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Lsi09G004110 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi09G004110
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionBifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Genome locationchr09:4400426..4400758
RNA-Seq ExpressionLsi09G004110
SyntenyLsi09G004110
Gene Ontology termsNA
InterPro domainsIPR016140 - Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain
IPR027923 - Hydrophobic seed protein domain
IPR036312 - Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039699.1 pEARLI1-like lipid transfer protein 1 [Cucumis melo var. makuwa]2.2e-4384.55Show/hide
Query:  MSSKATVSLAFLLALNLLFFSFVVSAEGDKCPIDALKLGVCAKLLGGVVDVKIGKSSCCPLIEGLVDLDAAVCLCTALKANVLGVRLNIPLDLSLILNGC
        M+SKA  SL FLLALNLLFFSFV +   +KCPID LKLGVCAKLLGGVVDV+IGK+SCCPLI  LVDLDAAVCLCTALKANVLGVRLNIPLDLSLILNGC
Subjt:  MSSKATVSLAFLLALNLLFFSFVVSAEGDKCPIDALKLGVCAKLLGGVVDVKIGKSSCCPLIEGLVDLDAAVCLCTALKANVLGVRLNIPLDLSLILNGC

Query:  NREVAKGFKC
        NR++AKGFKC
Subjt:  NREVAKGFKC

KAA0039700.1 lipid transfer protein EARLI 1-like [Cucumis melo var. makuwa]1.4e-4280.91Show/hide
Query:  MSSKATVSLAFLLALNLLFFSFVVSAEGDKCPIDALKLGVCAKLLGGVVDVKIGKSSCCPLIEGLVDLDAAVCLCTALKANVLGVRLNIPLDLSLILNGC
        M+SKATVSL FLLALNL+F SFV + + +KCPID LKLGVCAKLLGGVVD++IGK+SCCPLI  LVDLDAAVCLCTALKANVLG+RLNIP+DLSLILNGC
Subjt:  MSSKATVSLAFLLALNLLFFSFVVSAEGDKCPIDALKLGVCAKLLGGVVDVKIGKSSCCPLIEGLVDLDAAVCLCTALKANVLGVRLNIPLDLSLILNGC

Query:  NREVAKGFKC
        N+++AKGFKC
Subjt:  NREVAKGFKC

XP_008437106.1 PREDICTED: lipid transfer protein EARLI 1-like [Cucumis melo]1.7e-4382.73Show/hide
Query:  MSSKATVSLAFLLALNLLFFSFVVSAEGDKCPIDALKLGVCAKLLGGVVDVKIGKSSCCPLIEGLVDLDAAVCLCTALKANVLGVRLNIPLDLSLILNGC
        M+SKATVSLAFLLALNL+F SFV + +  KCP D LKLGVCAKLLGGVVDV+IGK+SCCPLI+GL DLDAAVCLCTALKANVLGVRLNIP+DLSLILNGC
Subjt:  MSSKATVSLAFLLALNLLFFSFVVSAEGDKCPIDALKLGVCAKLLGGVVDVKIGKSSCCPLIEGLVDLDAAVCLCTALKANVLGVRLNIPLDLSLILNGC

Query:  NREVAKGFKC
        N+++AKGFKC
Subjt:  NREVAKGFKC

XP_038876021.1 pEARLI1-like lipid transfer protein 1 [Benincasa hispida]7.6e-4482.73Show/hide
Query:  MSSKATVSLAFLLALNLLFFSFVVSAEGDKCPIDALKLGVCAKLLGGVVDVKIGKSSCCPLIEGLVDLDAAVCLCTALKANVLGVRLNIPLDLSLILNGC
        M+SKATVSL+FLLALNLLFFSF+ +    KCPIDALKLGVCAKLLGGVVDV+IGK+SCCPLI+GL DLDAAVCLCT+L+ANVLGVRLNIP+DLSLILNGC
Subjt:  MSSKATVSLAFLLALNLLFFSFVVSAEGDKCPIDALKLGVCAKLLGGVVDVKIGKSSCCPLIEGLVDLDAAVCLCTALKANVLGVRLNIPLDLSLILNGC

Query:  NREVAKGFKC
        NR +AKGF+C
Subjt:  NREVAKGFKC

XP_038876023.1 pEARLI1-like lipid transfer protein 1 [Benincasa hispida]7.6e-4482.73Show/hide
Query:  MSSKATVSLAFLLALNLLFFSFVVSAEGDKCPIDALKLGVCAKLLGGVVDVKIGKSSCCPLIEGLVDLDAAVCLCTALKANVLGVRLNIPLDLSLILNGC
        M+SKATVSL++LLALNLLFFSFV + +  KCPIDALKLGVCAKLLGGVVDV+IGK+SCCPLI+GL DLDAAVCLCT+L+ANVLGVRLNIP+DLSLILNGC
Subjt:  MSSKATVSLAFLLALNLLFFSFVVSAEGDKCPIDALKLGVCAKLLGGVVDVKIGKSSCCPLIEGLVDLDAAVCLCTALKANVLGVRLNIPLDLSLILNGC

Query:  NREVAKGFKC
        NR +AKGF+C
Subjt:  NREVAKGFKC

TrEMBL top hitse value%identityAlignment
A0A1S3ATC3 lipid transfer protein EARLI 1-like8.2e-4482.73Show/hide
Query:  MSSKATVSLAFLLALNLLFFSFVVSAEGDKCPIDALKLGVCAKLLGGVVDVKIGKSSCCPLIEGLVDLDAAVCLCTALKANVLGVRLNIPLDLSLILNGC
        M+SKATVSLAFLLALNL+F SFV + +  KCP D LKLGVCAKLLGGVVDV+IGK+SCCPLI+GL DLDAAVCLCTALKANVLGVRLNIP+DLSLILNGC
Subjt:  MSSKATVSLAFLLALNLLFFSFVVSAEGDKCPIDALKLGVCAKLLGGVVDVKIGKSSCCPLIEGLVDLDAAVCLCTALKANVLGVRLNIPLDLSLILNGC

Query:  NREVAKGFKC
        N+++AKGFKC
Subjt:  NREVAKGFKC

A0A1S3ATR8 pEARLI1-like lipid transfer protein 12.6e-4280Show/hide
Query:  MSSKATVSLAFLLALNLLFFSFVVSAEGDKCPIDALKLGVCAKLLGGVVDVKIGKSSCCPLIEGLVDLDAAVCLCTALKANVLGVRLNIPLDLSLILNGC
        M+SKATVSLAFLLALNL+F SFV + + +KCPID LKLGVCAKLLGGVV V+IGK+SCCPLI+G+ DLDAAVCLCTALKANVLGVRLNIP+DLSLILNGC
Subjt:  MSSKATVSLAFLLALNLLFFSFVVSAEGDKCPIDALKLGVCAKLLGGVVDVKIGKSSCCPLIEGLVDLDAAVCLCTALKANVLGVRLNIPLDLSLILNGC

Query:  NREVAKGFKC
        N+++  GFKC
Subjt:  NREVAKGFKC

A0A1S3ATT0 lipid transfer protein EARLI 1-like2.6e-4280Show/hide
Query:  MSSKATVSLAFLLALNLLFFSFVVSAEGDKCPIDALKLGVCAKLLGGVVDVKIGKSSCCPLIEGLVDLDAAVCLCTALKANVLGVRLNIPLDLSLILNGC
        M+SKATVSLAFLLALNL+F SFV + +  KCPID LKLGVCAKLLGGVV V+IGK+SCCPLI+G+ DLDAAVCLCTALKANVLGVRLNIP+DLSLILNGC
Subjt:  MSSKATVSLAFLLALNLLFFSFVVSAEGDKCPIDALKLGVCAKLLGGVVDVKIGKSSCCPLIEGLVDLDAAVCLCTALKANVLGVRLNIPLDLSLILNGC

Query:  NREVAKGFKC
        N+++ +GFKC
Subjt:  NREVAKGFKC

A0A5A7T8X5 Lipid transfer protein EARLI 1-like7.0e-4380.91Show/hide
Query:  MSSKATVSLAFLLALNLLFFSFVVSAEGDKCPIDALKLGVCAKLLGGVVDVKIGKSSCCPLIEGLVDLDAAVCLCTALKANVLGVRLNIPLDLSLILNGC
        M+SKATVSL FLLALNL+F SFV + + +KCPID LKLGVCAKLLGGVVD++IGK+SCCPLI  LVDLDAAVCLCTALKANVLG+RLNIP+DLSLILNGC
Subjt:  MSSKATVSLAFLLALNLLFFSFVVSAEGDKCPIDALKLGVCAKLLGGVVDVKIGKSSCCPLIEGLVDLDAAVCLCTALKANVLGVRLNIPLDLSLILNGC

Query:  NREVAKGFKC
        N+++AKGFKC
Subjt:  NREVAKGFKC

A0A5A7TEN5 PEARLI1-like lipid transfer protein 11.1e-4384.55Show/hide
Query:  MSSKATVSLAFLLALNLLFFSFVVSAEGDKCPIDALKLGVCAKLLGGVVDVKIGKSSCCPLIEGLVDLDAAVCLCTALKANVLGVRLNIPLDLSLILNGC
        M+SKA  SL FLLALNLLFFSFV +   +KCPID LKLGVCAKLLGGVVDV+IGK+SCCPLI  LVDLDAAVCLCTALKANVLGVRLNIPLDLSLILNGC
Subjt:  MSSKATVSLAFLLALNLLFFSFVVSAEGDKCPIDALKLGVCAKLLGGVVDVKIGKSSCCPLIEGLVDLDAAVCLCTALKANVLGVRLNIPLDLSLILNGC

Query:  NREVAKGFKC
        NR++AKGFKC
Subjt:  NREVAKGFKC

SwissProt top hitse value%identityAlignment
P14009 14 kDa proline-rich protein DC2.151.4e-2447.06Show/hide
Query:  MSSKATVSLAFLLALNLLFFSFVVSAE-----------------------GDKCPIDALKLGVCAKLLGGVVDVKIGKS---SCCPLIEGLVDLDAAVCL
        M SK + S+A    LN+LFF+ V S E                         KCP DALKLGVCA +L  V +V IG      CC L+EGLV+L+AAVCL
Subjt:  MSSKATVSLAFLLALNLLFFSFVVSAE-----------------------GDKCPIDALKLGVCAKLLGGVVDVKIGKS---SCCPLIEGLVDLDAAVCL

Query:  CTALKANVLGVRLNIPLDLSLILNGCNREVAKGFKC
        CTA+KAN+LG  LN+P+ LSL+LN C ++V  GF+C
Subjt:  CTALKANVLGVRLNIPLDLSLILNGCNREVAKGFKC

Q39176 Lipid transfer protein EARLI 13.7e-2561.45Show/hide
Query:  CPIDALKLGVCAKLLGGVVDVKIGKSS---CCPLIEGLVDLDAAVCLCTALKANVLGVRLNIPLDLSLILNGCNREVAKGFKC
        CPIDAL+LGVCA +L  ++++++G+ S   CC LI+GLVDLDAA+CLCTAL+ANVLG+ LN+P+ LS++LN CNR+V  GF+C
Subjt:  CPIDALKLGVCAKLLGGVVDVKIGKSS---CCPLIEGLVDLDAAVCLCTALKANVLGVRLNIPLDLSLILNGCNREVAKGFKC

Q9SU33 pEARLI1-like lipid transfer protein 31.1e-2461.45Show/hide
Query:  CPIDALKLGVCAKLLGGVVDVKIGKSS---CCPLIEGLVDLDAAVCLCTALKANVLGVRLNIPLDLSLILNGCNREVAKGFKC
        CPIDAL+LGVCA +L G+++V++G+ S   CC LI+GLVDLDAA+CLCTAL+ANVLG+ LN+P+ LS++LN CNR +   F+C
Subjt:  CPIDALKLGVCAKLLGGVVDVKIGKSS---CCPLIEGLVDLDAAVCLCTALKANVLGVRLNIPLDLSLILNGCNREVAKGFKC

Q9SU34 pEARLI1-like lipid transfer protein 26.3e-2562.65Show/hide
Query:  CPIDALKLGVCAKLLGGVVDVKIGKSS---CCPLIEGLVDLDAAVCLCTALKANVLGVRLNIPLDLSLILNGCNREVAKGFKC
        CPIDAL+LGVCA +L G+++V++G+ S   CC LI+GLVDLDAAVCLCTAL+ANVLG+ LN+P+ LS++LN CNR +   F+C
Subjt:  CPIDALKLGVCAKLLGGVVDVKIGKSS---CCPLIEGLVDLDAAVCLCTALKANVLGVRLNIPLDLSLILNGCNREVAKGFKC

Q9SU35 pEARLI1-like lipid transfer protein 17.5e-2640Show/hide
Query:  MSSKATVSLAFLLALNLLFFSFVVS-----------------------------------------------AEGDKCPIDALKLGVCAKLLGGVVDVKI
        M+SK + SLA   ALN+LFF+  V+                                               + G+ CPIDALKLGVCA +L  ++++++
Subjt:  MSSKATVSLAFLLALNLLFFSFVVS-----------------------------------------------AEGDKCPIDALKLGVCAKLLGGVVDVKI

Query:  GKSS---CCPLIEGLVDLDAAVCLCTALKANVLGVRLNIPLDLSLILNGCNREVAKGFKC
        G+ S   CC LI+GLVD+DAA+CLCTAL+ANVLG+ LN+P+ LS++LN CNR++  GF+C
Subjt:  GKSS---CCPLIEGLVDLDAAVCLCTALKANVLGVRLNIPLDLSLILNGCNREVAKGFKC

Arabidopsis top hitse value%identityAlignment
AT1G12090.1 extensin-like protein4.5e-2644.85Show/hide
Query:  ATVSLAFLLALNLLFFSFV---------------------------VSAEGDKCPIDALKLGVCAKLLGGVVDVKIGK---SSCCPLIEGLVDLDAAVCL
        A+ S+A  LALNLLFF+ +                            S+   KCP D LKLGVCA +L G++D+ +GK     CC LI+GL D++AAVCL
Subjt:  ATVSLAFLLALNLLFFSFV---------------------------VSAEGDKCPIDALKLGVCAKLLGGVVDVKIGK---SSCCPLIEGLVDLDAAVCL

Query:  CTALKANVLGVRLNIPLDLSLILNGCNREVAKGFKC
        CTALKAN+LG+ LN+P+ LSL+LN C++++  GF+C
Subjt:  CTALKANVLGVRLNIPLDLSLILNGCNREVAKGFKC

AT1G62510.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein1.2e-2645.33Show/hide
Query:  MSSKATVSLAFLLALNLLFFSFVVSAEGD-------------------------------------KCPIDALKLGVCAKLLGGVVDVKIGK---SSCCP
        M+S+ T SLA  L LN LFF+  +SA G+                                     KCP DALKLGVCA +L G+++V +GK     CC 
Subjt:  MSSKATVSLAFLLALNLLFFSFVVSAEGD-------------------------------------KCPIDALKLGVCAKLLGGVVDVKIGK---SSCCP

Query:  LIEGLVDLDAAVCLCTALKANVLGVRLNIPLDLSLILNGCNREVAKGFKC
        LI+GL DL+AA CLCTALKAN+LG+ LNIPL LSL+LN C+++V +GF+C
Subjt:  LIEGLVDLDAAVCLCTALKANVLGVRLNIPLDLSLILNGCNREVAKGFKC

AT2G45180.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein2.4e-2750Show/hide
Query:  MSSKATVSLAFLLALNLLFFSFVVS---------------------AEGDKCPIDALKLGVCAKLLGGVVDVKIG---KSSCCPLIEGLVDLDAAVCLCT
        M+SKA    A L+ LNLLFF+FV S                     A    CP D LKLGVCA LL G+V+V +G   K+ CC L++GL +L+AAVCLCT
Subjt:  MSSKATVSLAFLLALNLLFFSFVVS---------------------AEGDKCPIDALKLGVCAKLLGGVVDVKIG---KSSCCPLIEGLVDLDAAVCLCT

Query:  ALKANVLGVRLNIPLDLSLILNGCNREVAKGFKC
        ALKANVLG+ LN+P+DL+L+LN C ++V  GF+C
Subjt:  ALKANVLGVRLNIPLDLSLILNGCNREVAKGFKC

AT4G12470.1 azelaic acid induced 15.3e-2740Show/hide
Query:  MSSKATVSLAFLLALNLLFFSFVVS-----------------------------------------------AEGDKCPIDALKLGVCAKLLGGVVDVKI
        M+SK + SLA   ALN+LFF+  V+                                               + G+ CPIDALKLGVCA +L  ++++++
Subjt:  MSSKATVSLAFLLALNLLFFSFVVS-----------------------------------------------AEGDKCPIDALKLGVCAKLLGGVVDVKI

Query:  GKSS---CCPLIEGLVDLDAAVCLCTALKANVLGVRLNIPLDLSLILNGCNREVAKGFKC
        G+ S   CC LI+GLVD+DAA+CLCTAL+ANVLG+ LN+P+ LS++LN CNR++  GF+C
Subjt:  GKSS---CCPLIEGLVDLDAAVCLCTALKANVLGVRLNIPLDLSLILNGCNREVAKGFKC

AT4G12480.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein2.6e-2661.45Show/hide
Query:  CPIDALKLGVCAKLLGGVVDVKIGKSS---CCPLIEGLVDLDAAVCLCTALKANVLGVRLNIPLDLSLILNGCNREVAKGFKC
        CPIDAL+LGVCA +L  ++++++G+ S   CC LI+GLVDLDAA+CLCTAL+ANVLG+ LN+P+ LS++LN CNR+V  GF+C
Subjt:  CPIDALKLGVCAKLLGGVVDVKIGKSS---CCPLIEGLVDLDAAVCLCTALKANVLGVRLNIPLDLSLILNGCNREVAKGFKC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTCCAAAGCTACCGTCTCTCTCGCGTTTCTCCTCGCTCTCAATCTCCTTTTCTTCTCCTTCGTCGTCTCTGCTGAAGGCGACAAGTGCCCAATAGACGCTCTTAA
GCTTGGTGTTTGTGCGAAATTGCTCGGCGGTGTCGTCGATGTTAAGATCGGCAAGTCATCTTGTTGCCCTCTGATCGAAGGGCTTGTTGATCTAGATGCTGCTGTGTGCC
TATGCACTGCTCTTAAAGCCAATGTATTGGGAGTGAGACTCAACATCCCCCTCGACCTCTCCTTGATTCTCAATGGCTGCAATAGAGAAGTTGCAAAGGGCTTCAAGTGC
TGA
mRNA sequenceShow/hide mRNA sequence
ATGAGTTCCAAAGCTACCGTCTCTCTCGCGTTTCTCCTCGCTCTCAATCTCCTTTTCTTCTCCTTCGTCGTCTCTGCTGAAGGCGACAAGTGCCCAATAGACGCTCTTAA
GCTTGGTGTTTGTGCGAAATTGCTCGGCGGTGTCGTCGATGTTAAGATCGGCAAGTCATCTTGTTGCCCTCTGATCGAAGGGCTTGTTGATCTAGATGCTGCTGTGTGCC
TATGCACTGCTCTTAAAGCCAATGTATTGGGAGTGAGACTCAACATCCCCCTCGACCTCTCCTTGATTCTCAATGGCTGCAATAGAGAAGTTGCAAAGGGCTTCAAGTGC
TGA
Protein sequenceShow/hide protein sequence
MSSKATVSLAFLLALNLLFFSFVVSAEGDKCPIDALKLGVCAKLLGGVVDVKIGKSSCCPLIEGLVDLDAAVCLCTALKANVLGVRLNIPLDLSLILNGCNREVAKGFKC