; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi09G003280 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi09G003280
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionMatK_N domain-containing protein
Genome locationchr09:3445178..3446325
RNA-Seq ExpressionLsi09G003280
SyntenyLsi09G003280
Gene Ontology termsGO:0009507 - chloroplast (cellular component)
InterPro domainsIPR022546 - Uncharacterised protein family Ycf68


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAD5336140.1 unnamed protein product [Arabidopsis thaliana]4.7e-10584.62Show/hide
Query:  IPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQGRLRPKRRAEKGGKLSVPGSPVAGFSGTTRILIPFEILRRVALWRAQYDE
        IPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQGRLR                             PFEILRRVALWRAQYDE
Subjt:  IPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQGRLRPKRRAEKGGKLSVPGSPVAGFSGTTRILIPFEILRRVALWRAQYDE

Query:  SCKLCSGGSYCLSLASMVESVGGLRGGGLPCGGCQRFESAYLQLVNLADTKLYDSTPFFRFGSSIYDLSFMDVDKILPFSSTLGWHSLKVKGEVQTKKGL
        SCKLCSGGS CLSLASMVESV GL GGGLPCGGCQRFESAYLQLVNLADTKLYDST FFRFGSSIYD SFMDVDKI PFSSTLGWHSLKVKGEVQT+KGL
Subjt:  SCKLCSGGSYCLSLASMVESVGGLRGGGLPCGGCQRFESAYLQLVNLADTKLYDSTPFFRFGSSIYDLSFMDVDKILPFSSTLGWHSLKVKGEVQTKKGL

Query:  RWIPRHPETRKGVVSDEMLRGVENKRRSGDSRIG
        RWIPRHPETRKGVVSDEMLRGVENKRRSGDSRIG
Subjt:  RWIPRHPETRKGVVSDEMLRGVENKRRSGDSRIG

CAD5336141.1 unnamed protein product [Arabidopsis thaliana]4.7e-10584.62Show/hide
Query:  IPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQGRLRPKRRAEKGGKLSVPGSPVAGFSGTTRILIPFEILRRVALWRAQYDE
        IPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQGRLR                             PFEILRRVALWRAQYDE
Subjt:  IPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQGRLRPKRRAEKGGKLSVPGSPVAGFSGTTRILIPFEILRRVALWRAQYDE

Query:  SCKLCSGGSYCLSLASMVESVGGLRGGGLPCGGCQRFESAYLQLVNLADTKLYDSTPFFRFGSSIYDLSFMDVDKILPFSSTLGWHSLKVKGEVQTKKGL
        SCKLCSGGS CLSLASMVESV GL GGGLPCGGCQRFESAYLQLVNLADTKLYDST FFRFGSSIYD SFMDVDKI PFSSTLGWHSLKVKGEVQT+KGL
Subjt:  SCKLCSGGSYCLSLASMVESVGGLRGGGLPCGGCQRFESAYLQLVNLADTKLYDSTPFFRFGSSIYDLSFMDVDKILPFSSTLGWHSLKVKGEVQTKKGL

Query:  RWIPRHPETRKGVVSDEMLRGVENKRRSGDSRIG
        RWIPRHPETRKGVVSDEMLRGVENKRRSGDSRIG
Subjt:  RWIPRHPETRKGVVSDEMLRGVENKRRSGDSRIG

CAD5336145.1 unnamed protein product [Arabidopsis thaliana]4.7e-10584.62Show/hide
Query:  IPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQGRLRPKRRAEKGGKLSVPGSPVAGFSGTTRILIPFEILRRVALWRAQYDE
        IPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQGRLR                             PFEILRRVALWRAQYDE
Subjt:  IPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQGRLRPKRRAEKGGKLSVPGSPVAGFSGTTRILIPFEILRRVALWRAQYDE

Query:  SCKLCSGGSYCLSLASMVESVGGLRGGGLPCGGCQRFESAYLQLVNLADTKLYDSTPFFRFGSSIYDLSFMDVDKILPFSSTLGWHSLKVKGEVQTKKGL
        SCKLCSGGS CLSLASMVESV GL GGGLPCGGCQRFESAYLQLVNLADTKLYDST FFRFGSSIYD SFMDVDKI PFSSTLGWHSLKVKGEVQT+KGL
Subjt:  SCKLCSGGSYCLSLASMVESVGGLRGGGLPCGGCQRFESAYLQLVNLADTKLYDSTPFFRFGSSIYDLSFMDVDKILPFSSTLGWHSLKVKGEVQTKKGL

Query:  RWIPRHPETRKGVVSDEMLRGVENKRRSGDSRIG
        RWIPRHPETRKGVVSDEMLRGVENKRRSGDSRIG
Subjt:  RWIPRHPETRKGVVSDEMLRGVENKRRSGDSRIG

KAG7528872.1 hypothetical protein ISN44_Un153g000040 [Arabidopsis suecica]3.5e-10081.28Show/hide
Query:  IPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQGRLRPKRRAEKGGKLSVPGSPVAGFSGTTRILIPFEILRRVALWRAQYDE
        IPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQGRL                                    RVALWRAQYDE
Subjt:  IPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQGRLRPKRRAEKGGKLSVPGSPVAGFSGTTRILIPFEILRRVALWRAQYDE

Query:  SCKLCSGGSYCLSLASMVESVGGLRGGGLPCGGCQRFESAYLQLVNLADTKLYDSTPFFRFGSSIYDLSFMDVDKILPFSSTLGWHSLKVKGEVQTKKGL
        SCKLCSGGS CLSLASMVESV GL GGGLPCGGCQRFESAYLQLVNLADTKLYDST FFRFGSSIYD SFMDVDKI PFSSTLGWHSLKVKGEVQT+KGL
Subjt:  SCKLCSGGSYCLSLASMVESVGGLRGGGLPCGGCQRFESAYLQLVNLADTKLYDSTPFFRFGSSIYDLSFMDVDKILPFSSTLGWHSLKVKGEVQTKKGL

Query:  RWIPRHPETRKGVVSDEMLRGVENKRRSGDSRIGQ
        RWIPRHPETRKGVVSDEMLRGVENKRRSGDSRIG+
Subjt:  RWIPRHPETRKGVVSDEMLRGVENKRRSGDSRIGQ

OVA05688.1 hypothetical protein BVC80_4285g1 [Macleaya cordata]9.1e-10978.52Show/hide
Query:  VGVGGSLRVPSSGIPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQGRLRPKRRAEKGGKLSVPGSPVAGFSGTTRILIPFEI
        VGVGGS RVPSSGIPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQGRLR       G     P   +   S +     PFEI
Subjt:  VGVGGSLRVPSSGIPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQGRLRPKRRAEKGGKLSVPGSPVAGFSGTTRILIPFEI

Query:  LRRVALWRAQYDESCKLCSGGSYCLSLASMVESVGGLRGGGLPCGGCQRFESAYLQLVNLADTKLYDSTPFFRFGSSIYDLSFMDVDKILPFSSTLGWHS
        LRRVALWRAQ                      S GGLRGGGLPCGGCQRFESAYLQLVNLADTK+YDST FFRFGSSIYDLSFMDVDKIL FSSTLGWHS
Subjt:  LRRVALWRAQYDESCKLCSGGSYCLSLASMVESVGGLRGGGLPCGGCQRFESAYLQLVNLADTKLYDSTPFFRFGSSIYDLSFMDVDKILPFSSTLGWHS

Query:  LKVKGEVQTKKGLRWIPRHPETRKGVVSDEMLRGVENKRRSGDSRIGQPFKLLLNPWAGKRQPGELKHLS
        LKV GEVQT+KGLRWIPRHPETRKGV SDEMLRGVENK RSGDSRIGQPF+LLLNPWAGKRQPGELKHLS
Subjt:  LKVKGEVQTKKGLRWIPRHPETRKGVVSDEMLRGVENKRRSGDSRIGQPFKLLLNPWAGKRQPGELKHLS

TrEMBL top hitse value%identityAlignment
A0A200Q5G5 Uncharacterized protein ycf684.4e-10978.52Show/hide
Query:  VGVGGSLRVPSSGIPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQGRLRPKRRAEKGGKLSVPGSPVAGFSGTTRILIPFEI
        VGVGGS RVPSSGIPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQGRLR       G     P   +   S +     PFEI
Subjt:  VGVGGSLRVPSSGIPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQGRLRPKRRAEKGGKLSVPGSPVAGFSGTTRILIPFEI

Query:  LRRVALWRAQYDESCKLCSGGSYCLSLASMVESVGGLRGGGLPCGGCQRFESAYLQLVNLADTKLYDSTPFFRFGSSIYDLSFMDVDKILPFSSTLGWHS
        LRRVALWRAQ                      S GGLRGGGLPCGGCQRFESAYLQLVNLADTK+YDST FFRFGSSIYDLSFMDVDKIL FSSTLGWHS
Subjt:  LRRVALWRAQYDESCKLCSGGSYCLSLASMVESVGGLRGGGLPCGGCQRFESAYLQLVNLADTKLYDSTPFFRFGSSIYDLSFMDVDKILPFSSTLGWHS

Query:  LKVKGEVQTKKGLRWIPRHPETRKGVVSDEMLRGVENKRRSGDSRIGQPFKLLLNPWAGKRQPGELKHLS
        LKV GEVQT+KGLRWIPRHPETRKGV SDEMLRGVENK RSGDSRIGQPF+LLLNPWAGKRQPGELKHLS
Subjt:  LKVKGEVQTKKGLRWIPRHPETRKGVVSDEMLRGVENKRRSGDSRIGQPFKLLLNPWAGKRQPGELKHLS

A0A5N6MLP8 Uncharacterized protein ycf687.1e-8368.55Show/hide
Query:  VGVGGSLRVPSSGIPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQGRLRPKRRAEKGGKLSVPGSPVAGFSGTTRILIPFEI
        VGVGGS RVP SGIPGEEDQVGPCEQLDALSPFNPLSE+RQKEGKSMDRPH LHPVGTTR PQGRLR             PG+                 
Subjt:  VGVGGSLRVPSSGIPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQGRLRPKRRAEKGGKLSVPGSPVAGFSGTTRILIPFEI

Query:  LRRVALWRAQYDESCKLCSGGSYCLSLASMVESVGGLRGGGLPCGGCQRFESAYLQLVNLADTKLYDSTPFFRFGSSIYDLSFMDVDKILPFSSTLGWHS
                                          G LRGGGLPCGGCQRFESAYLQLVNLADTKLYDST FFRFG SIYDLSFMDVDKI PFSSTLGWHS
Subjt:  LRRVALWRAQYDESCKLCSGGSYCLSLASMVESVGGLRGGGLPCGGCQRFESAYLQLVNLADTKLYDSTPFFRFGSSIYDLSFMDVDKILPFSSTLGWHS

Query:  LKVKGEVQTKKGLRWIPRHPETRKGVVSDEMLRGVENKRRSGDSRIGQ
        LK+KGEVQT+KGLRWIPRHPETRKGVVSDEMLRGVENK RSGDSRIG+
Subjt:  LKVKGEVQTKKGLRWIPRHPETRKGVVSDEMLRGVENKRRSGDSRIGQ

A0A7G2FJL3 Uncharacterized protein ycf682.3e-10584.62Show/hide
Query:  IPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQGRLRPKRRAEKGGKLSVPGSPVAGFSGTTRILIPFEILRRVALWRAQYDE
        IPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQGRLR                             PFEILRRVALWRAQYDE
Subjt:  IPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQGRLRPKRRAEKGGKLSVPGSPVAGFSGTTRILIPFEILRRVALWRAQYDE

Query:  SCKLCSGGSYCLSLASMVESVGGLRGGGLPCGGCQRFESAYLQLVNLADTKLYDSTPFFRFGSSIYDLSFMDVDKILPFSSTLGWHSLKVKGEVQTKKGL
        SCKLCSGGS CLSLASMVESV GL GGGLPCGGCQRFESAYLQLVNLADTKLYDST FFRFGSSIYD SFMDVDKI PFSSTLGWHSLKVKGEVQT+KGL
Subjt:  SCKLCSGGSYCLSLASMVESVGGLRGGGLPCGGCQRFESAYLQLVNLADTKLYDSTPFFRFGSSIYDLSFMDVDKILPFSSTLGWHSLKVKGEVQTKKGL

Query:  RWIPRHPETRKGVVSDEMLRGVENKRRSGDSRIG
        RWIPRHPETRKGVVSDEMLRGVENKRRSGDSRIG
Subjt:  RWIPRHPETRKGVVSDEMLRGVENKRRSGDSRIG

A0A7G2FKR6 Uncharacterized protein ycf682.3e-10584.62Show/hide
Query:  IPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQGRLRPKRRAEKGGKLSVPGSPVAGFSGTTRILIPFEILRRVALWRAQYDE
        IPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQGRLR                             PFEILRRVALWRAQYDE
Subjt:  IPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQGRLRPKRRAEKGGKLSVPGSPVAGFSGTTRILIPFEILRRVALWRAQYDE

Query:  SCKLCSGGSYCLSLASMVESVGGLRGGGLPCGGCQRFESAYLQLVNLADTKLYDSTPFFRFGSSIYDLSFMDVDKILPFSSTLGWHSLKVKGEVQTKKGL
        SCKLCSGGS CLSLASMVESV GL GGGLPCGGCQRFESAYLQLVNLADTKLYDST FFRFGSSIYD SFMDVDKI PFSSTLGWHSLKVKGEVQT+KGL
Subjt:  SCKLCSGGSYCLSLASMVESVGGLRGGGLPCGGCQRFESAYLQLVNLADTKLYDSTPFFRFGSSIYDLSFMDVDKILPFSSTLGWHSLKVKGEVQTKKGL

Query:  RWIPRHPETRKGVVSDEMLRGVENKRRSGDSRIG
        RWIPRHPETRKGVVSDEMLRGVENKRRSGDSRIG
Subjt:  RWIPRHPETRKGVVSDEMLRGVENKRRSGDSRIG

A0A7G2FMH4 Uncharacterized protein ycf682.3e-10584.62Show/hide
Query:  IPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQGRLRPKRRAEKGGKLSVPGSPVAGFSGTTRILIPFEILRRVALWRAQYDE
        IPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQGRLR                             PFEILRRVALWRAQYDE
Subjt:  IPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQGRLRPKRRAEKGGKLSVPGSPVAGFSGTTRILIPFEILRRVALWRAQYDE

Query:  SCKLCSGGSYCLSLASMVESVGGLRGGGLPCGGCQRFESAYLQLVNLADTKLYDSTPFFRFGSSIYDLSFMDVDKILPFSSTLGWHSLKVKGEVQTKKGL
        SCKLCSGGS CLSLASMVESV GL GGGLPCGGCQRFESAYLQLVNLADTKLYDST FFRFGSSIYD SFMDVDKI PFSSTLGWHSLKVKGEVQT+KGL
Subjt:  SCKLCSGGSYCLSLASMVESVGGLRGGGLPCGGCQRFESAYLQLVNLADTKLYDSTPFFRFGSSIYDLSFMDVDKILPFSSTLGWHSLKVKGEVQTKKGL

Query:  RWIPRHPETRKGVVSDEMLRGVENKRRSGDSRIG
        RWIPRHPETRKGVVSDEMLRGVENKRRSGDSRIG
Subjt:  RWIPRHPETRKGVVSDEMLRGVENKRRSGDSRIG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACGTTGGAGTCGGCGGCTCTCTTAGGGTTCCCTCATCTGGGATCCCTGGGGAAGAGGATCAAGTTGGCCCTTGCGAACAGCTTGATGCACTATCTCCCTTCAACCC
TTTGAGCGAAATGCGGCAAAAGGAAGGAAAATCCATGGACCGACCCCATCGTCTCCACCCCGTAGGAACTACGAGATCACCCCAAGGACGCCTTCGACCAAAGAGGCGGG
CGGAAAAGGGGGGAAAGCTCTCCGTTCCTGGTTCTCCTGTAGCTGGATTCTCCGGAACCACAAGAATCCTTATACCTTTTGAGATTTTGAGAAGAGTTGCTCTTTGGAGA
GCACAGTACGATGAAAGTTGTAAGCTGTGTTCGGGGGGGAGTTATTGTCTATCGTTGGCCTCTATGGTAGAATCAGTCGGGGGCCTGAGAGGCGGTGGTTTACCCTGTGG
CGGATGTCAGCGGTTCGAGTCCGCTTATCTCCAACTCGTGAACTTAGCCGATACAAAGCTATATGATAGCACTCCATTTTTCCGATTCGGCAGTTCGATCTATGATTTAT
CATTCATGGACGTTGATAAGATCCTTCCATTTAGCAGCACCTTAGGATGGCATAGCCTTAAAGTTAAGGGCGAGGTTCAAACGAAGAAAGGCTTACGGTGGATACCTAGG
CACCCAGAGACGAGGAAGGGCGTAGTAAGCGACGAAATGCTTCGGGGAGTTGAAAATAAGCGTAGATCCGGAGATTCCCGAATAGGTCAACCTTTCAAACTGCTGCTGAA
TCCATGGGCAGGCAAGAGACAACCTGGCGAACTGAAACATCTTAGTAGCCAGAGGAAAAGAAAGCAAAAGCGATTCCCTAGCGGCGAGCGAAATGGGAGCAGCCTAAACC
GTGAAAACGGGGTTGTGGGAGAGCAATACAAGCGTCGTGCTGCTAGGCGAAGCGGTGGAGTGCTGCACCCTAGATGGCGAGAGTCCAGTAGCCGAAAGCATCACTAG
mRNA sequenceShow/hide mRNA sequence
ATGGACGTTGGAGTCGGCGGCTCTCTTAGGGTTCCCTCATCTGGGATCCCTGGGGAAGAGGATCAAGTTGGCCCTTGCGAACAGCTTGATGCACTATCTCCCTTCAACCC
TTTGAGCGAAATGCGGCAAAAGGAAGGAAAATCCATGGACCGACCCCATCGTCTCCACCCCGTAGGAACTACGAGATCACCCCAAGGACGCCTTCGACCAAAGAGGCGGG
CGGAAAAGGGGGGAAAGCTCTCCGTTCCTGGTTCTCCTGTAGCTGGATTCTCCGGAACCACAAGAATCCTTATACCTTTTGAGATTTTGAGAAGAGTTGCTCTTTGGAGA
GCACAGTACGATGAAAGTTGTAAGCTGTGTTCGGGGGGGAGTTATTGTCTATCGTTGGCCTCTATGGTAGAATCAGTCGGGGGCCTGAGAGGCGGTGGTTTACCCTGTGG
CGGATGTCAGCGGTTCGAGTCCGCTTATCTCCAACTCGTGAACTTAGCCGATACAAAGCTATATGATAGCACTCCATTTTTCCGATTCGGCAGTTCGATCTATGATTTAT
CATTCATGGACGTTGATAAGATCCTTCCATTTAGCAGCACCTTAGGATGGCATAGCCTTAAAGTTAAGGGCGAGGTTCAAACGAAGAAAGGCTTACGGTGGATACCTAGG
CACCCAGAGACGAGGAAGGGCGTAGTAAGCGACGAAATGCTTCGGGGAGTTGAAAATAAGCGTAGATCCGGAGATTCCCGAATAGGTCAACCTTTCAAACTGCTGCTGAA
TCCATGGGCAGGCAAGAGACAACCTGGCGAACTGAAACATCTTAGTAGCCAGAGGAAAAGAAAGCAAAAGCGATTCCCTAGCGGCGAGCGAAATGGGAGCAGCCTAAACC
GTGAAAACGGGGTTGTGGGAGAGCAATACAAGCGTCGTGCTGCTAGGCGAAGCGGTGGAGTGCTGCACCCTAGATGGCGAGAGTCCAGTAGCCGAAAGCATCACTAG
Protein sequenceShow/hide protein sequence
MDVGVGGSLRVPSSGIPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRLHPVGTTRSPQGRLRPKRRAEKGGKLSVPGSPVAGFSGTTRILIPFEILRRVALWR
AQYDESCKLCSGGSYCLSLASMVESVGGLRGGGLPCGGCQRFESAYLQLVNLADTKLYDSTPFFRFGSSIYDLSFMDVDKILPFSSTLGWHSLKVKGEVQTKKGLRWIPR
HPETRKGVVSDEMLRGVENKRRSGDSRIGQPFKLLLNPWAGKRQPGELKHLSSQRKRKQKRFPSGERNGSSLNRENGVVGEQYKRRAARRSGGVLHPRWRESSSRKHH