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Lsi09G004440 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi09G004440
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr09:4678127..4681658
RNA-Seq ExpressionLsi09G004440
SyntenyLsi09G004440
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
BAS73364.1 Os01g0640400 [Oryza sativa Japonica Group]5.0e-1163.93Show/hide
Query:  SIGRTLPCMFPAKKARIGRCDTLFPPTFLRGFLGVLIVVSGKETSFPSLKTPSERSALHKA
        S G TLPC  PAKKAR+ R DT  PPT+  G LGV IVVSG +TS P +K PSE SALH A
Subjt:  SIGRTLPCMFPAKKARIGRCDTLFPPTFLRGFLGVLIVVSGKETSFPSLKTPSERSALHKA
KAB8082636.1 hypothetical protein EE612_004596 [Oryza sativa]5.0e-1163.93Show/hide
Query:  SIGRTLPCMFPAKKARIGRCDTLFPPTFLRGFLGVLIVVSGKETSFPSLKTPSERSALHKA
        S G TLPC  PAKKAR+ R DT  PPT+  G LGV IVVSG +TS P +K PSE SALH A
Subjt:  SIGRTLPCMFPAKKARIGRCDTLFPPTFLRGFLGVLIVVSGKETSFPSLKTPSERSALHKA
MCI80469.1 hypothetical protein [Trifolium medium]2.3e-1167.27Show/hide
Query:  MFPAKKARIGRCDTLFPPTFLRGFLGVLIVVSGKETSFPSLKTPSERSALHKAFM
        M PAKKARIGR D LFPP +LRG LG L+VVSG+ETS P++K  S+ SALH+AF+
Subjt:  MFPAKKARIGRCDTLFPPTFLRGFLGVLIVVSGKETSFPSLKTPSERSALHKAFM
TrEMBL top hitse value%identityAlignment
A0A0P0V5T0 Os01g0640400 protein2.4e-1163.93Show/hide
Query:  SIGRTLPCMFPAKKARIGRCDTLFPPTFLRGFLGVLIVVSGKETSFPSLKTPSERSALHKA
        S G TLPC  PAKKAR+ R DT  PPT+  G LGV IVVSG +TS P +K PSE SALH A
Subjt:  SIGRTLPCMFPAKKARIGRCDTLFPPTFLRGFLGVLIVVSGKETSFPSLKTPSERSALHKA
A0A392UZP7 Uncharacterized protein1.1e-1167.27Show/hide
Query:  MFPAKKARIGRCDTLFPPTFLRGFLGVLIVVSGKETSFPSLKTPSERSALHKAFM
        M PAKKARIGR D LFPP +LRG LG L+VVSG+ETS P++K  S+ SALH+AF+
Subjt:  MFPAKKARIGRCDTLFPPTFLRGFLGVLIVVSGKETSFPSLKTPSERSALHKAFM
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTAAGTATTGGACGGACTCTCCCATGCATGTTCCCAGCAAAGAAAGCAAGAATTGGACGCTGTGATACCCTTTTCCCACCAACATTCCTAAGAGGTTTCCTAGGTGT
CCTTATAGTAGTTTCTGGCAAGGAAACATCCTTCCCAAGTTTGAAAACCCCTTCTGAGAGATCAGCATTGCATAAAGCTTTTATG
mRNA sequenceShow/hide mRNA sequence
ATGGTAAGTATTGGACGGACTCTCCCATGCATGTTCCCAGCAAAGAAAGCAAGAATTGGACGCTGTGATACCCTTTTCCCACCAACATTCCTAAGAGGTTTCCTAGGTGT
CCTTATAGTAGTTTCTGGCAAGGAAACATCCTTCCCAAGTTTGAAAACCCCTTCTGAGAGATCAGCATTGCATAAAGCTTTTATG
Protein sequenceShow/hide protein sequence
MVSIGRTLPCMFPAKKARIGRCDTLFPPTFLRGFLGVLIVVSGKETSFPSLKTPSERSALHKAFM