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Lsi09G003330 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi09G003330
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr09:3452832..3453149
RNA-Seq ExpressionLsi09G003330
SyntenyLsi09G003330
Gene Ontology termsGO:0009507 - chloroplast (cellular component)
InterPro domainsIPR022546 - Uncharacterised protein family Ycf68


Homology Show/hide homology
GenBank top hitse value%identityAlignment
RWR86369.1 hypothetical protein CKAN_01526400 [Cinnamomum micranthum f. kanehirae]3.2e-3788.64Show/hide
Query:  PDPEMWIIQGTLAWRTSP----EDRWGDSGEIQCRSNFLFTRGIRAVRGGPPRLLSSRESIHPLSVYGQLSLEHRFRFGLNGKIKRST
        PDPEMWIIQGTLAWRT P    EDRWGDSGEIQCRSNFLFTRGIRAVRGGPP LLSSRESIHPLSVYGQLSLEHRFRFGLNGK++  T
Subjt:  PDPEMWIIQGTLAWRTSP----EDRWGDSGEIQCRSNFLFTRGIRAVRGGPPRLLSSRESIHPLSVYGQLSLEHRFRFGLNGKIKRST

RWR98273.1 hypothetical protein CKAN_02780200 [Cinnamomum micranthum f. kanehirae]2.1e-3687.5Show/hide
Query:  PDPEMWIIQGTLAWRTSP----EDRWGDSGEIQCRSNFLFTRGIRAVRGGPPRLLSSRESIHPLSVYGQLSLEHRFRFGLNGKIKRST
        PDP MWIIQGTLAWRT P    EDRWGDSGEIQCRSNFLFTRGIRAVRGGPP LLSSRESIHPLSVYGQLSLEHRFRFGLNGK++  T
Subjt:  PDPEMWIIQGTLAWRTSP----EDRWGDSGEIQCRSNFLFTRGIRAVRGGPPRLLSSRESIHPLSVYGQLSLEHRFRFGLNGKIKRST

RYR42392.1 hypothetical protein Ahy_A08g038864 [Arachis hypogaea]9.3e-3791.76Show/hide
Query:  PDPEMWIIQGTLAWRTSP----EDRWGDSGEIQCRSNFLFTRGIRAVRGGPPRLLSSRESIHPLSVYGQLSLEHRFRFGLNGKIK
        PDPEMWIIQGTLAWRTSP    EDRWGDSGEIQCRSNFLFTRGI AVRGGPPRLLSSRE IHPLSVYGQLSLEHRFRFGLNGK K
Subjt:  PDPEMWIIQGTLAWRTSP----EDRWGDSGEIQCRSNFLFTRGIRAVRGGPPRLLSSRESIHPLSVYGQLSLEHRFRFGLNGKIK

THU42410.1 hypothetical protein C4D60_Mb00t17760 [Musa balbisiana]3.8e-3889.77Show/hide
Query:  PDPEMWIIQGTLAWRTSP----EDRWGDSGEIQCRSNFLFTRGIRAVRGGPPRLLSSRESIHPLSVYGQLSLEHRFRFGLNGKIKRST
        PDPEMWIIQGTLAWRT P    EDRWGDSGEIQCRSNFLFTRGIRAVRGGPPRLLSSRESIHPLSVYGQLSLEHRFRFGLNGK++  T
Subjt:  PDPEMWIIQGTLAWRTSP----EDRWGDSGEIQCRSNFLFTRGIRAVRGGPPRLLSSRESIHPLSVYGQLSLEHRFRFGLNGKIKRST

THU42596.1 hypothetical protein C4D60_Mb00t15430 [Musa balbisiana]3.8e-3889.77Show/hide
Query:  PDPEMWIIQGTLAWRTSP----EDRWGDSGEIQCRSNFLFTRGIRAVRGGPPRLLSSRESIHPLSVYGQLSLEHRFRFGLNGKIKRST
        PDPEMWIIQGTLAWRT P    EDRWGDSGEIQCRSNFLFTRGIRAVRGGPPRLLSSRESIHPLSVYGQLSLEHRFRFGLNGK++  T
Subjt:  PDPEMWIIQGTLAWRTSP----EDRWGDSGEIQCRSNFLFTRGIRAVRGGPPRLLSSRESIHPLSVYGQLSLEHRFRFGLNGKIKRST

TrEMBL top hitse value%identityAlignment
A0A3S3RAS8 Uncharacterized protein ycf681.0e-3687.5Show/hide
Query:  PDPEMWIIQGTLAWRTSP----EDRWGDSGEIQCRSNFLFTRGIRAVRGGPPRLLSSRESIHPLSVYGQLSLEHRFRFGLNGKIKRST
        PDP MWIIQGTLAWRT P    EDRWGDSGEIQCRSNFLFTRGIRAVRGGPP LLSSRESIHPLSVYGQLSLEHRFRFGLNGK++  T
Subjt:  PDPEMWIIQGTLAWRTSP----EDRWGDSGEIQCRSNFLFTRGIRAVRGGPPRLLSSRESIHPLSVYGQLSLEHRFRFGLNGKIKRST

A0A443P6I3 Uncharacterized protein ycf681.6e-3788.64Show/hide
Query:  PDPEMWIIQGTLAWRTSP----EDRWGDSGEIQCRSNFLFTRGIRAVRGGPPRLLSSRESIHPLSVYGQLSLEHRFRFGLNGKIKRST
        PDPEMWIIQGTLAWRT P    EDRWGDSGEIQCRSNFLFTRGIRAVRGGPP LLSSRESIHPLSVYGQLSLEHRFRFGLNGK++  T
Subjt:  PDPEMWIIQGTLAWRTSP----EDRWGDSGEIQCRSNFLFTRGIRAVRGGPPRLLSSRESIHPLSVYGQLSLEHRFRFGLNGKIKRST

A0A445BUR7 Uncharacterized protein ycf684.5e-3791.76Show/hide
Query:  PDPEMWIIQGTLAWRTSP----EDRWGDSGEIQCRSNFLFTRGIRAVRGGPPRLLSSRESIHPLSVYGQLSLEHRFRFGLNGKIK
        PDPEMWIIQGTLAWRTSP    EDRWGDSGEIQCRSNFLFTRGI AVRGGPPRLLSSRE IHPLSVYGQLSLEHRFRFGLNGK K
Subjt:  PDPEMWIIQGTLAWRTSP----EDRWGDSGEIQCRSNFLFTRGIRAVRGGPPRLLSSRESIHPLSVYGQLSLEHRFRFGLNGKIK

A0A4S8I423 Uncharacterized protein ycf681.8e-3889.77Show/hide
Query:  PDPEMWIIQGTLAWRTSP----EDRWGDSGEIQCRSNFLFTRGIRAVRGGPPRLLSSRESIHPLSVYGQLSLEHRFRFGLNGKIKRST
        PDPEMWIIQGTLAWRT P    EDRWGDSGEIQCRSNFLFTRGIRAVRGGPPRLLSSRESIHPLSVYGQLSLEHRFRFGLNGK++  T
Subjt:  PDPEMWIIQGTLAWRTSP----EDRWGDSGEIQCRSNFLFTRGIRAVRGGPPRLLSSRESIHPLSVYGQLSLEHRFRFGLNGKIKRST

A0A4V6T3W7 Uncharacterized protein ycf681.8e-3889.77Show/hide
Query:  PDPEMWIIQGTLAWRTSP----EDRWGDSGEIQCRSNFLFTRGIRAVRGGPPRLLSSRESIHPLSVYGQLSLEHRFRFGLNGKIKRST
        PDPEMWIIQGTLAWRT P    EDRWGDSGEIQCRSNFLFTRGIRAVRGGPPRLLSSRESIHPLSVYGQLSLEHRFRFGLNGK++  T
Subjt:  PDPEMWIIQGTLAWRTSP----EDRWGDSGEIQCRSNFLFTRGIRAVRGGPPRLLSSRESIHPLSVYGQLSLEHRFRFGLNGKIKRST

SwissProt top hitse value%identityAlignment
P03938 Uncharacterized protein ycf684.8e-1261.9Show/hide
Query:  GEIQCRSN----FLFTRGIRAVRGGPPRLLSSRESIHPLSVYGQLSLEHRFRFGLNGKIKRST
        G IQ RS+    F    G     GGPP LLSSRESIHPLSVYG+LSLEHR RF LNGK++  T
Subjt:  GEIQCRSN----FLFTRGIRAVRGGPPRLLSSRESIHPLSVYGQLSLEHRFRFGLNGKIKRST

Q49KT9 Uncharacterized protein ycf689.8e-0558.54Show/hide
Query:  PDPEMWIIQGTLAWRTSPEDRWGDS--------GEIQCRSN
        PDPEMWIIQGTLAWRTSP     ++        G IQ RSN
Subjt:  PDPEMWIIQGTLAWRTSPEDRWGDS--------GEIQCRSN

Q6ENQ5 Uncharacterized protein ycf687.5e-1363.49Show/hide
Query:  GEIQCRSN----FLFTRGIRAVRGGPPRLLSSRESIHPLSVYGQLSLEHRFRFGLNGKIKRST
        G IQ RS+    F    G     GGPPRLLSSRESIHPLSVYG+LSLEHR RF LNGK++  T
Subjt:  GEIQCRSN----FLFTRGIRAVRGGPPRLLSSRESIHPLSVYGQLSLEHRFRFGLNGKIKRST

Q6L3C9 Uncharacterized protein ycf687.5e-1363.49Show/hide
Query:  GEIQCRSN----FLFTRGIRAVRGGPPRLLSSRESIHPLSVYGQLSLEHRFRFGLNGKIKRST
        G IQ RS+    F    G     GGPPRLLSSRESIHPLSVYG+LSLEHR RF LNGK++  T
Subjt:  GEIQCRSN----FLFTRGIRAVRGGPPRLLSSRESIHPLSVYGQLSLEHRFRFGLNGKIKRST

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATACGCCTGACCCTGAGATGTGGATCATCCAAGGCACATTAGCATGGCGTACTTCTCCTGAGGATAGATGGGGCGATTCAGGTGAGATCCAATGTAGATCCAACTT
TCTATTCACTCGTGGGATCCGGGCGGTCCGGGGGGGACCACCTCGGCTCCTCTCTTCTCGAGAATCCATACATCCCTTATCAGTATATGGACAGCTATCTCTCGAGCACA
GGTTTAGGTTCGGCCTCAATGGGAAAATAAAACGGAGCACCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGATACGCCTGACCCTGAGATGTGGATCATCCAAGGCACATTAGCATGGCGTACTTCTCCTGAGGATAGATGGGGCGATTCAGGTGAGATCCAATGTAGATCCAACTT
TCTATTCACTCGTGGGATCCGGGCGGTCCGGGGGGGACCACCTCGGCTCCTCTCTTCTCGAGAATCCATACATCCCTTATCAGTATATGGACAGCTATCTCTCGAGCACA
GGTTTAGGTTCGGCCTCAATGGGAAAATAAAACGGAGCACCTAA
Protein sequenceShow/hide protein sequence
MDTPDPEMWIIQGTLAWRTSPEDRWGDSGEIQCRSNFLFTRGIRAVRGGPPRLLSSRESIHPLSVYGQLSLEHRFRFGLNGKIKRST