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Lsi09G003300 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi09G003300
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionMyb-like domain-containing protein
Genome locationchr09:3447338..3447888
RNA-Seq ExpressionLsi09G003300
SyntenyLsi09G003300
Gene Ontology termsGO:0009507 - chloroplast (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6483622.1 hypothetical protein ZIOFF_060273 [Zingiber officinale]5.1e-7095.56Show/hide
Query:  LRPPFTGASVAGSPVIRSPTSLTFRHWAGVSPHTWSYDFAETCVFGKQSPGPGHCDPLCEEAPLLPKLRGYFAEFLRESCLAPLGILYLPTCVGFGYRYP
        LRPPFTGASVAGSPVIRSPTSLTFRHWAGVSPHTWSYDFAETCVFGKQSPGPGHCDPLCEEAPLLPKLRGYFAEFLRESCLAPLGILYLPT VGFGYRYP
Subjt:  LRPPFTGASVAGSPVIRSPTSLTFRHWAGVSPHTWSYDFAETCVFGKQSPGPGHCDPLCEEAPLLPKLRGYFAEFLRESCLAPLGILYLPTCVGFGYRYP

Query:  FVEGRSSFSWEYGMGYFSAVAPGTRTLARA-SSVP
        FVEGRSSFSWEYGMGYF AVAP TRTLAR  SS P
Subjt:  FVEGRSSFSWEYGMGYFSAVAPGTRTLARA-SSVP

KZN08865.1 hypothetical protein DCAR_001521 [Daucus carota subsp. sativus]4.6e-63100Show/hide
Query:  RSPTSLTFRHWAGVSPHTWSYDFAETCVFGKQSPGPGHCDPLCEEAPLLPKLRGYFAEFLRESCLAPLGILYLPTCVGFGYRYPFVEGRSSFSWEYGMGY
        RSPTSLTFRHWAGVSPHTWSYDFAETCVFGKQSPGPGHCDPLCEEAPLLPKLRGYFAEFLRESCLAPLGILYLPTCVGFGYRYPFVEGRSSFSWEYGMGY
Subjt:  RSPTSLTFRHWAGVSPHTWSYDFAETCVFGKQSPGPGHCDPLCEEAPLLPKLRGYFAEFLRESCLAPLGILYLPTCVGFGYRYPFVEGRSSFSWEYGMGY

Query:  FSAVAPGTRTLAR
        FSAVAPGTRTLAR
Subjt:  FSAVAPGTRTLAR

PWA74212.1 hypothetical protein CTI12_AA254690 [Artemisia annua]5.0e-5792.04Show/hide
Query:  RSPTSLTFRHWAGVSPHTWSYDFAETCVFGKQSPGPGHCDPLCEEAPLLPKLRGYFAEFLRESCLAPLGILYLPTCVGFGYRYPFVEGRSSFSWEYGMGY
        R   SLTFRHWAGVSP+TWSYDFAETCVFGKQSPGPGH DPLCEEAPLLPKLRGYFAEFL ESCLAPLGILYLPTCVGFGY YPFVEGRSSFSWEYG+GY
Subjt:  RSPTSLTFRHWAGVSPHTWSYDFAETCVFGKQSPGPGHCDPLCEEAPLLPKLRGYFAEFLRESCLAPLGILYLPTCVGFGYRYPFVEGRSSFSWEYGMGY

Query:  FSAVAPGTRTLAR
        FSA+APGTRTLAR
Subjt:  FSAVAPGTRTLAR

TQD86667.1 hypothetical protein C1H46_027793 [Malus baccata]6.7e-6297.37Show/hide
Query:  IRSPTSLTFRHWAGVSPHTWSYDFAETCVFGKQSPGPGHCDPLCEEAPLLPKLRGYFAEFLRESCLAPLGILYLPTCVGFGYRYPFVEGRSSFSWEYGMG
        + SPTSLTFRHWAGVSPHTWSYDFAETCVFGKQSPGPGHCDPLCE APLLPKLRGYFAEFLRESCLAPLGILYLPTCVGFGYRYPFVEGRSSFSWEYGMG
Subjt:  IRSPTSLTFRHWAGVSPHTWSYDFAETCVFGKQSPGPGHCDPLCEEAPLLPKLRGYFAEFLRESCLAPLGILYLPTCVGFGYRYPFVEGRSSFSWEYGMG

Query:  YFSAVAPGTRTLAR
        YFSAVAPGTRTLAR
Subjt:  YFSAVAPGTRTLAR

XP_020999426.1 uncharacterized protein LOC110281477 [Arachis duranensis]2.8e-6896.12Show/hide
Query:  LRPPFTGASVAGSPVIRSPTSLTFRHWAGVSPHTWSYDFAETCVFGKQSPGPGHCDPLCEEAPLLPKLRGYFAEFLRESCLAPLGILYLPTCVGFGYRYP
        L PPFTGASVAGSPV+RSPTSLTFRHWAGVSPHTWSYDFAETCVFGKQSPGPGHCDPLC  APLLPKLRGYFAEFLRESCLAPLGILYLPT VGFGYRYP
Subjt:  LRPPFTGASVAGSPVIRSPTSLTFRHWAGVSPHTWSYDFAETCVFGKQSPGPGHCDPLCEEAPLLPKLRGYFAEFLRESCLAPLGILYLPTCVGFGYRYP

Query:  FVEGRSSFSWEYGMGYFSAVAPGTRTLAR
        FVEGRSSFSWEYGMGYFSAVAPGTRTLAR
Subjt:  FVEGRSSFSWEYGMGYFSAVAPGTRTLAR

TrEMBL top hitse value%identityAlignment
A0A166GEI3 Uncharacterized protein2.2e-63100Show/hide
Query:  RSPTSLTFRHWAGVSPHTWSYDFAETCVFGKQSPGPGHCDPLCEEAPLLPKLRGYFAEFLRESCLAPLGILYLPTCVGFGYRYPFVEGRSSFSWEYGMGY
        RSPTSLTFRHWAGVSPHTWSYDFAETCVFGKQSPGPGHCDPLCEEAPLLPKLRGYFAEFLRESCLAPLGILYLPTCVGFGYRYPFVEGRSSFSWEYGMGY
Subjt:  RSPTSLTFRHWAGVSPHTWSYDFAETCVFGKQSPGPGHCDPLCEEAPLLPKLRGYFAEFLRESCLAPLGILYLPTCVGFGYRYPFVEGRSSFSWEYGMGY

Query:  FSAVAPGTRTLAR
        FSAVAPGTRTLAR
Subjt:  FSAVAPGTRTLAR

A0A2U1NL20 Uncharacterized protein2.4e-5792.04Show/hide
Query:  RSPTSLTFRHWAGVSPHTWSYDFAETCVFGKQSPGPGHCDPLCEEAPLLPKLRGYFAEFLRESCLAPLGILYLPTCVGFGYRYPFVEGRSSFSWEYGMGY
        R   SLTFRHWAGVSP+TWSYDFAETCVFGKQSPGPGH DPLCEEAPLLPKLRGYFAEFL ESCLAPLGILYLPTCVGFGY YPFVEGRSSFSWEYG+GY
Subjt:  RSPTSLTFRHWAGVSPHTWSYDFAETCVFGKQSPGPGHCDPLCEEAPLLPKLRGYFAEFLRESCLAPLGILYLPTCVGFGYRYPFVEGRSSFSWEYGMGY

Query:  FSAVAPGTRTLAR
        FSA+APGTRTLAR
Subjt:  FSAVAPGTRTLAR

A0A540LJL7 Uncharacterized protein3.2e-6297.37Show/hide
Query:  IRSPTSLTFRHWAGVSPHTWSYDFAETCVFGKQSPGPGHCDPLCEEAPLLPKLRGYFAEFLRESCLAPLGILYLPTCVGFGYRYPFVEGRSSFSWEYGMG
        + SPTSLTFRHWAGVSPHTWSYDFAETCVFGKQSPGPGHCDPLCE APLLPKLRGYFAEFLRESCLAPLGILYLPTCVGFGYRYPFVEGRSSFSWEYGMG
Subjt:  IRSPTSLTFRHWAGVSPHTWSYDFAETCVFGKQSPGPGHCDPLCEEAPLLPKLRGYFAEFLRESCLAPLGILYLPTCVGFGYRYPFVEGRSSFSWEYGMG

Query:  YFSAVAPGTRTLAR
        YFSAVAPGTRTLAR
Subjt:  YFSAVAPGTRTLAR

A0A6P5NU31 uncharacterized protein LOC1102814771.4e-6896.12Show/hide
Query:  LRPPFTGASVAGSPVIRSPTSLTFRHWAGVSPHTWSYDFAETCVFGKQSPGPGHCDPLCEEAPLLPKLRGYFAEFLRESCLAPLGILYLPTCVGFGYRYP
        L PPFTGASVAGSPV+RSPTSLTFRHWAGVSPHTWSYDFAETCVFGKQSPGPGHCDPLC  APLLPKLRGYFAEFLRESCLAPLGILYLPT VGFGYRYP
Subjt:  LRPPFTGASVAGSPVIRSPTSLTFRHWAGVSPHTWSYDFAETCVFGKQSPGPGHCDPLCEEAPLLPKLRGYFAEFLRESCLAPLGILYLPTCVGFGYRYP

Query:  FVEGRSSFSWEYGMGYFSAVAPGTRTLAR
        FVEGRSSFSWEYGMGYFSAVAPGTRTLAR
Subjt:  FVEGRSSFSWEYGMGYFSAVAPGTRTLAR

S8DAJ4 Uncharacterized protein (Fragment)5.9e-56100Show/hide
Query:  LRPPFTGASVAGSPVIRSPTSLTFRHWAGVSPHTWSYDFAETCVFGKQSPGPGHCDPLCEEAPLLPKLRGYFAEFLRESCLAPLGILYLPTCVGFGYRYP
        LRPPFTGASVAGSPVIRSPTSLTFRHWAGVSPHTWSYDFAETCVFGKQSPGPGHCDPLCEEAPLLPKLRGYFAEFLRESCLAPLGILYLPTCVGFGYRYP
Subjt:  LRPPFTGASVAGSPVIRSPTSLTFRHWAGVSPHTWSYDFAETCVFGKQSPGPGHCDPLCEEAPLLPKLRGYFAEFLRESCLAPLGILYLPTCVGFGYRYP

Query:  FV
        FV
Subjt:  FV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TTACGGCCGCCGTTCACCGGGGCTTCGGTCGCCGGCTCCCCTGTCATCAGGTCACCAACTTCCTTGACCTTCCGGCACTGGGCAGGCGTCAGCCCCCATACATGGTCTTA
CGACTTTGCGGAGACCTGTGTTTTTGGTAAACAGTCGCCCGGGCCTGGTCACTGCGACCCCCTTTGTGAGGAGGCACCCCTTCTCCCGAAGTTACGGGGCTATTTTGCCG
AGTTCCTTAGAGAGAGTTGTCTCGCGCCCCTAGGTATTCTCTACCTACCCACCTGTGTCGGTTTCGGGTACAGGTACCCTTTTGTTGAAGGTCGTTCGAGCTTTTCCTGG
GAGTATGGCATGGGTTACTTCAGCGCCGTAGCGCCTGGTACTCGAACATTGGCTCGAGCCTCCTCCGTCCCTCGGGACCAACAAGGGGTAGTACAGGAATATTCACCTGT
TGTCCATCGACTACGCCTTTCGGCCTGA
mRNA sequenceShow/hide mRNA sequence
TTACGGCCGCCGTTCACCGGGGCTTCGGTCGCCGGCTCCCCTGTCATCAGGTCACCAACTTCCTTGACCTTCCGGCACTGGGCAGGCGTCAGCCCCCATACATGGTCTTA
CGACTTTGCGGAGACCTGTGTTTTTGGTAAACAGTCGCCCGGGCCTGGTCACTGCGACCCCCTTTGTGAGGAGGCACCCCTTCTCCCGAAGTTACGGGGCTATTTTGCCG
AGTTCCTTAGAGAGAGTTGTCTCGCGCCCCTAGGTATTCTCTACCTACCCACCTGTGTCGGTTTCGGGTACAGGTACCCTTTTGTTGAAGGTCGTTCGAGCTTTTCCTGG
GAGTATGGCATGGGTTACTTCAGCGCCGTAGCGCCTGGTACTCGAACATTGGCTCGAGCCTCCTCCGTCCCTCGGGACCAACAAGGGGTAGTACAGGAATATTCACCTGT
TGTCCATCGACTACGCCTTTCGGCCTGA
Protein sequenceShow/hide protein sequence
LRPPFTGASVAGSPVIRSPTSLTFRHWAGVSPHTWSYDFAETCVFGKQSPGPGHCDPLCEEAPLLPKLRGYFAEFLRESCLAPLGILYLPTCVGFGYRYPFVEGRSSFSW
EYGMGYFSAVAPGTRTLARASSVPRDQQGVVQEYSPVVHRLRLSA