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Lsi09G004100 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi09G004100
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionBifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Genome locationchr09:4395604..4395936
RNA-Seq ExpressionLsi09G004100
SyntenyLsi09G004100
Gene Ontology termsNA
InterPro domainsIPR016140 - Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain
IPR027923 - Hydrophobic seed protein domain
IPR036312 - Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039699.1 pEARLI1-like lipid transfer protein 1 [Cucumis melo var. makuwa]1.1e-4284.55Show/hide
Query:  MASKATVSLAFLLALNLLFFSFAVSAEGDKCPIDALKLGVCAKLLGGVVDVKIGKSSCCPLIEGLVDLDAAVCLCTALKANVLGVRLNIPLDLSLILNGC
        MASKA  SL FLLALNLLFFSF  +   +KCPID LKLGVCAKLLGGVVDV+IGK+SCCPLI  LVDLDAAVCLCTALKANVLGVRLNIPLDLSLILNGC
Subjt:  MASKATVSLAFLLALNLLFFSFAVSAEGDKCPIDALKLGVCAKLLGGVVDVKIGKSSCCPLIEGLVDLDAAVCLCTALKANVLGVRLNIPLDLSLILNGC

Query:  NREIVKGFKC
        NR+I KGFKC
Subjt:  NREIVKGFKC

XP_008437106.1 PREDICTED: lipid transfer protein EARLI 1-like [Cucumis melo]8.4e-4382.73Show/hide
Query:  MASKATVSLAFLLALNLLFFSFAVSAEGDKCPIDALKLGVCAKLLGGVVDVKIGKSSCCPLIEGLVDLDAAVCLCTALKANVLGVRLNIPLDLSLILNGC
        MASKATVSLAFLLALNL+F SF  + +  KCP D LKLGVCAKLLGGVVDV+IGK+SCCPLI+GL DLDAAVCLCTALKANVLGVRLNIP+DLSLILNGC
Subjt:  MASKATVSLAFLLALNLLFFSFAVSAEGDKCPIDALKLGVCAKLLGGVVDVKIGKSSCCPLIEGLVDLDAAVCLCTALKANVLGVRLNIPLDLSLILNGC

Query:  NREIVKGFKC
        N++I KGFKC
Subjt:  NREIVKGFKC

XP_008437109.1 PREDICTED: pEARLI1-like lipid transfer protein 1 [Cucumis melo]3.2e-4281.82Show/hide
Query:  MASKATVSLAFLLALNLLFFSFAVSAEGDKCPIDALKLGVCAKLLGGVVDVKIGKSSCCPLIEGLVDLDAAVCLCTALKANVLGVRLNIPLDLSLILNGC
        MASKATVSLAFLLALNL+F SF  + + +KCPID LKLGVCAKLLGGVV V+IGK+SCCPLI+G+ DLDAAVCLCTALKANVLGVRLNIP+DLSLILNGC
Subjt:  MASKATVSLAFLLALNLLFFSFAVSAEGDKCPIDALKLGVCAKLLGGVVDVKIGKSSCCPLIEGLVDLDAAVCLCTALKANVLGVRLNIPLDLSLILNGC

Query:  NREIVKGFKC
        N++IV GFKC
Subjt:  NREIVKGFKC

XP_038876021.1 pEARLI1-like lipid transfer protein 1 [Benincasa hispida]2.2e-4385.59Show/hide
Query:  MASKATVSLAFLLALNLLFFSFAVSAEGD-KCPIDALKLGVCAKLLGGVVDVKIGKSSCCPLIEGLVDLDAAVCLCTALKANVLGVRLNIPLDLSLILNG
        MASKATVSL+FLLALNLLFFSF +SA+ D KCPIDALKLGVCAKLLGGVVDV+IGK+SCCPLI+GL DLDAAVCLCT+L+ANVLGVRLNIP+DLSLILNG
Subjt:  MASKATVSLAFLLALNLLFFSFAVSAEGD-KCPIDALKLGVCAKLLGGVVDVKIGKSSCCPLIEGLVDLDAAVCLCTALKANVLGVRLNIPLDLSLILNG

Query:  CNREIVKGFKC
        CNR I KGF+C
Subjt:  CNREIVKGFKC

XP_038876023.1 pEARLI1-like lipid transfer protein 1 [Benincasa hispida]3.8e-4382.73Show/hide
Query:  MASKATVSLAFLLALNLLFFSFAVSAEGDKCPIDALKLGVCAKLLGGVVDVKIGKSSCCPLIEGLVDLDAAVCLCTALKANVLGVRLNIPLDLSLILNGC
        MASKATVSL++LLALNLLFFSF  + +  KCPIDALKLGVCAKLLGGVVDV+IGK+SCCPLI+GL DLDAAVCLCT+L+ANVLGVRLNIP+DLSLILNGC
Subjt:  MASKATVSLAFLLALNLLFFSFAVSAEGDKCPIDALKLGVCAKLLGGVVDVKIGKSSCCPLIEGLVDLDAAVCLCTALKANVLGVRLNIPLDLSLILNGC

Query:  NREIVKGFKC
        NR I KGF+C
Subjt:  NREIVKGFKC

TrEMBL top hitse value%identityAlignment
A0A1S3ATC3 lipid transfer protein EARLI 1-like4.1e-4382.73Show/hide
Query:  MASKATVSLAFLLALNLLFFSFAVSAEGDKCPIDALKLGVCAKLLGGVVDVKIGKSSCCPLIEGLVDLDAAVCLCTALKANVLGVRLNIPLDLSLILNGC
        MASKATVSLAFLLALNL+F SF  + +  KCP D LKLGVCAKLLGGVVDV+IGK+SCCPLI+GL DLDAAVCLCTALKANVLGVRLNIP+DLSLILNGC
Subjt:  MASKATVSLAFLLALNLLFFSFAVSAEGDKCPIDALKLGVCAKLLGGVVDVKIGKSSCCPLIEGLVDLDAAVCLCTALKANVLGVRLNIPLDLSLILNGC

Query:  NREIVKGFKC
        N++I KGFKC
Subjt:  NREIVKGFKC

A0A1S3ATR8 pEARLI1-like lipid transfer protein 11.6e-4281.82Show/hide
Query:  MASKATVSLAFLLALNLLFFSFAVSAEGDKCPIDALKLGVCAKLLGGVVDVKIGKSSCCPLIEGLVDLDAAVCLCTALKANVLGVRLNIPLDLSLILNGC
        MASKATVSLAFLLALNL+F SF  + + +KCPID LKLGVCAKLLGGVV V+IGK+SCCPLI+G+ DLDAAVCLCTALKANVLGVRLNIP+DLSLILNGC
Subjt:  MASKATVSLAFLLALNLLFFSFAVSAEGDKCPIDALKLGVCAKLLGGVVDVKIGKSSCCPLIEGLVDLDAAVCLCTALKANVLGVRLNIPLDLSLILNGC

Query:  NREIVKGFKC
        N++IV GFKC
Subjt:  NREIVKGFKC

A0A1S3ATT0 lipid transfer protein EARLI 1-like1.6e-4281.82Show/hide
Query:  MASKATVSLAFLLALNLLFFSFAVSAEGDKCPIDALKLGVCAKLLGGVVDVKIGKSSCCPLIEGLVDLDAAVCLCTALKANVLGVRLNIPLDLSLILNGC
        MASKATVSLAFLLALNL+F SF  + +  KCPID LKLGVCAKLLGGVV V+IGK+SCCPLI+G+ DLDAAVCLCTALKANVLGVRLNIP+DLSLILNGC
Subjt:  MASKATVSLAFLLALNLLFFSFAVSAEGDKCPIDALKLGVCAKLLGGVVDVKIGKSSCCPLIEGLVDLDAAVCLCTALKANVLGVRLNIPLDLSLILNGC

Query:  NREIVKGFKC
        N++IV+GFKC
Subjt:  NREIVKGFKC

A0A5A7T8X5 Lipid transfer protein EARLI 1-like3.5e-4280.91Show/hide
Query:  MASKATVSLAFLLALNLLFFSFAVSAEGDKCPIDALKLGVCAKLLGGVVDVKIGKSSCCPLIEGLVDLDAAVCLCTALKANVLGVRLNIPLDLSLILNGC
        MASKATVSL FLLALNL+F SF  + + +KCPID LKLGVCAKLLGGVVD++IGK+SCCPLI  LVDLDAAVCLCTALKANVLG+RLNIP+DLSLILNGC
Subjt:  MASKATVSLAFLLALNLLFFSFAVSAEGDKCPIDALKLGVCAKLLGGVVDVKIGKSSCCPLIEGLVDLDAAVCLCTALKANVLGVRLNIPLDLSLILNGC

Query:  NREIVKGFKC
        N++I KGFKC
Subjt:  NREIVKGFKC

A0A5A7TEN5 PEARLI1-like lipid transfer protein 15.3e-4384.55Show/hide
Query:  MASKATVSLAFLLALNLLFFSFAVSAEGDKCPIDALKLGVCAKLLGGVVDVKIGKSSCCPLIEGLVDLDAAVCLCTALKANVLGVRLNIPLDLSLILNGC
        MASKA  SL FLLALNLLFFSF  +   +KCPID LKLGVCAKLLGGVVDV+IGK+SCCPLI  LVDLDAAVCLCTALKANVLGVRLNIPLDLSLILNGC
Subjt:  MASKATVSLAFLLALNLLFFSFAVSAEGDKCPIDALKLGVCAKLLGGVVDVKIGKSSCCPLIEGLVDLDAAVCLCTALKANVLGVRLNIPLDLSLILNGC

Query:  NREIVKGFKC
        NR+I KGFKC
Subjt:  NREIVKGFKC

SwissProt top hitse value%identityAlignment
P14009 14 kDa proline-rich protein DC2.151.2e-2345.59Show/hide
Query:  MASKATVSLAFLLALNLLFFSFAVSAE-----------------------GDKCPIDALKLGVCAKLLGGVVDVKIGKS---SCCPLIEGLVDLDAAVCL
        M SK + S+A    LN+LFF+   S E                         KCP DALKLGVCA +L  V +V IG      CC L+EGLV+L+AAVCL
Subjt:  MASKATVSLAFLLALNLLFFSFAVSAE-----------------------GDKCPIDALKLGVCAKLLGGVVDVKIGKS---SCCPLIEGLVDLDAAVCL

Query:  CTALKANVLGVRLNIPLDLSLILNGCNREIVKGFKC
        CTA+KAN+LG  LN+P+ LSL+LN C +++  GF+C
Subjt:  CTALKANVLGVRLNIPLDLSLILNGCNREIVKGFKC

Q39176 Lipid transfer protein EARLI 18.2e-2560.24Show/hide
Query:  CPIDALKLGVCAKLLGGVVDVKIGKSS---CCPLIEGLVDLDAAVCLCTALKANVLGVRLNIPLDLSLILNGCNREIVKGFKC
        CPIDAL+LGVCA +L  ++++++G+ S   CC LI+GLVDLDAA+CLCTAL+ANVLG+ LN+P+ LS++LN CNR++  GF+C
Subjt:  CPIDALKLGVCAKLLGGVVDVKIGKSS---CCPLIEGLVDLDAAVCLCTALKANVLGVRLNIPLDLSLILNGCNREIVKGFKC

Q9SU33 pEARLI1-like lipid transfer protein 31.4e-2461.45Show/hide
Query:  CPIDALKLGVCAKLLGGVVDVKIGKSS---CCPLIEGLVDLDAAVCLCTALKANVLGVRLNIPLDLSLILNGCNREIVKGFKC
        CPIDAL+LGVCA +L G+++V++G+ S   CC LI+GLVDLDAA+CLCTAL+ANVLG+ LN+P+ LS++LN CNR +   F+C
Subjt:  CPIDALKLGVCAKLLGGVVDVKIGKSS---CCPLIEGLVDLDAAVCLCTALKANVLGVRLNIPLDLSLILNGCNREIVKGFKC

Q9SU34 pEARLI1-like lipid transfer protein 28.2e-2562.65Show/hide
Query:  CPIDALKLGVCAKLLGGVVDVKIGKSS---CCPLIEGLVDLDAAVCLCTALKANVLGVRLNIPLDLSLILNGCNREIVKGFKC
        CPIDAL+LGVCA +L G+++V++G+ S   CC LI+GLVDLDAAVCLCTAL+ANVLG+ LN+P+ LS++LN CNR +   F+C
Subjt:  CPIDALKLGVCAKLLGGVVDVKIGKSS---CCPLIEGLVDLDAAVCLCTALKANVLGVRLNIPLDLSLILNGCNREIVKGFKC

Q9SU35 pEARLI1-like lipid transfer protein 15.7e-2640.62Show/hide
Query:  MASKATVSLAFLLALNLLFFSFAVS-----------------------------------------------AEGDKCPIDALKLGVCAKLLGGVVDVKI
        MASK + SLA   ALN+LFF+  V+                                               + G+ CPIDALKLGVCA +L  ++++++
Subjt:  MASKATVSLAFLLALNLLFFSFAVS-----------------------------------------------AEGDKCPIDALKLGVCAKLLGGVVDVKI

Query:  GKSS---CCPLIEGLVDLDAAVCLCTALKANVLGVRLNIPLDLSLILNGCNREIVKGFKC
        G+ S   CC LI+GLVD+DAA+CLCTAL+ANVLG+ LN+P+ LS++LN CNR++  GF+C
Subjt:  GKSS---CCPLIEGLVDLDAAVCLCTALKANVLGVRLNIPLDLSLILNGCNREIVKGFKC

Arabidopsis top hitse value%identityAlignment
AT1G62510.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein1.2e-2645.33Show/hide
Query:  MASKATVSLAFLLALNLLFFSFAVSAEGD-------------------------------------KCPIDALKLGVCAKLLGGVVDVKIGK---SSCCP
        MAS+ T SLA  L LN LFF+  +SA G+                                     KCP DALKLGVCA +L G+++V +GK     CC 
Subjt:  MASKATVSLAFLLALNLLFFSFAVSAEGD-------------------------------------KCPIDALKLGVCAKLLGGVVDVKIGK---SSCCP

Query:  LIEGLVDLDAAVCLCTALKANVLGVRLNIPLDLSLILNGCNREIVKGFKC
        LI+GL DL+AA CLCTALKAN+LG+ LNIPL LSL+LN C++++ +GF+C
Subjt:  LIEGLVDLDAAVCLCTALKANVLGVRLNIPLDLSLILNGCNREIVKGFKC

AT2G45180.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein9.0e-2749.25Show/hide
Query:  MASKATVSLAFLLALNLLFFSFAVS---------------------AEGDKCPIDALKLGVCAKLLGGVVDVKIG---KSSCCPLIEGLVDLDAAVCLCT
        MASKA    A L+ LNLLFF+F  S                     A    CP D LKLGVCA LL G+V+V +G   K+ CC L++GL +L+AAVCLCT
Subjt:  MASKATVSLAFLLALNLLFFSFAVS---------------------AEGDKCPIDALKLGVCAKLLGGVVDVKIG---KSSCCPLIEGLVDLDAAVCLCT

Query:  ALKANVLGVRLNIPLDLSLILNGCNREIVKGFKC
        ALKANVLG+ LN+P+DL+L+LN C +++  GF+C
Subjt:  ALKANVLGVRLNIPLDLSLILNGCNREIVKGFKC

AT4G12470.1 azelaic acid induced 14.1e-2740.62Show/hide
Query:  MASKATVSLAFLLALNLLFFSFAVS-----------------------------------------------AEGDKCPIDALKLGVCAKLLGGVVDVKI
        MASK + SLA   ALN+LFF+  V+                                               + G+ CPIDALKLGVCA +L  ++++++
Subjt:  MASKATVSLAFLLALNLLFFSFAVS-----------------------------------------------AEGDKCPIDALKLGVCAKLLGGVVDVKI

Query:  GKSS---CCPLIEGLVDLDAAVCLCTALKANVLGVRLNIPLDLSLILNGCNREIVKGFKC
        G+ S   CC LI+GLVD+DAA+CLCTAL+ANVLG+ LN+P+ LS++LN CNR++  GF+C
Subjt:  GKSS---CCPLIEGLVDLDAAVCLCTALKANVLGVRLNIPLDLSLILNGCNREIVKGFKC

AT4G12480.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein5.9e-2660.24Show/hide
Query:  CPIDALKLGVCAKLLGGVVDVKIGKSS---CCPLIEGLVDLDAAVCLCTALKANVLGVRLNIPLDLSLILNGCNREIVKGFKC
        CPIDAL+LGVCA +L  ++++++G+ S   CC LI+GLVDLDAA+CLCTAL+ANVLG+ LN+P+ LS++LN CNR++  GF+C
Subjt:  CPIDALKLGVCAKLLGGVVDVKIGKSS---CCPLIEGLVDLDAAVCLCTALKANVLGVRLNIPLDLSLILNGCNREIVKGFKC

AT4G12490.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein5.9e-2662.65Show/hide
Query:  CPIDALKLGVCAKLLGGVVDVKIGKSS---CCPLIEGLVDLDAAVCLCTALKANVLGVRLNIPLDLSLILNGCNREIVKGFKC
        CPIDAL+LGVCA +L G+++V++G+ S   CC LI+GLVDLDAAVCLCTAL+ANVLG+ LN+P+ LS++LN CNR +   F+C
Subjt:  CPIDALKLGVCAKLLGGVVDVKIGKSS---CCPLIEGLVDLDAAVCLCTALKANVLGVRLNIPLDLSLILNGCNREIVKGFKC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCAAAGCTACCGTCTCGCTCGCGTTTCTTCTCGCTCTCAATCTCCTTTTCTTCTCCTTCGCCGTCTCCGCTGAAGGTGACAAGTGCCCAATAGACGCTCTTAA
GCTTGGTGTTTGTGCGAAATTGCTTGGCGGTGTCGTCGATGTTAAGATCGGCAAGTCTTCTTGTTGCCCTCTGATCGAAGGGCTTGTTGATCTTGATGCTGCTGTGTGCC
TATGCACTGCTCTTAAAGCCAATGTATTGGGAGTGAGACTCAACATCCCCCTCGACCTCTCCTTGATTCTCAATGGCTGCAATAGAGAAATTGTAAAGGGCTTCAAGTGC
TGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCCAAAGCTACCGTCTCGCTCGCGTTTCTTCTCGCTCTCAATCTCCTTTTCTTCTCCTTCGCCGTCTCCGCTGAAGGTGACAAGTGCCCAATAGACGCTCTTAA
GCTTGGTGTTTGTGCGAAATTGCTTGGCGGTGTCGTCGATGTTAAGATCGGCAAGTCTTCTTGTTGCCCTCTGATCGAAGGGCTTGTTGATCTTGATGCTGCTGTGTGCC
TATGCACTGCTCTTAAAGCCAATGTATTGGGAGTGAGACTCAACATCCCCCTCGACCTCTCCTTGATTCTCAATGGCTGCAATAGAGAAATTGTAAAGGGCTTCAAGTGC
TGA
Protein sequenceShow/hide protein sequence
MASKATVSLAFLLALNLLFFSFAVSAEGDKCPIDALKLGVCAKLLGGVVDVKIGKSSCCPLIEGLVDLDAAVCLCTALKANVLGVRLNIPLDLSLILNGCNREIVKGFKC