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Lsi09G003620 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi09G003620
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionprotein LITTLE ZIPPER 2-like
Genome locationchr09:3729749..3730376
RNA-Seq ExpressionLsi09G003620
SyntenyLsi09G003620
Gene Ontology termsNA
InterPro domainsIPR039312 - Protein LITTLE ZIPPER


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8647881.1 hypothetical protein Csa_000025 [Cucumis sativus]1.6e-3888.46Show/hide
Query:  MCISATQSVLFHTIQSSKNRRSLKRSKLQVLRLTRGLLFCLSRRRCEEKLGKDIELKNLQLYLENQTIIEENEKLREKANILHQENLALMTEFQKKFPHL
        MC+SATQSVLFHTIQSSKNRRS KRS  QVLRLT       SRRRCEEKLGKDIELKNLQLYLENQTIIEENEKLREKANILHQENLAL+TEFQKKFPHL
Subjt:  MCISATQSVLFHTIQSSKNRRSLKRSKLQVLRLTRGLLFCLSRRRCEEKLGKDIELKNLQLYLENQTIIEENEKLREKANILHQENLALMTEFQKKFPHL

Query:  EQRK
        EQRK
Subjt:  EQRK
KAG6579456.1 Protein LITTLE ZIPPER 2, partial [Cucurbita argyrosperma subsp. sororia]1.4e-3480.77Show/hide
Query:  MCISATQSVLFHTIQSSKNRRSLKRSKLQVLRLTRGLLFCLSRRRCEEKLGKDIELKNLQLYLENQTIIEENEKLREKANILHQENLALMTEFQKKFPHL
        MCI ATQS+LFH IQ+SKN+R  KRSKLQVLRLT        RRRCEEKLGKDIELKNLQLYL+NQTII+EN+KLREKANILHQEN+ALMTEFQKKFPHL
Subjt:  MCISATQSVLFHTIQSSKNRRSLKRSKLQVLRLTRGLLFCLSRRRCEEKLGKDIELKNLQLYLENQTIIEENEKLREKANILHQENLALMTEFQKKFPHL

Query:  EQRK
         QRK
Subjt:  EQRK
KAG7036101.1 Protein LITTLE ZIPPER 2, partial [Cucurbita argyrosperma subsp. argyrosperma]1.8e-3177.88Show/hide
Query:  MCISATQSVLFHTIQSSKNRRSLKRSKLQVLRLTRGLLFCLSRRRCEEKLGKDIELKNLQLYLENQTIIEENEKLREKANILHQENLALMTEFQKKFPHL
        MCI+ATQ +LFH I +SKNRR LKRSKLQV RL+        RR  EEK GKDIELKNLQLYLENQTIIEENEKLREKANILHQENLALMTEF KKFPH 
Subjt:  MCISATQSVLFHTIQSSKNRRSLKRSKLQVLRLTRGLLFCLSRRRCEEKLGKDIELKNLQLYLENQTIIEENEKLREKANILHQENLALMTEFQKKFPHL

Query:  EQRK
        +QRK
Subjt:  EQRK
XP_022922429.1 protein LITTLE ZIPPER 1-like [Cucurbita moschata]1.6e-3582.69Show/hide
Query:  MCISATQSVLFHTIQSSKNRRSLKRSKLQVLRLTRGLLFCLSRRRCEEKLGKDIELKNLQLYLENQTIIEENEKLREKANILHQENLALMTEFQKKFPHL
        MCISATQS+LFH IQ+SKNRR  KRSKLQVLRLT        RRRCEEKLGKDIELKNLQLYL+NQTII+EN+KLREKANILHQEN+ALMTEFQKKFPHL
Subjt:  MCISATQSVLFHTIQSSKNRRSLKRSKLQVLRLTRGLLFCLSRRRCEEKLGKDIELKNLQLYLENQTIIEENEKLREKANILHQENLALMTEFQKKFPHL

Query:  EQRK
         QRK
Subjt:  EQRK
XP_023534553.1 protein LITTLE ZIPPER 2-like [Cucurbita pepo subsp. pepo]3.7e-3278.85Show/hide
Query:  MCISATQSVLFHTIQSSKNRRSLKRSKLQVLRLTRGLLFCLSRRRCEEKLGKDIELKNLQLYLENQTIIEENEKLREKANILHQENLALMTEFQKKFPHL
        MCI+ATQ +LFH I +SKNRR LKRSKLQV RL+R       RR  EEK GKDIELKNLQLYLENQTIIEENEKLREKANILHQENLALMTEF KKFPH 
Subjt:  MCISATQSVLFHTIQSSKNRRSLKRSKLQVLRLTRGLLFCLSRRRCEEKLGKDIELKNLQLYLENQTIIEENEKLREKANILHQENLALMTEFQKKFPHL

Query:  EQRK
        +QRK
Subjt:  EQRK
TrEMBL top hitse value%identityAlignment
A0A0A0KKF8 Uncharacterized protein3.7e-3887.5Show/hide
Query:  MCISATQSVLFHTIQSSKNRRSLKRSKLQVLRLTRGLLFCLSRRRCEEKLGKDIELKNLQLYLENQTIIEENEKLREKANILHQENLALMTEFQKKFPHL
        MC+SATQSVLFHTIQSSKNRRS KRS  QVLRLT        RRRCEEKLGKDIELKNLQLYLENQTIIEENEKLREKANILHQENLAL+TEFQKKFPHL
Subjt:  MCISATQSVLFHTIQSSKNRRSLKRSKLQVLRLTRGLLFCLSRRRCEEKLGKDIELKNLQLYLENQTIIEENEKLREKANILHQENLALMTEFQKKFPHL

Query:  EQRK
        EQRK
Subjt:  EQRK
A0A5J4ZU38 Uncharacterized protein2.9e-2260.75Show/hide
Query:  MCISATQSVLF----HTIQSSKNR-RSLKRSKLQVLRLTRGLLFCLSRRRCEEKLGKDIELKNLQLYLENQTIIEENEKLREKANILHQENLALMTEFQK
        MCIS T+ +       T+ SS+ + RS KRSK+QV RLTR       +RRCEEK+GKD++LKNL+LY+EN +I+EENEKLR+KAN+LHQENLALM+EFQK
Subjt:  MCISATQSVLF----HTIQSSKNR-RSLKRSKLQVLRLTRGLLFCLSRRRCEEKLGKDIELKNLQLYLENQTIIEENEKLREKANILHQENLALMTEFQK

Query:  KFPHLEQ
        KF HL++
Subjt:  KFPHLEQ
A0A6J1DZF5 protein LITTLE ZIPPER 2-like isoform X29.9e-3178.64Show/hide
Query:  MCISATQSVLFHTIQSSKNRRSLKRSKLQVLRLTRGLLFCLSRRRC-EEKLGKDIELKNLQLYLENQTIIEENEKLREKANILHQENLALMTEFQKKFPH
        MCISAT+S  FH I +SKNRR LKRSKLQV RLT       SRRRC EEK+GKDIELKNLQLYLENQTIIEENEKLRE+ANILHQENLALMTE QKKF H
Subjt:  MCISATQSVLFHTIQSSKNRRSLKRSKLQVLRLTRGLLFCLSRRRC-EEKLGKDIELKNLQLYLENQTIIEENEKLREKANILHQENLALMTEFQKKFPH

Query:  LEQ
        L++
Subjt:  LEQ
A0A6J1E319 protein LITTLE ZIPPER 2-like isoform X16.4e-3077.45Show/hide
Query:  MCISATQSVLFHTIQSSKNRRSLKRSKLQVLRLTRGLLFCLSRRRCEEKLGKDIELKNLQLYLENQTIIEENEKLREKANILHQENLALMTEFQKKFPHL
        MCISAT+S  FH I +SKNRR LKRSKLQV RLTR       RR  EEK+GKDIELKNLQLYLENQTIIEENEKLRE+ANILHQENLALMTE QKKF HL
Subjt:  MCISATQSVLFHTIQSSKNRRSLKRSKLQVLRLTRGLLFCLSRRRCEEKLGKDIELKNLQLYLENQTIIEENEKLREKANILHQENLALMTEFQKKFPHL

Query:  EQ
        ++
Subjt:  EQ
A0A6J1E3C5 protein LITTLE ZIPPER 1-like7.8e-3682.69Show/hide
Query:  MCISATQSVLFHTIQSSKNRRSLKRSKLQVLRLTRGLLFCLSRRRCEEKLGKDIELKNLQLYLENQTIIEENEKLREKANILHQENLALMTEFQKKFPHL
        MCISATQS+LFH IQ+SKNRR  KRSKLQVLRLT        RRRCEEKLGKDIELKNLQLYL+NQTII+EN+KLREKANILHQEN+ALMTEFQKKFPHL
Subjt:  MCISATQSVLFHTIQSSKNRRSLKRSKLQVLRLTRGLLFCLSRRRCEEKLGKDIELKNLQLYLENQTIIEENEKLREKANILHQENLALMTEFQKKFPHL

Query:  EQRK
         QRK
Subjt:  EQRK
SwissProt top hitse value%identityAlignment
F4IG60 Protein LITTLE ZIPPER 12.1e-0640.62Show/hide
Query:  MCISATQSVLFHTIQSSKNRRSLKRSKLQVLRLTRGLLFCLSRRRCEEKLGKDIELKNLQLYLENQTIIEENEKLREKANILHQENLALMTEFQKK
        MC+S+++     T   +  R  L       +R+ R     LSRRR   +  K +E+ NL+LY+ENQ II ENEKL++KA +LHQEN  L +  Q K
Subjt:  MCISATQSVLFHTIQSSKNRRSLKRSKLQVLRLTRGLLFCLSRRRCEEKLGKDIELKNLQLYLENQTIIEENEKLREKANILHQENLALMTEFQKK
Q9LZX5 Protein LITTLE ZIPPER 21.1e-0541.56Show/hide
Query:  RSLKRSKLQVLRLTRGLLFCLSRRRCEEKLGKDIELKNLQLYLENQTIIEENEKLREKANILHQENLALMTEFQKKF
        +S  ++ L++L LTR       RR  +E+  K++E++NL+L++ENQ+II ENE L++KA +LH EN AL      K+
Subjt:  RSLKRSKLQVLRLTRGLLFCLSRRRCEEKLGKDIELKNLQLYLENQTIIEENEKLREKANILHQENLALMTEFQKKF
Arabidopsis top hitse value%identityAlignment
AT2G45450.1 protein binding1.5e-0740.62Show/hide
Query:  MCISATQSVLFHTIQSSKNRRSLKRSKLQVLRLTRGLLFCLSRRRCEEKLGKDIELKNLQLYLENQTIIEENEKLREKANILHQENLALMTEFQKK
        MC+S+++     T   +  R  L       +R+ R     LSRRR   +  K +E+ NL+LY+ENQ II ENEKL++KA +LHQEN  L +  Q K
Subjt:  MCISATQSVLFHTIQSSKNRRSLKRSKLQVLRLTRGLLFCLSRRRCEEKLGKDIELKNLQLYLENQTIIEENEKLREKANILHQENLALMTEFQKK
AT3G60890.1 protein binding7.5e-0741.56Show/hide
Query:  RSLKRSKLQVLRLTRGLLFCLSRRRCEEKLGKDIELKNLQLYLENQTIIEENEKLREKANILHQENLALMTEFQKKF
        +S  ++ L++L LTR       RR  +E+  K++E++NL+L++ENQ+II ENE L++KA +LH EN AL      K+
Subjt:  RSLKRSKLQVLRLTRGLLFCLSRRRCEEKLGKDIELKNLQLYLENQTIIEENEKLREKANILHQENLALMTEFQKKF
AT3G60890.2 protein binding1.5e-0742.86Show/hide
Query:  RSLKRSKLQVLRLTRGLLFCLSRRRCEEKLGKDIELKNLQLYLENQTIIEENEKLREKANILHQENLALMTEFQKKF
        +S  ++ L++L LT       SRRR   K  K++E++NL+L++ENQ+II ENE L++KA +LH EN AL      K+
Subjt:  RSLKRSKLQVLRLTRGLLFCLSRRRCEEKLGKDIELKNLQLYLENQTIIEENEKLREKANILHQENLALMTEFQKKF

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGCATCAGTGCAACACAGAGTGTTCTGTTTCATACAATTCAGAGTTCCAAGAACAGGAGAAGTTTAAAAAGATCCAAACTTCAAGTTCTGAGGCTTACTAGGGGACT
TTTGTTTTGTCTTAGCAGGAGGAGATGTGAAGAGAAGCTGGGGAAGGATATTGAGCTGAAGAATCTGCAGCTATATCTGGAGAATCAGACCATAATTGAAGAGAATGAGA
AGCTAAGAGAGAAAGCCAATATCCTTCATCAAGAGAATTTGGCTTTAATGACCGAGTTTCAGAAAAAATTCCCACATTTGGAACAGAGAAAGTGA
mRNA sequenceShow/hide mRNA sequence
GGGAGTTCGTAGTGTCACAAGTCACTAGTTATTAACAATGTCTAAGGCCTTAGCCACAGGATAAAAGGAGTGCTTAATCAGAAGTCCACCAGCCATTATTATTATTAGTA
CAATTTGCTTTCCCTACCTCTTCTTTTTTCTCTGTCCCGTGAGTCTACACAAGTCTATATAAGTATGAGCTTTAGTCTCACTGATTCCCCTGCAACTTCCATACAATATT
CTACCAGAAAGAAAGGAAAAAGTTAAGAAGCTGCCATAGAAGAATAATGTGCATCAGTGCAACACAGAGTGTTCTGTTTCATACAATTCAGAGTTCCAAGAACAGGAGAA
GTTTAAAAAGATCCAAACTTCAAGTTCTGAGGCTTACTAGGGGACTTTTGTTTTGTCTTAGCAGGAGGAGATGTGAAGAGAAGCTGGGGAAGGATATTGAGCTGAAGAAT
CTGCAGCTATATCTGGAGAATCAGACCATAATTGAAGAGAATGAGAAGCTAAGAGAGAAAGCCAATATCCTTCATCAAGAGAATTTGGCTTTAATGACCGAGTTTCAGAA
AAAATTCCCACATTTGGAACAGAGAAAGTGA
Protein sequenceShow/hide protein sequence
MCISATQSVLFHTIQSSKNRRSLKRSKLQVLRLTRGLLFCLSRRRCEEKLGKDIELKNLQLYLENQTIIEENEKLREKANILHQENLALMTEFQKKFPHLEQRK