; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi09G004190 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi09G004190
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr09:4454969..4465298
RNA-Seq ExpressionLsi09G004190
SyntenyLsi09G004190
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
GO:0003724 - RNA helicase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001878 - Zinc finger, CCHC-type
IPR007529 - Zinc finger, HIT-type
IPR019339 - CBF1-interacting co-repressor CIR, N-terminal domain
IPR036875 - Zinc finger, CCHC-type superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039710.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein isoform 1 [Cucumis melo var. makuwa]2.2e-15267.67Show/hide
Query:  MGSRTNFYKNPSISYKKDLNLSSALQNLRAYNIATGNAPPTDVQ----PSPVVKKNENRKRHREPELSGSPKYDVGNNDGPMSHQDYIERRRKEANKSQP
        MGSRTNFYKNPSISYKKDLNLSSALQNLRAYNIATGNAPPTDVQ    P PV KKNE RKR REPEL G+ KYDVGN+DGPMSHQDYIERRRKEAN SQP
Subjt:  MGSRTNFYKNPSISYKKDLNLSSALQNLRAYNIATGNAPPTDVQ----PSPVVKKNENRKRHREPELSGSPKYDVGNNDGPMSHQDYIERRRKEANKSQP

Query:  YVTLTEDVLGASSLGLNLVEYE------------------SLLNDYEEVKSKTEQRFAIAGEPVCVVCGRYGEYICNETNDDICSMECKFKLLEILKRSE
        Y TLTEDVL ASS GLNLV+YE                  SLLNDYEEVKSKTEQRFA+AGEPVCVVCGRYGEYIC+ETNDDICS ECKFKLLEILKR E
Subjt:  YVTLTEDVLGASSLGLNLVEYE------------------SLLNDYEEVKSKTEQRFAIAGEPVCVVCGRYGEYICNETNDDICSMECKFKLLEILKRSE

Query:  ESSNCEVKDVALPESKYILPSPEFGEDTWDYKNHRWSKKKSNLCTYECWKCQKPGHLAEDCLLKTSNQVMQQRTSNPVPGDLLGLYK-------------
        E SNCEVKDVALPESKYILPSPE GEDTWDYKNHRWSKKKS+LCTYECWKCQKPGHLAEDCL+KTSNQVMQQ TSNPVPGDLL LYK             
Subjt:  ESSNCEVKDVALPESKYILPSPEFGEDTWDYKNHRWSKKKSNLCTYECWKCQKPGHLAEDCLLKTSNQVMQQRTSNPVPGDLLGLYK-------------

Query:  --------------------------------------------------------RVTHIKDLLVCHYCFDKAFDKFYDMYTAS---------------
                                                                RVT IKDLLVCHYCFDKAF+KFYDMYTAS               
Subjt:  --------------------------------------------------------RVTHIKDLLVCHYCFDKAFDKFYDMYTAS---------------

Query:  -----WHRMNCFNADVEDTAYIINRKAKEE
             WHRMNCFNADVEDTAYIINRK K++
Subjt:  -----WHRMNCFNADVEDTAYIINRKAKEE

KAG7036125.1 putative ATP-dependent RNA helicase DDX59 [Cucurbita argyrosperma subsp. argyrosperma]1.6e-15066.28Show/hide
Query:  MGSRTNFYKNPSISYKKDLNLSSALQNLRAYNIATGNAPPTDVQPSPVVKKNENRKR-HREPELSGSPKYDVGNNDGPMSHQDYIERRRKEANKSQPYVT
        MGSRTNFYKNPSISY KDLNLSSALQNLRAYNIA GNAPPTD QP PV KKNENRKR  REPELSG+PKYDVG++DGPMSHQDYIE+RRKEAN+ QPY T
Subjt:  MGSRTNFYKNPSISYKKDLNLSSALQNLRAYNIATGNAPPTDVQPSPVVKKNENRKR-HREPELSGSPKYDVGNNDGPMSHQDYIERRRKEANKSQPYVT

Query:  LTEDVLGASSLGLNLVEYE------------------SLLNDYEEVKSKTEQRFAIAGEPVCVVCGRYGEYICNETNDDICSMECKFKLLEILKRSEESS
        LTEDVLG SS GLNLV YE                  SLLN++EEV+ KTEQRFAIAGEPVCVVCGRYGEYICNETNDDICSMECKFKLLEILKRSEESS
Subjt:  LTEDVLGASSLGLNLVEYE------------------SLLNDYEEVKSKTEQRFAIAGEPVCVVCGRYGEYICNETNDDICSMECKFKLLEILKRSEESS

Query:  NCEVKDVALPESKYILPSPEFGEDTWDYKNHRWSKKKSNLCTYECWKCQKPGHLAEDCLLKTSNQVMQQRTSNPVPGDLLGLYK----------------
        NCEVKDVALPE+K+ILPSPEFGEDTWDYKNHRWSK KSNLCTYECWKCQKPGHLAEDCL++TSNQVMQQ+T N VP DL+GLYK                
Subjt:  NCEVKDVALPESKYILPSPEFGEDTWDYKNHRWSKKKSNLCTYECWKCQKPGHLAEDCLLKTSNQVMQQRTSNPVPGDLLGLYK----------------

Query:  -----------------------------------------------------RVTHIKDLLVCHYCFDKAFDKFYDMYTAS------------------
                                                             RVT IKDLLVCHYCFDKAFDKFYDMYTAS                  
Subjt:  -----------------------------------------------------RVTHIKDLLVCHYCFDKAFDKFYDMYTAS------------------

Query:  --WHRMNCFNADVEDTAYIINRKAKEE
          WHRMNCFNADVED AYI+NR  K E
Subjt:  --WHRMNCFNADVEDTAYIINRKAKEE

XP_008437097.1 PREDICTED: uncharacterized protein LOC103482617 [Cucumis melo]7.0e-15468.14Show/hide
Query:  MGSRTNFYKNPSISYKKDLNLSSALQNLRAYNIATGNAPPTDVQ----PSPVVKKNENRKRHREPELSGSPKYDVGNNDGPMSHQDYIERRRKEANKSQP
        MGSRTNFYKNPSISYKKDLNLSSALQNLRAYNIATGNAPPTDVQ    P PV KKNE RKR REPEL G+ KYDVGN+DGPMSHQDYIERRRKEAN SQP
Subjt:  MGSRTNFYKNPSISYKKDLNLSSALQNLRAYNIATGNAPPTDVQ----PSPVVKKNENRKRHREPELSGSPKYDVGNNDGPMSHQDYIERRRKEANKSQP

Query:  YVTLTEDVLGASSLGLNLVEYE------------------SLLNDYEEVKSKTEQRFAIAGEPVCVVCGRYGEYICNETNDDICSMECKFKLLEILKRSE
        Y TLTEDVL ASS GLNLV+YE                  SLLNDYEEVKSKTEQRFA+AGEPVCVVCGRYGEYIC+ETNDDICS ECKFKLLEILKR E
Subjt:  YVTLTEDVLGASSLGLNLVEYE------------------SLLNDYEEVKSKTEQRFAIAGEPVCVVCGRYGEYICNETNDDICSMECKFKLLEILKRSE

Query:  ESSNCEVKDVALPESKYILPSPEFGEDTWDYKNHRWSKKKSNLCTYECWKCQKPGHLAEDCLLKTSNQVMQQRTSNPVPGDLLGLYK-------------
        E SNCEVKDVALPESKYILPSPE GEDTWDYKNHRWSKKKS+LCTYECWKCQKPGHLAEDCL+KTSNQVMQQ TSNPVPGDLLGLYK             
Subjt:  ESSNCEVKDVALPESKYILPSPEFGEDTWDYKNHRWSKKKSNLCTYECWKCQKPGHLAEDCLLKTSNQVMQQRTSNPVPGDLLGLYK-------------

Query:  --------------------------------------------------------RVTHIKDLLVCHYCFDKAFDKFYDMYTAS---------------
                                                                RVT IKDLLVCHYCFDKAFDKFYDMYTAS               
Subjt:  --------------------------------------------------------RVTHIKDLLVCHYCFDKAFDKFYDMYTAS---------------

Query:  -----WHRMNCFNADVEDTAYIINRKAKEE
             WHRMNCFNADVEDTAYIINRK K++
Subjt:  -----WHRMNCFNADVEDTAYIINRKAKEE

XP_011654799.1 uncharacterized protein LOC101212105 [Cucumis sativus]1.4e-15468.14Show/hide
Query:  MGSRTNFYKNPSISYKKDLNLSSALQNLRAYNIATGNAPPTDVQ----PSPVVKKNENRKRHREPELSGSPKYDVGNNDGPMSHQDYIERRRKEANKSQP
        MGSRTNFYKNPSISYKKDL+LSSALQNLRAYNIATGNAPPTDVQ    P PVVKKNENRKR REPEL G+  YDVGN+DGPMSHQDYIERRRKEANKSQP
Subjt:  MGSRTNFYKNPSISYKKDLNLSSALQNLRAYNIATGNAPPTDVQ----PSPVVKKNENRKRHREPELSGSPKYDVGNNDGPMSHQDYIERRRKEANKSQP

Query:  YVTLTEDVLGASSLGLNLVEYE------------------SLLNDYEEVKSKTEQRFAIAGEPVCVVCGRYGEYICNETNDDICSMECKFKLLEILKRSE
        Y TLTEDVL ASS GLNLV+YE                  SLLNDY+EV+SKTEQRFA+AGEPVCVVCGRYGEYIC+ETNDDICSMECKFKLLEILKR E
Subjt:  YVTLTEDVLGASSLGLNLVEYE------------------SLLNDYEEVKSKTEQRFAIAGEPVCVVCGRYGEYICNETNDDICSMECKFKLLEILKRSE

Query:  ESSNCEVKDVALPESKYILPSPEFGEDTWDYKNHRWSKKKSNLCTYECWKCQKPGHLAEDCLLKTSNQVMQQRTSNPVPGDLLGLYK-------------
        E  NCEVKDVALPESKYILPSPEFGEDTWDYKNHRWSKKKSNLCTYECWKCQKPGHLAEDCL+KTSNQ MQQ TSNPVPGDLLGLYK             
Subjt:  ESSNCEVKDVALPESKYILPSPEFGEDTWDYKNHRWSKKKSNLCTYECWKCQKPGHLAEDCLLKTSNQVMQQRTSNPVPGDLLGLYK-------------

Query:  --------------------------------------------------------RVTHIKDLLVCHYCFDKAFDKFYDMYTAS---------------
                                                                RVT IKDLLVCHYCFDKAFDKFYDMYTAS               
Subjt:  --------------------------------------------------------RVTHIKDLLVCHYCFDKAFDKFYDMYTAS---------------

Query:  -----WHRMNCFNADVEDTAYIINRKAKEE
             WHRMNCFNADVEDTAYIINRK K++
Subjt:  -----WHRMNCFNADVEDTAYIINRKAKEE

XP_038874506.1 uncharacterized protein LOC120067139 [Benincasa hispida]1.0e-15769.01Show/hide
Query:  MGSRTNFYKNPSISYKKDLNLSSALQNLRAYNIATGNAPPTDVQPSPVVKKNENRKRHREPELSGSPKYDVGNNDGPMSHQDYIERRRKEANKSQPYVTL
        MGSRTNFYKN SISYKKDLNLSSALQNLRAYNIATGNAPPTDV P PVVKKNENRKRHREPELSGSPKYDVGN+DGPMSHQDYIERRRKEANKSQPY TL
Subjt:  MGSRTNFYKNPSISYKKDLNLSSALQNLRAYNIATGNAPPTDVQPSPVVKKNENRKRHREPELSGSPKYDVGNNDGPMSHQDYIERRRKEANKSQPYVTL

Query:  TEDVLGASSLGLNLVEYE------------------SLLNDYEEVKSKTEQRFAIAGEPVCVVCGRYGEYICNETNDDICSMECKFKLLEILKRSEESSN
        TEDVLG SSLGLNLVEYE                  SLLNDYE+VKSKTEQR AIAGEPVCVVCGRYGEYIC+ETNDDIC MECK KLLEILK SEESSN
Subjt:  TEDVLGASSLGLNLVEYE------------------SLLNDYEEVKSKTEQRFAIAGEPVCVVCGRYGEYICNETNDDICSMECKFKLLEILKRSEESSN

Query:  CEVKDVALPESKYILPSPEFGEDTWDYKNHRWSKKKSNLCTYECWKCQKPGHLAEDCLLKTSNQVMQQRTSNPVPGDLLGLYK-----------------
        C+VKDVALPESKYILPSPEFGEDTWDYKNH WSKKKSNLCTYECWKCQKPGHLAEDCL+K S+Q+++Q TSNPVPGDLLGLYK                 
Subjt:  CEVKDVALPESKYILPSPEFGEDTWDYKNHRWSKKKSNLCTYECWKCQKPGHLAEDCLLKTSNQVMQQRTSNPVPGDLLGLYK-----------------

Query:  ----------------------------------------------------RVTHIKDLLVCHYCFDKAFDKFYDMYTAS-------------------
                                                            RVTHIKDLLVCHYCFDKAFDKFYDMYTAS                   
Subjt:  ----------------------------------------------------RVTHIKDLLVCHYCFDKAFDKFYDMYTAS-------------------

Query:  -WHRMNCFNADVEDTAYIINRKAKEE
         WHRMNCFNADVEDTAYI++RKAK++
Subjt:  -WHRMNCFNADVEDTAYIINRKAKEE

TrEMBL top hitse value%identityAlignment
A0A0A0KP93 CCHC-type domain-containing protein6.8e-15568.14Show/hide
Query:  MGSRTNFYKNPSISYKKDLNLSSALQNLRAYNIATGNAPPTDVQ----PSPVVKKNENRKRHREPELSGSPKYDVGNNDGPMSHQDYIERRRKEANKSQP
        MGSRTNFYKNPSISYKKDL+LSSALQNLRAYNIATGNAPPTDVQ    P PVVKKNENRKR REPEL G+  YDVGN+DGPMSHQDYIERRRKEANKSQP
Subjt:  MGSRTNFYKNPSISYKKDLNLSSALQNLRAYNIATGNAPPTDVQ----PSPVVKKNENRKRHREPELSGSPKYDVGNNDGPMSHQDYIERRRKEANKSQP

Query:  YVTLTEDVLGASSLGLNLVEYE------------------SLLNDYEEVKSKTEQRFAIAGEPVCVVCGRYGEYICNETNDDICSMECKFKLLEILKRSE
        Y TLTEDVL ASS GLNLV+YE                  SLLNDY+EV+SKTEQRFA+AGEPVCVVCGRYGEYIC+ETNDDICSMECKFKLLEILKR E
Subjt:  YVTLTEDVLGASSLGLNLVEYE------------------SLLNDYEEVKSKTEQRFAIAGEPVCVVCGRYGEYICNETNDDICSMECKFKLLEILKRSE

Query:  ESSNCEVKDVALPESKYILPSPEFGEDTWDYKNHRWSKKKSNLCTYECWKCQKPGHLAEDCLLKTSNQVMQQRTSNPVPGDLLGLYK-------------
        E  NCEVKDVALPESKYILPSPEFGEDTWDYKNHRWSKKKSNLCTYECWKCQKPGHLAEDCL+KTSNQ MQQ TSNPVPGDLLGLYK             
Subjt:  ESSNCEVKDVALPESKYILPSPEFGEDTWDYKNHRWSKKKSNLCTYECWKCQKPGHLAEDCLLKTSNQVMQQRTSNPVPGDLLGLYK-------------

Query:  --------------------------------------------------------RVTHIKDLLVCHYCFDKAFDKFYDMYTAS---------------
                                                                RVT IKDLLVCHYCFDKAFDKFYDMYTAS               
Subjt:  --------------------------------------------------------RVTHIKDLLVCHYCFDKAFDKFYDMYTAS---------------

Query:  -----WHRMNCFNADVEDTAYIINRKAKEE
             WHRMNCFNADVEDTAYIINRK K++
Subjt:  -----WHRMNCFNADVEDTAYIINRKAKEE

A0A1S3ATQ8 uncharacterized protein LOC1034826173.4e-15468.14Show/hide
Query:  MGSRTNFYKNPSISYKKDLNLSSALQNLRAYNIATGNAPPTDVQ----PSPVVKKNENRKRHREPELSGSPKYDVGNNDGPMSHQDYIERRRKEANKSQP
        MGSRTNFYKNPSISYKKDLNLSSALQNLRAYNIATGNAPPTDVQ    P PV KKNE RKR REPEL G+ KYDVGN+DGPMSHQDYIERRRKEAN SQP
Subjt:  MGSRTNFYKNPSISYKKDLNLSSALQNLRAYNIATGNAPPTDVQ----PSPVVKKNENRKRHREPELSGSPKYDVGNNDGPMSHQDYIERRRKEANKSQP

Query:  YVTLTEDVLGASSLGLNLVEYE------------------SLLNDYEEVKSKTEQRFAIAGEPVCVVCGRYGEYICNETNDDICSMECKFKLLEILKRSE
        Y TLTEDVL ASS GLNLV+YE                  SLLNDYEEVKSKTEQRFA+AGEPVCVVCGRYGEYIC+ETNDDICS ECKFKLLEILKR E
Subjt:  YVTLTEDVLGASSLGLNLVEYE------------------SLLNDYEEVKSKTEQRFAIAGEPVCVVCGRYGEYICNETNDDICSMECKFKLLEILKRSE

Query:  ESSNCEVKDVALPESKYILPSPEFGEDTWDYKNHRWSKKKSNLCTYECWKCQKPGHLAEDCLLKTSNQVMQQRTSNPVPGDLLGLYK-------------
        E SNCEVKDVALPESKYILPSPE GEDTWDYKNHRWSKKKS+LCTYECWKCQKPGHLAEDCL+KTSNQVMQQ TSNPVPGDLLGLYK             
Subjt:  ESSNCEVKDVALPESKYILPSPEFGEDTWDYKNHRWSKKKSNLCTYECWKCQKPGHLAEDCLLKTSNQVMQQRTSNPVPGDLLGLYK-------------

Query:  --------------------------------------------------------RVTHIKDLLVCHYCFDKAFDKFYDMYTAS---------------
                                                                RVT IKDLLVCHYCFDKAFDKFYDMYTAS               
Subjt:  --------------------------------------------------------RVTHIKDLLVCHYCFDKAFDKFYDMYTAS---------------

Query:  -----WHRMNCFNADVEDTAYIINRKAKEE
             WHRMNCFNADVEDTAYIINRK K++
Subjt:  -----WHRMNCFNADVEDTAYIINRKAKEE

A0A5A7T8Y4 P-loop containing nucleoside triphosphate hydrolases superfamily protein isoform 11.1e-15267.67Show/hide
Query:  MGSRTNFYKNPSISYKKDLNLSSALQNLRAYNIATGNAPPTDVQ----PSPVVKKNENRKRHREPELSGSPKYDVGNNDGPMSHQDYIERRRKEANKSQP
        MGSRTNFYKNPSISYKKDLNLSSALQNLRAYNIATGNAPPTDVQ    P PV KKNE RKR REPEL G+ KYDVGN+DGPMSHQDYIERRRKEAN SQP
Subjt:  MGSRTNFYKNPSISYKKDLNLSSALQNLRAYNIATGNAPPTDVQ----PSPVVKKNENRKRHREPELSGSPKYDVGNNDGPMSHQDYIERRRKEANKSQP

Query:  YVTLTEDVLGASSLGLNLVEYE------------------SLLNDYEEVKSKTEQRFAIAGEPVCVVCGRYGEYICNETNDDICSMECKFKLLEILKRSE
        Y TLTEDVL ASS GLNLV+YE                  SLLNDYEEVKSKTEQRFA+AGEPVCVVCGRYGEYIC+ETNDDICS ECKFKLLEILKR E
Subjt:  YVTLTEDVLGASSLGLNLVEYE------------------SLLNDYEEVKSKTEQRFAIAGEPVCVVCGRYGEYICNETNDDICSMECKFKLLEILKRSE

Query:  ESSNCEVKDVALPESKYILPSPEFGEDTWDYKNHRWSKKKSNLCTYECWKCQKPGHLAEDCLLKTSNQVMQQRTSNPVPGDLLGLYK-------------
        E SNCEVKDVALPESKYILPSPE GEDTWDYKNHRWSKKKS+LCTYECWKCQKPGHLAEDCL+KTSNQVMQQ TSNPVPGDLL LYK             
Subjt:  ESSNCEVKDVALPESKYILPSPEFGEDTWDYKNHRWSKKKSNLCTYECWKCQKPGHLAEDCLLKTSNQVMQQRTSNPVPGDLLGLYK-------------

Query:  --------------------------------------------------------RVTHIKDLLVCHYCFDKAFDKFYDMYTAS---------------
                                                                RVT IKDLLVCHYCFDKAF+KFYDMYTAS               
Subjt:  --------------------------------------------------------RVTHIKDLLVCHYCFDKAFDKFYDMYTAS---------------

Query:  -----WHRMNCFNADVEDTAYIINRKAKEE
             WHRMNCFNADVEDTAYIINRK K++
Subjt:  -----WHRMNCFNADVEDTAYIINRKAKEE

A0A6J1H0R9 uncharacterized protein LOC111459101 isoform X11.3e-15065.81Show/hide
Query:  MGSRTNFYKNPSISYKKDLNLSSALQNLRAYNIATGNAPPTDVQPSPVVKKNENRKR-HREPELSGSPKYDVGNNDGPMSHQDYIERRRKEANKSQPYVT
        MGSRTNFYKNPSISYKKDLNLSSALQNLRAYNIA GNAPPTD +P PV KKNENRKR  REPELSG+PKYDVG++DGPMSHQDYIE+RRKEAN+ QPY  
Subjt:  MGSRTNFYKNPSISYKKDLNLSSALQNLRAYNIATGNAPPTDVQPSPVVKKNENRKR-HREPELSGSPKYDVGNNDGPMSHQDYIERRRKEANKSQPYVT

Query:  LTEDVLGASSLGLNLVEYE------------------SLLNDYEEVKSKTEQRFAIAGEPVCVVCGRYGEYICNETNDDICSMECKFKLLEILKRSEESS
        LTEDVLG SS GLNLV YE                  SLLN++EEV+ KTEQRFA AGEPVCVVCGRYGEYICNETNDDICSMECKFKLLEILKRSEESS
Subjt:  LTEDVLGASSLGLNLVEYE------------------SLLNDYEEVKSKTEQRFAIAGEPVCVVCGRYGEYICNETNDDICSMECKFKLLEILKRSEESS

Query:  NCEVKDVALPESKYILPSPEFGEDTWDYKNHRWSKKKSNLCTYECWKCQKPGHLAEDCLLKTSNQVMQQRTSNPVPGDLLGLYK----------------
        NCEVKDVALPE+KYILPSPEFGEDTWDYKNHRWSK KSNLCTYECWKCQKPGHLAEDCL+++SNQVMQQ++ NPVP DL+GLYK                
Subjt:  NCEVKDVALPESKYILPSPEFGEDTWDYKNHRWSKKKSNLCTYECWKCQKPGHLAEDCLLKTSNQVMQQRTSNPVPGDLLGLYK----------------

Query:  -----------------------------------------------------RVTHIKDLLVCHYCFDKAFDKFYDMYTAS------------------
                                                             RVT+IKDLLVCHYCFDKAFDKFYDMYTAS                  
Subjt:  -----------------------------------------------------RVTHIKDLLVCHYCFDKAFDKFYDMYTAS------------------

Query:  --WHRMNCFNADVEDTAYIINRKAKEE
          WHRMNCFNADVED AYI+NR  K E
Subjt:  --WHRMNCFNADVEDTAYIINRKAKEE

A0A6J1K849 uncharacterized protein LOC111491515 isoform X11.3e-15066.59Show/hide
Query:  MGSRTNFYKNPSISYKKDLNLSSALQNLRAYNIATGNAPPTDVQPSPVVKKNENRKR-HREPELSGSPKYDVGNNDGPMSHQDYIERRRKEANKSQPYVT
        MGSRTNFYKNPSISYKKDLNLSSALQNLRAYNIA GNAPPTD QPSPV KKNENRKR  RE ELSG+PKYDVG++DGPMSHQDYIE+RRKEAN+ QPY T
Subjt:  MGSRTNFYKNPSISYKKDLNLSSALQNLRAYNIATGNAPPTDVQPSPVVKKNENRKR-HREPELSGSPKYDVGNNDGPMSHQDYIERRRKEANKSQPYVT

Query:  LTEDVLGASSLGLNLVEYE------------------SLLNDYEEVKSKTEQRFAIAGEPVCVVCGRYGEYICNETNDDICSMECKFKLLEILKRSEESS
        L+EDVLG SS GLNLV YE                  SLLN++EEV+ KTEQRFAIAGEPVCVVCGRYGEYICNETNDDICSMECKFKLLEILKRSEESS
Subjt:  LTEDVLGASSLGLNLVEYE------------------SLLNDYEEVKSKTEQRFAIAGEPVCVVCGRYGEYICNETNDDICSMECKFKLLEILKRSEESS

Query:  NCEVKDVALPESKYILPSPEFGEDTWDYKNHRWSKKKSNLCTYECWKCQKPGHLAEDCLLKTSNQVMQQRTSNPVPGDLLGLYK----------------
        NCEVKDVALPE+KYILPSPEFGEDTWDYKNHRWSK KSNLCTYECWKCQKPGHLAEDCL++TSNQVMQQ+T N VP DL+GLYK                
Subjt:  NCEVKDVALPESKYILPSPEFGEDTWDYKNHRWSKKKSNLCTYECWKCQKPGHLAEDCLLKTSNQVMQQRTSNPVPGDLLGLYK----------------

Query:  -----------------------------------------------------RVTHIKDLLVCHYCFDKAFDKFYDMYTAS------------------
                                                             RVT IKDLLVCHYCFDKAFDKFYDMYTAS                  
Subjt:  -----------------------------------------------------RVTHIKDLLVCHYCFDKAFDKFYDMYTAS------------------

Query:  --WHRMNCFNADVEDTAYIINRKAK
          WHRMNCFNADVED AYI+NR  K
Subjt:  --WHRMNCFNADVEDTAYIINRKAK

SwissProt top hitse value%identityAlignment
Q0E2Z7 DEAD-box ATP-dependent RNA helicase 411.1e-1152.05Show/hide
Query:  NDYEEVKSKT---EQRFAIAGEPVCVVCGRYGEYICNETNDDICSMECKFKLLEILKRSEESSNCEVKDVALP
        N+ EE   K    EQR A+ GEP CV+CGRYGEYIC++T+DDICS+ECK  LL  L           K V LP
Subjt:  NDYEEVKSKT---EQRFAIAGEPVCVVCGRYGEYICNETNDDICSMECKFKLLEILKRSEESSNCEVKDVALP

Q3EBD3 DEAD-box ATP-dependent RNA helicase 416.8e-1165.22Show/hide
Query:  VKSKT-EQRFAIAGEPVCVVCGRYGEYICNETNDDICSMECKFKLL
        VK K+ +QR  ++GEP CV+C RYGEYIC+ETNDD+CS+ECK  LL
Subjt:  VKSKT-EQRFAIAGEPVCVVCGRYGEYICNETNDDICSMECKFKLL

Q5T1V6 Probable ATP-dependent RNA helicase DDX592.8e-1260.34Show/hide
Query:  EEVKSKTE-QRFAIAGEPVCVVCGRYGEYICNETNDDICSMECKFKLLEILKRSEESS
        E VKS ++ QR+A  GEP+CVVCGRYGEYIC++T++D+CS+ECK K L  +K  EE S
Subjt:  EEVKSKTE-QRFAIAGEPVCVVCGRYGEYICNETNDDICSMECKFKLLEILKRSEESS

Q66HG7 Probable ATP-dependent RNA helicase DDX595.2e-1159.65Show/hide
Query:  EEVKSKTE-QRFAIAGEPVCVVCGRYGEYICNETNDDICSMECKFKLLEILKRSEES
        E VKS ++ QR+   GEPVCVVCGRYGEYIC++T++D+CS+ECK K L  +K  E S
Subjt:  EEVKSKTE-QRFAIAGEPVCVVCGRYGEYICNETNDDICSMECKFKLLEILKRSEES

Q9DBN9 Probable ATP-dependent RNA helicase DDX595.2e-1159.65Show/hide
Query:  EEVKSKTE-QRFAIAGEPVCVVCGRYGEYICNETNDDICSMECKFKLLEILKRSEES
        E VKS ++ QR+   GEPVCVVCGRYGEYIC++T++D+CS+ECK K L  +K  E S
Subjt:  EEVKSKTE-QRFAIAGEPVCVVCGRYGEYICNETNDDICSMECKFKLLEILKRSEES

Arabidopsis top hitse value%identityAlignment
AT2G03010.1 Family of unknown function (DUF577)2.8e-0744.23Show/hide
Query:  VRRDEEAAAKEEQLKREQARKRDAEFRLEQLRTARGLAPVIDTAKPVETDLKPGHINLFEGIKIFDPVKGSEN----GGVEDGSKK-------KRMKKEE
        VR+DEEAAA+EEQ+KRE ARKRDAE RLE LR  RGLAP+    + V       +          D V+G  +    GG E   KK       K +K+E 
Subjt:  VRRDEEAAAKEEQLKREQARKRDAEFRLEQLRTARGLAPVIDTAKPVETDLKPGHINLFEGIKIFDPVKGSEN----GGVEDGSKK-------KRMKKEE

Query:  VEKK
        VEK+
Subjt:  VEKK

AT3G02065.2 P-loop containing nucleoside triphosphate hydrolases superfamily protein4.9e-1265.22Show/hide
Query:  VKSKT-EQRFAIAGEPVCVVCGRYGEYICNETNDDICSMECKFKLL
        VK K+ +QR  ++GEP CV+C RYGEYIC+ETNDD+CS+ECK  LL
Subjt:  VKSKT-EQRFAIAGEPVCVVCGRYGEYICNETNDDICSMECKFKLL

AT3G02065.3 P-loop containing nucleoside triphosphate hydrolases superfamily protein4.9e-1265.22Show/hide
Query:  VKSKT-EQRFAIAGEPVCVVCGRYGEYICNETNDDICSMECKFKLL
        VK K+ +QR  ++GEP CV+C RYGEYIC+ETNDD+CS+ECK  LL
Subjt:  VKSKT-EQRFAIAGEPVCVVCGRYGEYICNETNDDICSMECKFKLL

AT4G16530.1 Family of unknown function (DUF577)2.5e-4849.41Show/hide
Query:  LDLVIMGGHGGLNILPQKRWNVYNYENREKVRRDEEAAAKEEQLKREQARKRDAEFRLEQLRTARGLAP---------------------VIDTAKPVET
        L+   MGGHGGLNILPQKRWNVYN++NREKVR++EEAAA+EEQ+KRE+ARKRDAE RLE LR  RGLAP                     V  TA  VE+
Subjt:  LDLVIMGGHGGLNILPQKRWNVYNYENREKVRRDEEAAAKEEQLKREQARKRDAEFRLEQLRTARGLAP---------------------VIDTAKPVET

Query:  ----DLKPGHINLFEGIKIFDP--VKGSENGGVEDGSKKKRMKKE----------EVEKKVITPEDEKYKLGYGVAGKGVKLPWYLERPG--KDDAESDE
            + K GHINLFEGI+IFDP  +K ++    E+  ++K+M+KE          +   +   P++EKY+LGYGVAGKGVK PWYLE+     D    ++
Subjt:  ----DLKPGHINLFEGIKIFDP--VKGSENGGVEDGSKKKRMKKE----------EVEKKVITPEDEKYKLGYGVAGKGVKLPWYLERPG--KDDAESDE

Query:  NDGSSRVGSGNVKK-GEKKTLEELRAERLKREQKEKGRERALIAERSRKSRTASR
        +DG         KK   KK+L+ELR ERLKRE+ EK RERAL  ++S+++   SR
Subjt:  NDGSSRVGSGNVKK-GEKKTLEELRAERLKREQKEKGRERALIAERSRKSRTASR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGAGCAGAACAAATTTCTACAAGAATCCTTCCATCTCCTACAAGAAGGACTTGAATCTCTCCTCCGCTCTTCAAAACCTAAGAGCGTATAACATTGCTACCGGCAA
TGCTCCTCCAACCGATGTTCAACCATCTCCTGTCGTGAAGAAGAACGAGAACCGGAAACGCCATCGGGAGCCAGAACTATCTGGTAGTCCAAAGTATGATGTTGGAAATA
ATGACGGCCCTATGTCTCATCAAGATTACATTGAAAGGAGAAGAAAAGAAGCAAATAAATCTCAACCTTATGTGACACTTACGGAAGATGTTTTGGGAGCTTCCAGCTTG
GGCTTGAACTTAGTTGAATATGAAAGTCTCTTGAATGATTACGAGGAAGTTAAAAGCAAAACTGAGCAGCGTTTTGCCATTGCGGGAGAACCTGTTTGTGTAGTATGTGG
TAGATATGGAGAATACATATGCAATGAAACCAATGATGACATCTGCAGCATGGAGTGCAAATTCAAGCTTTTGGAAATTCTTAAACGGAGCGAGGAGTCCTCAAACTGTG
AAGTGAAAGATGTTGCATTACCAGAAAGTAAATATATCCTGCCTTCCCCAGAGTTCGGGGAGGACACCTGGGATTATAAGAACCATCGCTGGTCCAAAAAGAAATCCAAT
CTTTGTACTTATGAATGTTGGAAATGTCAAAAGCCGGGACACCTTGCTGAAGATTGTTTGTTGAAAACCAGTAACCAGGTAATGCAACAAAGGACTTCCAACCCTGTACC
TGGCGATCTCCTTGGACTATATAAAAGGGTGACTCACATCAAGGATCTTCTGGTGTGTCATTACTGTTTTGACAAAGCTTTCGACAAGTTCTATGATATGTATACTGCAT
CTTGGCATCGGATGAACTGTTTTAACGCAGATGTAGAGGACACTGCCTACATCATCAATAGGAAAGCGAAAGAAGAGAACCTGCAGGTGAATCATAATCTTAGTTTCTTA
GATTTGGTGATTATGGGAGGTCATGGAGGTTTAAATATTCTTCCCCAAAAGCGATGGAACGTGTACAACTATGAGAACAGAGAGAAAGTGCGGCGAGATGAAGAAGCTGC
AGCCAAAGAAGAACAGCTTAAACGCGAGCAGGCTAGGAAAAGGGATGCTGAGTTTCGTCTCGAGCAGCTTCGTACTGCACGGGGTTTAGCTCCGGTAATTGACACTGCAA
AGCCAGTAGAAACAGACCTGAAACCTGGTCACATAAATCTATTTGAAGGCATCAAGATTTTTGACCCAGTTAAGGGTTCGGAAAATGGAGGAGTTGAAGATGGGTCTAAG
AAGAAGAGGATGAAGAAGGAAGAAGTGGAAAAAAAGGTCATCACACCTGAAGATGAGAAGTATAAGTTAGGTTATGGTGTTGCTGGAAAAGGAGTCAAATTGCCATGGTA
CCTTGAGAGGCCTGGCAAGGACGATGCTGAGAGTGATGAAAACGATGGATCGTCAAGAGTAGGGAGTGGAAATGTAAAAAAGGGAGAAAAAAAGACCTTGGAAGAATTGA
GGGCCGAGCGTCTGAAACGCGAGCAGAAGGAGAAGGGAAGGGAGCGTGCTTTAATCGCAGAGAGAAGTCGTAAGAGTAGAACAGCTTCAAGGGAAGGAGATTCATCTTCC
AGGAGGTAA
mRNA sequenceShow/hide mRNA sequence
GCGCGATCGAGCCAGGGGATATGTATATCAGATACCGGTCGATTCTTTAGCAAGCATAACAGAGGGCTGAAATCCGAGCAGCTCGAAAAATGGGGAGCAGAACAAATTTC
TACAAGAATCCTTCCATCTCCTACAAGAAGGACTTGAATCTCTCCTCCGCTCTTCAAAACCTAAGAGCGTATAACATTGCTACCGGCAATGCTCCTCCAACCGATGTTCA
ACCATCTCCTGTCGTGAAGAAGAACGAGAACCGGAAACGCCATCGGGAGCCAGAACTATCTGGTAGTCCAAAGTATGATGTTGGAAATAATGACGGCCCTATGTCTCATC
AAGATTACATTGAAAGGAGAAGAAAAGAAGCAAATAAATCTCAACCTTATGTGACACTTACGGAAGATGTTTTGGGAGCTTCCAGCTTGGGCTTGAACTTAGTTGAATAT
GAAAGTCTCTTGAATGATTACGAGGAAGTTAAAAGCAAAACTGAGCAGCGTTTTGCCATTGCGGGAGAACCTGTTTGTGTAGTATGTGGTAGATATGGAGAATACATATG
CAATGAAACCAATGATGACATCTGCAGCATGGAGTGCAAATTCAAGCTTTTGGAAATTCTTAAACGGAGCGAGGAGTCCTCAAACTGTGAAGTGAAAGATGTTGCATTAC
CAGAAAGTAAATATATCCTGCCTTCCCCAGAGTTCGGGGAGGACACCTGGGATTATAAGAACCATCGCTGGTCCAAAAAGAAATCCAATCTTTGTACTTATGAATGTTGG
AAATGTCAAAAGCCGGGACACCTTGCTGAAGATTGTTTGTTGAAAACCAGTAACCAGGTAATGCAACAAAGGACTTCCAACCCTGTACCTGGCGATCTCCTTGGACTATA
TAAAAGGGTGACTCACATCAAGGATCTTCTGGTGTGTCATTACTGTTTTGACAAAGCTTTCGACAAGTTCTATGATATGTATACTGCATCTTGGCATCGGATGAACTGTT
TTAACGCAGATGTAGAGGACACTGCCTACATCATCAATAGGAAAGCGAAAGAAGAGAACCTGCAGGTGAATCATAATCTTAGTTTCTTAGATTTGGTGATTATGGGAGGT
CATGGAGGTTTAAATATTCTTCCCCAAAAGCGATGGAACGTGTACAACTATGAGAACAGAGAGAAAGTGCGGCGAGATGAAGAAGCTGCAGCCAAAGAAGAACAGCTTAA
ACGCGAGCAGGCTAGGAAAAGGGATGCTGAGTTTCGTCTCGAGCAGCTTCGTACTGCACGGGGTTTAGCTCCGGTAATTGACACTGCAAAGCCAGTAGAAACAGACCTGA
AACCTGGTCACATAAATCTATTTGAAGGCATCAAGATTTTTGACCCAGTTAAGGGTTCGGAAAATGGAGGAGTTGAAGATGGGTCTAAGAAGAAGAGGATGAAGAAGGAA
GAAGTGGAAAAAAAGGTCATCACACCTGAAGATGAGAAGTATAAGTTAGGTTATGGTGTTGCTGGAAAAGGAGTCAAATTGCCATGGTACCTTGAGAGGCCTGGCAAGGA
CGATGCTGAGAGTGATGAAAACGATGGATCGTCAAGAGTAGGGAGTGGAAATGTAAAAAAGGGAGAAAAAAAGACCTTGGAAGAATTGAGGGCCGAGCGTCTGAAACGCG
AGCAGAAGGAGAAGGGAAGGGAGCGTGCTTTAATCGCAGAGAGAAGTCGTAAGAGTAGAACAGCTTCAAGGGAAGGAGATTCATCTTCCAGGAGGTAA
Protein sequenceShow/hide protein sequence
MGSRTNFYKNPSISYKKDLNLSSALQNLRAYNIATGNAPPTDVQPSPVVKKNENRKRHREPELSGSPKYDVGNNDGPMSHQDYIERRRKEANKSQPYVTLTEDVLGASSL
GLNLVEYESLLNDYEEVKSKTEQRFAIAGEPVCVVCGRYGEYICNETNDDICSMECKFKLLEILKRSEESSNCEVKDVALPESKYILPSPEFGEDTWDYKNHRWSKKKSN
LCTYECWKCQKPGHLAEDCLLKTSNQVMQQRTSNPVPGDLLGLYKRVTHIKDLLVCHYCFDKAFDKFYDMYTASWHRMNCFNADVEDTAYIINRKAKEENLQVNHNLSFL
DLVIMGGHGGLNILPQKRWNVYNYENREKVRRDEEAAAKEEQLKREQARKRDAEFRLEQLRTARGLAPVIDTAKPVETDLKPGHINLFEGIKIFDPVKGSENGGVEDGSK
KKRMKKEEVEKKVITPEDEKYKLGYGVAGKGVKLPWYLERPGKDDAESDENDGSSRVGSGNVKKGEKKTLEELRAERLKREQKEKGRERALIAERSRKSRTASREGDSSS
RR