; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi09G002300 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi09G002300
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionSnoaL-like domain-containing protein
Genome locationchr09:2392179..2393970
RNA-Seq ExpressionLsi09G002300
SyntenyLsi09G002300
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008437322.1 PREDICTED: uncharacterized protein LOC103482777 isoform X1 [Cucumis melo]8.4e-2963.96Show/hide
Query:  NLFLQLY--LQAALGFLEELTESMGPDVKFKVHSVNEIGASKAGAFWHLEWKNMEIPLSKGCTFIDIRNEE-KTIKNVKISIEPQVKPGHLILATMKLVT
        +LF++ +   +AA+ F+E+LTESMGPDVKF++ +V E   S AGA WHLEW+NMEIPL+KGCTFIDIR+EE KTI+ V+I  E Q+K GHL LA MKLVT
Subjt:  NLFLQLY--LQAALGFLEELTESMGPDVKFKVHSVNEIGASKAGAFWHLEWKNMEIPLSKGCTFIDIRNEE-KTIKNVKISIEPQVKPGHLILATMKLVT

Query:  TLLAKYPAIPE
         LLAK+PAI E
Subjt:  TLLAKYPAIPE
XP_022929026.1 uncharacterized protein LOC111435747 [Cucurbita moschata]8.4e-2966.33Show/hide
Query:  QAALGFLEELTESMGPDVKFKVHSVNEIGASKAGAFWHLEWKNMEIPLSKGCTFIDIRNEEKTIKNVKISIEPQVKPGHLILATMKLVTTLLAKYPAI
        +AAL F +ELT+SMGPDVKF+  +V E GAS+AG  WHL WKN +IP +KGCTFI I NE++TI+  +I IEPQVK GHLIL  MKLVT+LLA+YPAI
Subjt:  QAALGFLEELTESMGPDVKFKVHSVNEIGASKAGAFWHLEWKNMEIPLSKGCTFIDIRNEEKTIKNVKISIEPQVKPGHLILATMKLVTTLLAKYPAI
XP_022970084.1 uncharacterized protein LOC111469081 [Cucurbita maxima]1.3e-2967.35Show/hide
Query:  QAALGFLEELTESMGPDVKFKVHSVNEIGASKAGAFWHLEWKNMEIPLSKGCTFIDIRNEEKTIKNVKISIEPQVKPGHLILATMKLVTTLLAKYPAI
        +AAL F +ELT+SMGPDVKF+  +V E G S+AGA WHL WKN +IP +KGCTFIDI NEE+TI+  +I +EPQVK GHLIL  MKLVT+LLA+YPAI
Subjt:  QAALGFLEELTESMGPDVKFKVHSVNEIGASKAGAFWHLEWKNMEIPLSKGCTFIDIRNEEKTIKNVKISIEPQVKPGHLILATMKLVTTLLAKYPAI
XP_023550969.1 uncharacterized protein LOC111808949 [Cucurbita pepo subsp. pepo]4.9e-2967.35Show/hide
Query:  QAALGFLEELTESMGPDVKFKVHSVNEIGASKAGAFWHLEWKNMEIPLSKGCTFIDIRNEEKTIKNVKISIEPQVKPGHLILATMKLVTTLLAKYPAI
        +AAL F EELT+SMG DVKF+  +V E G S+AGA WHL WKN +IP +KGCTFIDI NE++TI+  +I IEPQVK GHLIL  MKLVT+LLA+YPAI
Subjt:  QAALGFLEELTESMGPDVKFKVHSVNEIGASKAGAFWHLEWKNMEIPLSKGCTFIDIRNEEKTIKNVKISIEPQVKPGHLILATMKLVTTLLAKYPAI
XP_038906943.1 uncharacterized protein LOC120092809 [Benincasa hispida]1.9e-3368.47Show/hide
Query:  NLFLQLYL--QAALGFLEELTESMGPDVKFKVHSVNEIGASKAGAFWHLEWKNMEIPLSKGCTFIDIRNEE-KTIKNVKISIEPQVKPGHLILATMKLVT
        +LF++ ++  +AAL F EELT SMGPDVKF++H++ E   S  GA WHLEWKNMEIP +KGCTFIDIRNEE KTI+  +I IEPQ+K GHLILA MKLVT
Subjt:  NLFLQLYL--QAALGFLEELTESMGPDVKFKVHSVNEIGASKAGAFWHLEWKNMEIPLSKGCTFIDIRNEE-KTIKNVKISIEPQVKPGHLILATMKLVT

Query:  TLLAKYPAIPE
         LLAKYPAIPE
Subjt:  TLLAKYPAIPE
TrEMBL top hitse value%identityAlignment
A0A0A0KMI4 SnoaL-like domain-containing protein5.9e-2863.06Show/hide
Query:  NLFLQLY--LQAALGFLEELTESMGPDVKFKVHSVNEIGASKAGAFWHLEWKNMEIPLSKGCTFIDIRNEE-KTIKNVKISIEPQVKPGHLILATMKLVT
        +LF++ +   +AA+ F+E+LTESMGPDVKF++  V E   S AGA WHLEW+NMEIPL+KGCTFIDIR+EE KTI+ ++I  EPQ K GHLIL  MKLVT
Subjt:  NLFLQLY--LQAALGFLEELTESMGPDVKFKVHSVNEIGASKAGAFWHLEWKNMEIPLSKGCTFIDIRNEE-KTIKNVKISIEPQVKPGHLILATMKLVT

Query:  TLLAKYPAIPE
         LLAK  AI E
Subjt:  TLLAKYPAIPE
A0A1S3ATV9 uncharacterized protein LOC103482777 isoform X14.1e-2963.96Show/hide
Query:  NLFLQLY--LQAALGFLEELTESMGPDVKFKVHSVNEIGASKAGAFWHLEWKNMEIPLSKGCTFIDIRNEE-KTIKNVKISIEPQVKPGHLILATMKLVT
        +LF++ +   +AA+ F+E+LTESMGPDVKF++ +V E   S AGA WHLEW+NMEIPL+KGCTFIDIR+EE KTI+ V+I  E Q+K GHL LA MKLVT
Subjt:  NLFLQLY--LQAALGFLEELTESMGPDVKFKVHSVNEIGASKAGAFWHLEWKNMEIPLSKGCTFIDIRNEE-KTIKNVKISIEPQVKPGHLILATMKLVT

Query:  TLLAKYPAIPE
         LLAK+PAI E
Subjt:  TLLAKYPAIPE
A0A1S3AUC2 uncharacterized protein LOC103482777 isoform X27.7e-2866.34Show/hide
Query:  QAALGFLEELTESMGPDVKFKVHSVNEIGASKAGAFWHLEWKNMEIPLSKGCTFIDIRNEE-KTIKNVKISIEPQVKPGHLILATMKLVTTLLAKYPAIP
        +AA+ F+E+LTESMGPD+KF++  V E   S A A WHLEW+NMEIPL+KGCTFIDIR+EE KTI+ V+I  E Q+K GHL LA MKLVT LLAK+PAI 
Subjt:  QAALGFLEELTESMGPDVKFKVHSVNEIGASKAGAFWHLEWKNMEIPLSKGCTFIDIRNEE-KTIKNVKISIEPQVKPGHLILATMKLVTTLLAKYPAIP

Query:  E
        E
Subjt:  E
A0A6J1ELY0 uncharacterized protein LOC1114357474.1e-2966.33Show/hide
Query:  QAALGFLEELTESMGPDVKFKVHSVNEIGASKAGAFWHLEWKNMEIPLSKGCTFIDIRNEEKTIKNVKISIEPQVKPGHLILATMKLVTTLLAKYPAI
        +AAL F +ELT+SMGPDVKF+  +V E GAS+AG  WHL WKN +IP +KGCTFI I NE++TI+  +I IEPQVK GHLIL  MKLVT+LLA+YPAI
Subjt:  QAALGFLEELTESMGPDVKFKVHSVNEIGASKAGAFWHLEWKNMEIPLSKGCTFIDIRNEEKTIKNVKISIEPQVKPGHLILATMKLVTTLLAKYPAI
A0A6J1I4H1 uncharacterized protein LOC1114690816.3e-3067.35Show/hide
Query:  QAALGFLEELTESMGPDVKFKVHSVNEIGASKAGAFWHLEWKNMEIPLSKGCTFIDIRNEEKTIKNVKISIEPQVKPGHLILATMKLVTTLLAKYPAI
        +AAL F +ELT+SMGPDVKF+  +V E G S+AGA WHL WKN +IP +KGCTFIDI NEE+TI+  +I +EPQVK GHLIL  MKLVT+LLA+YPAI
Subjt:  QAALGFLEELTESMGPDVKFKVHSVNEIGASKAGAFWHLEWKNMEIPLSKGCTFIDIRNEEKTIKNVKISIEPQVKPGHLILATMKLVTTLLAKYPAI
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G71480.1 Nuclear transport factor 2 (NTF2) family protein1.6e-1435.29Show/hide
Query:  QAALGFLEELTESMGPDVKFKVHSVNEIGASKAGAFWHLEWKNMEIPLSKGCTF--IDIRNEEKTIKNVKISIEPQVKPGHLILATMKLVTTLLAKYPAI
        +A L F  +  ES   D++F +  ++   +S  G  WHLEWK    P SKGC+F  +++ + ++ I   +  +EP +KPG  +LA +K VT LL K+P +
Subjt:  QAALGFLEELTESMGPDVKFKVHSVNEIGASKAGAFWHLEWKNMEIPLSKGCTF--IDIRNEEKTIKNVKISIEPQVKPGHLILATMKLVTTLLAKYPAI

Query:  PE
         +
Subjt:  PE
AT5G41470.1 Nuclear transport factor 2 (NTF2) family protein2.3e-1641.84Show/hide
Query:  QAALGFLEELTESMGPDVKFKVHSVNEIGASKAGAFWHLEWKNMEIPLSKGCTFIDIRNE--EKTIKNVKISIEPQVKPGHLILATMKLVTTLLAKYP
        Q A+ F EEL +SMG +VKF V +V E     A   WHLEWK  +IP ++GC+F +  +E     I+N +I IE  +KPG + L+ +K +T L  ++P
Subjt:  QAALGFLEELTESMGPDVKFKVHSVNEIGASKAGAFWHLEWKNMEIPLSKGCTFIDIRNE--EKTIKNVKISIEPQVKPGHLILATMKLVTTLLAKYP

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTACAACAGAAATTTGTTTTTACAACTCTACCTGCAGGCAGCTTTGGGTTTCCTTGAAGAACTAACTGAAAGCATGGGTCCAGATGTGAAGTTCAAAGTTCATAGCGT
CAACGAAATAGGGGCTTCGAAGGCAGGAGCATTCTGGCATTTAGAGTGGAAGAACATGGAGATTCCCTTATCCAAGGGTTGCACCTTCATTGACATCAGAAATGAAGAAA
AAACTATAAAGAATGTAAAGATTTCAATTGAACCACAAGTAAAACCAGGACATCTAATCTTGGCTACAATGAAGCTTGTGACTACATTGCTTGCTAAGTATCCAGCAATT
CCAGAATGTAAGCCTATTTTAATACCTTATGCTACAGCTCTTCATGAGCAAAAGCTTCATATTCCACATTAA
mRNA sequenceShow/hide mRNA sequence
TAAAAGGCCTTCACCCATTTCTCTTTCTGAAGTGAATTAAAAACAACAATGTCTCTAACTATAAGTCCTCCTTCTCAAGCTATCAACTTGGGGGGATCCCAATCATTGAG
AAGATTTTCCTGTGCATCCTTCACTAAAAGAAACTCATATATATTACAACAAAAGAAGAACAACTATGGCAACTGCAGGAAGAGAATAACAAACAACAGATTATCCGATG
ACATTAAGCTCCATTTCGTCTCGTCCTGCTTAAAGGATGATTCCTTTTCCAGCTCAGATTCAAGTTCAAATTCTCCATCAGAAATGATCGAGAGATTCTACAAATGCATC
AATGAAAAAAACTTGAAGGAATTGAGCAATTACATCTCAGAAGACTGCAACATTGAAGACTCCTTGTTCCCTGAATCATTTACAGGCAAGAAGGTGAAATTACAAATTTA
TCCTTTCTTTTTTCCTCTTCCTTCTTCGCACGATTTTCTTCTTCTTCTCCAACGAAGTTTTGCAGCTCTGGCACGATTTCCTTCTTCTACGGCGAAGCTCTCCTTCTCCA
CAACCCTCAACTCCGACCAATGATGCGCAACCAGCTCCGACCAACGATGTGCGAGAGAACAAAAGAGAGCGAGAGCTTCTCCGCAACCCTGCAGCTTCGACCAACACTGC
GTGACAGAGCGAGAGCTTCTCCGCAACCCTACAACTTCGACTAACGCTGCGCGGCGAGATCGAGAGCGAGAGAGGAAGTGATCTGACGGAGAGAGTGAGTGATGAAAGGA
AGAGAGTGAGAGCGAGAGCGAATTCATTTTGGTAATTTCACCTGAACTTGACGTCAGCAAAGGGTAAAAAAAAACCTTGTTTTCAAAAAGCGAGGCAGTTTTCATCTTCT
CTCCCATTTTTGGGTCATCCATCCACCGGACTCAAATAAGCTACTAGATATTTCTAAACTTCTGTTCTCATTCATACTGTTATTAATGTACAACAGAAATTTGTTTTTAC
AACTCTACCTGCAGGCAGCTTTGGGTTTCCTTGAAGAACTAACTGAAAGCATGGGTCCAGATGTGAAGTTCAAAGTTCATAGCGTCAACGAAATAGGGGCTTCGAAGGCA
GGAGCATTCTGGCATTTAGAGTGGAAGAACATGGAGATTCCCTTATCCAAGGGTTGCACCTTCATTGACATCAGAAATGAAGAAAAAACTATAAAGAATGTAAAGATTTC
AATTGAACCACAAGTAAAACCAGGACATCTAATCTTGGCTACAATGAAGCTTGTGACTACATTGCTTGCTAAGTATCCAGCAATTCCAGAATGTAAGCCTATTTTAATAC
CTTATGCTACAGCTCTTCATGAGCAAAAGCTTCATATTCCACATTAA
Protein sequenceShow/hide protein sequence
MYNRNLFLQLYLQAALGFLEELTESMGPDVKFKVHSVNEIGASKAGAFWHLEWKNMEIPLSKGCTFIDIRNEEKTIKNVKISIEPQVKPGHLILATMKLVTTLLAKYPAI
PECKPILIPYATALHEQKLHIPH