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Lsi09G002810 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi09G002810
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr09:2950243..2950452
RNA-Seq ExpressionLsi09G002810
SyntenyLsi09G002810
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8647863.1 hypothetical protein Csa_000530 [Cucumis sativus]3.6e-1572.46Show/hide
Query:  MDVFIPEDYVIRRRIEKKLAATAATEKREPEAVNGRRRNSDKEKGAAGKTG-FRFAATTADNVVFNCFS
        MDVFIP+DYVIRRRIEKKLAA A  + R P   + R RNSDKEK A  KTG FRF AT ADNVVFNCFS
Subjt:  MDVFIPEDYVIRRRIEKKLAATAATEKREPEAVNGRRRNSDKEKGAAGKTG-FRFAATTADNVVFNCFS
KAG6606110.1 hypothetical protein SDJN03_03427, partial [Cucurbita argyrosperma subsp. sororia]3.7e-0462.5Show/hide
Query:  MDVFIPEDYVIRRRIEKKLAATAATEKREPEAVNGR--RRNSDKEKGA-AGKTGFR
        MDVFIPEDYV RRRIEK+    AA ++R PE + GR  R  S+KEK   AGKTGFR
Subjt:  MDVFIPEDYVIRRRIEKKLAATAATEKREPEAVNGR--RRNSDKEKGA-AGKTGFR
OMO79504.1 hypothetical protein CCACVL1_13647 [Corchorus capsularis]9.8e-0551.28Show/hide
Query:  MDVFIPEDYVIRRRIEKKLAATAA-TEKREPEAVNGRRRNSDKEKGAAGKTGFRFAATT---------ADNVVFNCFS
        MDVFIPE+YVIRRRIEKK AA    T KR PEA     +  +KEK     + FRF +T          A+NVVF+CFS
Subjt:  MDVFIPEDYVIRRRIEKKLAATAA-TEKREPEAVNGRRRNSDKEKGAAGKTGFRFAATT---------ADNVVFNCFS
TrEMBL top hitse value%identityAlignment
A0A0A0KKA7 Uncharacterized protein1.7e-1572.46Show/hide
Query:  MDVFIPEDYVIRRRIEKKLAATAATEKREPEAVNGRRRNSDKEKGAAGKTG-FRFAATTADNVVFNCFS
        MDVFIP+DYVIRRRIEKKLAA A  + R P   + R RNSDKEK A  KTG FRF AT ADNVVFNCFS
Subjt:  MDVFIPEDYVIRRRIEKKLAATAATEKREPEAVNGRRRNSDKEKGAAGKTG-FRFAATTADNVVFNCFS
A0A1R3IAB5 Uncharacterized protein4.7e-0551.28Show/hide
Query:  MDVFIPEDYVIRRRIEKKLAATAA-TEKREPEAVNGRRRNSDKEKGAAGKTGFRFAATT---------ADNVVFNCFS
        MDVFIPE+YVIRRRIEKK AA    T KR PEA     +  +KEK     + FRF +T          A+NVVF+CFS
Subjt:  MDVFIPEDYVIRRRIEKKLAATAA-TEKREPEAVNGRRRNSDKEKGAAGKTGFRFAATT---------ADNVVFNCFS
A0A7J8WVF4 Uncharacterized protein (Fragment)5.2e-0446.67Show/hide
Query:  MDVFIPEDYVIRRRIEKKLAATAATEKREPEAVNGRRRNSDKEK-------GAAGKTGFRFAATTADNVVFNCFS
        MDVFIPE+YVIRRR EKK AA A  E+R    V   +RN  + K       G AG  GF  +    +N+VF+C S
Subjt:  MDVFIPEDYVIRRRIEKKLAATAATEKREPEAVNGRRRNSDKEK-------GAAGKTGFRFAATTADNVVFNCFS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACGTCTTTATTCCCGAAGATTACGTCATTCGCCGTCGCATCGAGAAAAAACTCGCCGCCACCGCAGCCACTGAGAAGAGGGAGCCGGAGGCCGTCAACGGACGGCG
GAGGAATTCCGACAAGGAGAAGGGAGCTGCCGGAAAAACTGGATTCCGGTTCGCCGCTACAACCGCCGACAATGTGGTTTTCAATTGCTTCTCTCCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGACGTCTTTATTCCCGAAGATTACGTCATTCGCCGTCGCATCGAGAAAAAACTCGCCGCCACCGCAGCCACTGAGAAGAGGGAGCCGGAGGCCGTCAACGGACGGCG
GAGGAATTCCGACAAGGAGAAGGGAGCTGCCGGAAAAACTGGATTCCGGTTCGCCGCTACAACCGCCGACAATGTGGTTTTCAATTGCTTCTCTCCTTGA
Protein sequenceShow/hide protein sequence
MDVFIPEDYVIRRRIEKKLAATAATEKREPEAVNGRRRNSDKEKGAAGKTGFRFAATTADNVVFNCFSP