; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi09G004030 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi09G004030
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description3-oxoacyl-[acyl-carrier-protein] synthase
Genome locationchr09:4242194..4243907
RNA-Seq ExpressionLsi09G004030
SyntenyLsi09G004030
Gene Ontology termsGO:0006633 - fatty acid biosynthetic process (biological process)
GO:0004315 - 3-oxoacyl-[acyl-carrier-protein] synthase activity (molecular function)
InterPro domainsIPR016039 - Thiolase-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004147590.2 3-oxoacyl-[acyl-carrier-protein] synthase 3 A, chloroplastic [Cucumis sativus]2.8e-5092.98Show/hide
Query:  MANTSGFFATSVPSLRARNLPLGGSFRSGFRSSDGISKVIFCSSSLGAEKVSSGASPSESRVPRIVTRGCKLVGCGSAVPSLQISNDDLAKLVDTNDEWI
        MANTSGFFATSVPSLR RN PLG  FRSGFRSSD I KVIFCSSS+GAEKVSSGASPSESRVPRI+TRGCKLVGCGSAVPSLQISNDDLAKLVDTNDEWI
Subjt:  MANTSGFFATSVPSLRARNLPLGGSFRSGFRSSDGISKVIFCSSSLGAEKVSSGASPSESRVPRIVTRGCKLVGCGSAVPSLQISNDDLAKLVDTNDEWI

Query:  SVRTGIRNRRVIAG
        SVRTGIRNRRVIAG
Subjt:  SVRTGIRNRRVIAG

XP_008437123.1 PREDICTED: 3-oxoacyl-[acyl-carrier-protein] synthase 3 A, chloroplastic [Cucumis melo]4.0e-5294.74Show/hide
Query:  MANTSGFFATSVPSLRARNLPLGGSFRSGFRSSDGISKVIFCSSSLGAEKVSSGASPSESRVPRIVTRGCKLVGCGSAVPSLQISNDDLAKLVDTNDEWI
        MANTSGFFATSVPSLR RN PLGGSFRSGFRSSDGI KVIFCS+S+GAEKVSSGASPSESRVPRI+TRGCKLVGCGSAVPSLQISNDDLAKLVDTNDEWI
Subjt:  MANTSGFFATSVPSLRARNLPLGGSFRSGFRSSDGISKVIFCSSSLGAEKVSSGASPSESRVPRIVTRGCKLVGCGSAVPSLQISNDDLAKLVDTNDEWI

Query:  SVRTGIRNRRVIAG
        SVRTGIRNRRVIAG
Subjt:  SVRTGIRNRRVIAG

XP_022922371.1 3-oxoacyl-[acyl-carrier-protein] synthase 3 A, chloroplastic [Cucurbita moschata]1.4e-4991.23Show/hide
Query:  MANTSGFFATSVPSLRARNLPLGGSFRSGFRSSDGISKVIFCSSSLGAEKVSSGASPSESRVPRIVTRGCKLVGCGSAVPSLQISNDDLAKLVDTNDEWI
        MANTSGFFATS+PSLR RNLPL  SFRSGFRSSDGISKVIFCSSS+G EKVSSGASPSESR+PR+V+RGCKLVGCGSAVPSLQISNDDLAKLVDTNDEWI
Subjt:  MANTSGFFATSVPSLRARNLPLGGSFRSGFRSSDGISKVIFCSSSLGAEKVSSGASPSESRVPRIVTRGCKLVGCGSAVPSLQISNDDLAKLVDTNDEWI

Query:  SVRTGIRNRRVIAG
        SVRTGIRNRRVI+G
Subjt:  SVRTGIRNRRVIAG

XP_022969872.1 3-oxoacyl-[acyl-carrier-protein] synthase 3 A, chloroplastic [Cucurbita maxima]6.3e-5091.23Show/hide
Query:  MANTSGFFATSVPSLRARNLPLGGSFRSGFRSSDGISKVIFCSSSLGAEKVSSGASPSESRVPRIVTRGCKLVGCGSAVPSLQISNDDLAKLVDTNDEWI
        MANTSGFFATS+PSLR RNLPL  SFRSGFRSSDGIS+VIFCSSS+G EKVSSGASPSESR+PR+VTRGCKLVGCGSAVPSLQISNDDLAKLVDTNDEWI
Subjt:  MANTSGFFATSVPSLRARNLPLGGSFRSGFRSSDGISKVIFCSSSLGAEKVSSGASPSESRVPRIVTRGCKLVGCGSAVPSLQISNDDLAKLVDTNDEWI

Query:  SVRTGIRNRRVIAG
        SVRTGIRNRRVI+G
Subjt:  SVRTGIRNRRVIAG

XP_038876119.1 3-oxoacyl-[acyl-carrier-protein] synthase 3 A, chloroplastic [Benincasa hispida]1.4e-5296.49Show/hide
Query:  MANTSGFFATSVPSLRARNLPLGGSFRSGFRSSDGISKVIFCSSSLGAEKVSSGASPSESRVPRIVTRGCKLVGCGSAVPSLQISNDDLAKLVDTNDEWI
        MANTSGFFATSVPSLR RNLPLGGSFRSGFRSSDGISK IFCSSSLGAEKVSSGASPSESRVPRIV RGCKLVGCGSAVPSL+ISNDDLAKLVDTNDEWI
Subjt:  MANTSGFFATSVPSLRARNLPLGGSFRSGFRSSDGISKVIFCSSSLGAEKVSSGASPSESRVPRIVTRGCKLVGCGSAVPSLQISNDDLAKLVDTNDEWI

Query:  SVRTGIRNRRVIAG
        SVRTGIRNRRVIAG
Subjt:  SVRTGIRNRRVIAG

TrEMBL top hitse value%identityAlignment
A0A0A0KP71 Uncharacterized protein1.4e-5092.98Show/hide
Query:  MANTSGFFATSVPSLRARNLPLGGSFRSGFRSSDGISKVIFCSSSLGAEKVSSGASPSESRVPRIVTRGCKLVGCGSAVPSLQISNDDLAKLVDTNDEWI
        MANTSGFFATSVPSLR RN PLG  FRSGFRSSD I KVIFCSSS+GAEKVSSGASPSESRVPRI+TRGCKLVGCGSAVPSLQISNDDLAKLVDTNDEWI
Subjt:  MANTSGFFATSVPSLRARNLPLGGSFRSGFRSSDGISKVIFCSSSLGAEKVSSGASPSESRVPRIVTRGCKLVGCGSAVPSLQISNDDLAKLVDTNDEWI

Query:  SVRTGIRNRRVIAG
        SVRTGIRNRRVIAG
Subjt:  SVRTGIRNRRVIAG

A0A1S3ATE0 3-oxoacyl-[acyl-carrier-protein] synthase 3 A, chloroplastic1.9e-5294.74Show/hide
Query:  MANTSGFFATSVPSLRARNLPLGGSFRSGFRSSDGISKVIFCSSSLGAEKVSSGASPSESRVPRIVTRGCKLVGCGSAVPSLQISNDDLAKLVDTNDEWI
        MANTSGFFATSVPSLR RN PLGGSFRSGFRSSDGI KVIFCS+S+GAEKVSSGASPSESRVPRI+TRGCKLVGCGSAVPSLQISNDDLAKLVDTNDEWI
Subjt:  MANTSGFFATSVPSLRARNLPLGGSFRSGFRSSDGISKVIFCSSSLGAEKVSSGASPSESRVPRIVTRGCKLVGCGSAVPSLQISNDDLAKLVDTNDEWI

Query:  SVRTGIRNRRVIAG
        SVRTGIRNRRVIAG
Subjt:  SVRTGIRNRRVIAG

A0A5A7T9W0 3-oxoacyl-(Acyl-carrier-protein) synthase 3 A1.9e-5294.74Show/hide
Query:  MANTSGFFATSVPSLRARNLPLGGSFRSGFRSSDGISKVIFCSSSLGAEKVSSGASPSESRVPRIVTRGCKLVGCGSAVPSLQISNDDLAKLVDTNDEWI
        MANTSGFFATSVPSLR RN PLGGSFRSGFRSSDGI KVIFCS+S+GAEKVSSGASPSESRVPRI+TRGCKLVGCGSAVPSLQISNDDLAKLVDTNDEWI
Subjt:  MANTSGFFATSVPSLRARNLPLGGSFRSGFRSSDGISKVIFCSSSLGAEKVSSGASPSESRVPRIVTRGCKLVGCGSAVPSLQISNDDLAKLVDTNDEWI

Query:  SVRTGIRNRRVIAG
        SVRTGIRNRRVIAG
Subjt:  SVRTGIRNRRVIAG

A0A6J1E3Y7 3-oxoacyl-[acyl-carrier-protein] synthase 3 A, chloroplastic6.8e-5091.23Show/hide
Query:  MANTSGFFATSVPSLRARNLPLGGSFRSGFRSSDGISKVIFCSSSLGAEKVSSGASPSESRVPRIVTRGCKLVGCGSAVPSLQISNDDLAKLVDTNDEWI
        MANTSGFFATS+PSLR RNLPL  SFRSGFRSSDGISKVIFCSSS+G EKVSSGASPSESR+PR+V+RGCKLVGCGSAVPSLQISNDDLAKLVDTNDEWI
Subjt:  MANTSGFFATSVPSLRARNLPLGGSFRSGFRSSDGISKVIFCSSSLGAEKVSSGASPSESRVPRIVTRGCKLVGCGSAVPSLQISNDDLAKLVDTNDEWI

Query:  SVRTGIRNRRVIAG
        SVRTGIRNRRVI+G
Subjt:  SVRTGIRNRRVIAG

A0A6J1HXJ0 3-oxoacyl-[acyl-carrier-protein] synthase 3 A, chloroplastic3.1e-5091.23Show/hide
Query:  MANTSGFFATSVPSLRARNLPLGGSFRSGFRSSDGISKVIFCSSSLGAEKVSSGASPSESRVPRIVTRGCKLVGCGSAVPSLQISNDDLAKLVDTNDEWI
        MANTSGFFATS+PSLR RNLPL  SFRSGFRSSDGIS+VIFCSSS+G EKVSSGASPSESR+PR+VTRGCKLVGCGSAVPSLQISNDDLAKLVDTNDEWI
Subjt:  MANTSGFFATSVPSLRARNLPLGGSFRSGFRSSDGISKVIFCSSSLGAEKVSSGASPSESRVPRIVTRGCKLVGCGSAVPSLQISNDDLAKLVDTNDEWI

Query:  SVRTGIRNRRVIAG
        SVRTGIRNRRVI+G
Subjt:  SVRTGIRNRRVIAG

SwissProt top hitse value%identityAlignment
P49243 3-oxoacyl-[acyl-carrier-protein] synthase III, chloroplastic5.4e-2860.34Show/hide
Query:  MANTSGFFA-TSVPSLRAR-NLPLGGSFRSGFRSSDGISKVIFCSSSLGAEKVSSGASPSESRVPRIVTRGCKLVGCGSAVPSLQISNDDLAKLVDTNDE
        MAN SGFF   S+P+LR+R ++P+  S  SGF  S+  SK + CSS    +K +S +SPS+ + PR+V  GCKL+GCGSAVPSL ISNDDLAK+VDTNDE
Subjt:  MANTSGFFA-TSVPSLRAR-NLPLGGSFRSGFRSSDGISKVIFCSSSLGAEKVSSGASPSESRVPRIVTRGCKLVGCGSAVPSLQISNDDLAKLVDTNDE

Query:  WISVRTGIRNRRVIAG
        WI+ RTGIRNRRV++G
Subjt:  WISVRTGIRNRRVIAG

P49244 3-oxoacyl-[acyl-carrier-protein] synthase 3 A, chloroplastic3.8e-2960Show/hide
Query:  MANTSGFFATSVPSLRARNLPLGGSFRSGFRSSDGISKVIFCSSSL-GAEKVSSGASPSESRVPRIVTRGCKLVGCGSAVPSLQISNDDLAKLVDTNDEW
        MAN SGF  +SVP+LR    P      S   SSD + K +FC S++ G+++ S G    +SR PR+V+RGCKL+G GSA+PSLQISNDDLAK+VDTNDEW
Subjt:  MANTSGFFATSVPSLRARNLPLGGSFRSGFRSSDGISKVIFCSSSL-GAEKVSSGASPSESRVPRIVTRGCKLVGCGSAVPSLQISNDDLAKLVDTNDEW

Query:  ISVRTGIRNRRVIAG
        ISVRTGIRNRRV+ G
Subjt:  ISVRTGIRNRRVIAG

P49245 3-oxoacyl-[acyl-carrier-protein] synthase 3 B, chloroplastic7.6e-3062.07Show/hide
Query:  MANTSGFFATSVPSL-RARNLPLGGSFRSGFRSSDGISKVIFCSSSL-GAEKVSSGASPSESRVPRIVTRGCKLVGCGSAVPSLQISNDDLAKLVDTNDE
        MAN  GF   SVP++ RA      G   SGF S+D ISK +FC S + GA+K +SG S +E R PR+V+RGCKLVG GSA+P+LQ+SNDDL+K+VDTNDE
Subjt:  MANTSGFFATSVPSL-RARNLPLGGSFRSGFRSSDGISKVIFCSSSL-GAEKVSSGASPSESRVPRIVTRGCKLVGCGSAVPSLQISNDDLAKLVDTNDE

Query:  WISVRTGIRNRRVIAG
        WISVRTGIRNRRV+ G
Subjt:  WISVRTGIRNRRVIAG

Q07510 3-oxoacyl-[acyl-carrier-protein] synthase III, chloroplastic1.4e-2861.21Show/hide
Query:  MANTSGFFATSVP-SLRARNLPLGGSFRSGFRSSDGISKVIFCSSSLGAEK-VSSGASPSESRVPRIVTRGCKLVGCGSAVPSLQISNDDLAKLVDTNDE
        MA + GFF+ SVP SL  +  P  G   SGF S  GISK +FCSS   +EK  ++G S SESRV R+V RGCKLVGCGSAVP LQISNDDL+K V+T+DE
Subjt:  MANTSGFFATSVP-SLRARNLPLGGSFRSGFRSSDGISKVIFCSSSLGAEK-VSSGASPSESRVPRIVTRGCKLVGCGSAVPSLQISNDDLAKLVDTNDE

Query:  WISVRTGIRNRRVIAG
        WI+ RTGIR R V++G
Subjt:  WISVRTGIRNRRVIAG

Q92GC1 3-oxoacyl-[acyl-carrier-protein] synthase 31.1e-0956.25Show/hide
Query:  CKLVGCGSAVPSLQISNDDLAKLVDTNDEWISVRTGIRNRRVIAGVCY
        CK++GCG  +PS  +SND+LAK VDTNDEWI  RTGI  R +     Y
Subjt:  CKLVGCGSAVPSLQISNDDLAKLVDTNDEWISVRTGIRNRRVIAGVCY

Arabidopsis top hitse value%identityAlignment
AT1G62640.1 3-ketoacyl-acyl carrier protein synthase III3.9e-2960.34Show/hide
Query:  MANTSGFFA-TSVPSLRAR-NLPLGGSFRSGFRSSDGISKVIFCSSSLGAEKVSSGASPSESRVPRIVTRGCKLVGCGSAVPSLQISNDDLAKLVDTNDE
        MAN SGFF   S+P+LR+R ++P+  S  SGF  S+  SK + CSS    +K +S +SPS+ + PR+V  GCKL+GCGSAVPSL ISNDDLAK+VDTNDE
Subjt:  MANTSGFFA-TSVPSLRAR-NLPLGGSFRSGFRSSDGISKVIFCSSSLGAEKVSSGASPSESRVPRIVTRGCKLVGCGSAVPSLQISNDDLAKLVDTNDE

Query:  WISVRTGIRNRRVIAG
        WI+ RTGIRNRRV++G
Subjt:  WISVRTGIRNRRVIAG

AT1G62640.2 3-ketoacyl-acyl carrier protein synthase III3.9e-2960.34Show/hide
Query:  MANTSGFFA-TSVPSLRAR-NLPLGGSFRSGFRSSDGISKVIFCSSSLGAEKVSSGASPSESRVPRIVTRGCKLVGCGSAVPSLQISNDDLAKLVDTNDE
        MAN SGFF   S+P+LR+R ++P+  S  SGF  S+  SK + CSS    +K +S +SPS+ + PR+V  GCKL+GCGSAVPSL ISNDDLAK+VDTNDE
Subjt:  MANTSGFFA-TSVPSLRAR-NLPLGGSFRSGFRSSDGISKVIFCSSSLGAEKVSSGASPSESRVPRIVTRGCKLVGCGSAVPSLQISNDDLAKLVDTNDE

Query:  WISVRTGIRNRRVIAG
        WI+ RTGIRNRRV++G
Subjt:  WISVRTGIRNRRVIAG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCAATACATCTGGGTTCTTTGCAACATCAGTCCCGAGTCTAAGGGCGAGGAATTTGCCATTAGGAGGCAGTTTTCGATCTGGGTTTAGATCATCTGATGGAATATC
TAAAGTAATATTCTGTTCTAGTTCTCTTGGGGCAGAGAAGGTTTCTTCTGGAGCTTCTCCTTCTGAATCTCGAGTGCCCAGGATCGTCACTAGAGGCTGCAAGCTAGTTG
GGTGTGGTTCAGCTGTACCAAGTCTTCAGATTTCAAATGATGATCTTGCAAAATTGGTTGATACAAATGATGAATGGATATCTGTTCGCACTGGGATTCGCAATCGAAGG
GTGATTGCAGGTGTGTGCTATCTCATGGAGCAAACAGTAGGAGTCTACAACCAATGA
mRNA sequenceShow/hide mRNA sequence
AAGAGGGCAAGATTTATACGTTTCTCTTTTTCCTCCTAACTACAAGAGACTTATAAATGAAAAATCAAATCTTGGTGGGGGAAGGGCAGGGCAAGGCAAGGCAATGCATG
TCTGATCCTTCTGTTTGAGCTGAAATTGCTAAACATTGGAGTTTCCGCTATTTGGGTTTTGGAGTAATCGCCCCCATTTTCTCTTTCTCTTTCTCTCTGTCTCTCTCTTT
TTTCTCTCGGACCTTTCTAGGATTCTGCAGAATAAGCATTGAAAATCGCCATTTCGATCTCTTCCCTCTTATGGGTTCTGGGTGTGGATGCTGTTTTCATCCCATTTTTC
ACTTTTCTTGAGTTGTTGTAACTTTCCCAAGTCTCTCTCTGTTTTCTGTCTTGTGGGTTCTGAGTGTTTAGTGAAATGGCCAATACATCTGGGTTCTTTGCAACATCAGT
CCCGAGTCTAAGGGCGAGGAATTTGCCATTAGGAGGCAGTTTTCGATCTGGGTTTAGATCATCTGATGGAATATCTAAAGTAATATTCTGTTCTAGTTCTCTTGGGGCAG
AGAAGGTTTCTTCTGGAGCTTCTCCTTCTGAATCTCGAGTGCCCAGGATCGTCACTAGAGGCTGCAAGCTAGTTGGGTGTGGTTCAGCTGTACCAAGTCTTCAGATTTCA
AATGATGATCTTGCAAAATTGGTTGATACAAATGATGAATGGATATCTGTTCGCACTGGGATTCGCAATCGAAGGGTGATTGCAGGTGTGTGCTATCTCATGGAGCAAAC
AGTAGGAGTCTACAACCAATGA
Protein sequenceShow/hide protein sequence
MANTSGFFATSVPSLRARNLPLGGSFRSGFRSSDGISKVIFCSSSLGAEKVSSGASPSESRVPRIVTRGCKLVGCGSAVPSLQISNDDLAKLVDTNDEWISVRTGIRNRR
VIAGVCYLMEQTVGVYNQ