FAI +FLWP ++
Subjt:  FQMPLQYPRYKRSDYEGMPEWKLDCLLKEYGLPVAGDIAHKRKFAIGAFLWPSEM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCGGAATAACGAGCTGCATCGATGTTGCTCGGTGCTCTGTGATCGGGTCGGAGCATCAGCAGCGATCGAGCAAACCGTTCGATCAGTTTCAAATGCCTCTTCAGTA
CCCAAGGTACAAGAGGAGTGACTATGAGGGCATGCCAGAGTGGAAACTGGACTGCCTTCTTAAAGAATATGGTCTACCGGTTGCCGGAGACATCGCCCACAAGCGAAAGT
TCGCCATCGGAGCTTTCCTTTGGCCTTCTGAAATGTACTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGCGGAATAACGAGCTGCATCGATGTTGCTCGGTGCTCTGTGATCGGGTCGGAGCATCAGCAGCGATCGAGCAAACCGTTCGATCAGTTTCAAATGCCTCTTCAGTA
CCCAAGGTACAAGAGGAGTGACTATGAGGGCATGCCAGAGTGGAAACTGGACTGCCTTCTTAAAGAATATGGTCTACCGGTTGCCGGAGACATCGCCCACAAGCGAAAGT
TCGCCATCGGAGCTTTCCTTTGGCCTTCTGAAATGTACTGA
Protein sequenceShow/hide protein sequence
MSGITSCIDVARCSVIGSEHQQRSSKPFDQFQMPLQYPRYKRSDYEGMPEWKLDCLLKEYGLPVAGDIAHKRKFAIGAFLWPSEMY