; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi09G004680 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi09G004680
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description60S ribosomal protein L36
Genome locationchr09:4922309..4924712
RNA-Seq ExpressionLsi09G004680
SyntenyLsi09G004680
Gene Ontology termsGO:0002181 - cytoplasmic translation (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR000509 - Ribosomal protein L36e
IPR038097 - Ribosomal protein L36e domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6576718.1 60S ribosomal protein L36-2, partial [Cucurbita argyrosperma subsp. sororia]4.2e-5099.09Show/hide
Query:  MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKM
        MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMS+VLRKM
Subjt:  MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKM

Query:  RAGGGGEKKK
        RAGGGGEKKK
Subjt:  RAGGGGEKKK

KAG6579388.1 60S ribosomal protein L36-2, partial [Cucurbita argyrosperma subsp. sororia]9.3e-5098.18Show/hide
Query:  MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKM
        MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGK+SKRVLFVR+LIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKM
Subjt:  MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKM

Query:  RAGGGGEKKK
        RAGGGGEKKK
Subjt:  RAGGGGEKKK

KAG7014765.1 60S ribosomal protein L36-2, partial [Cucurbita argyrosperma subsp. argyrosperma]4.2e-5099.09Show/hide
Query:  MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKM
        MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMS+VLRKM
Subjt:  MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKM

Query:  RAGGGGEKKK
        RAGGGGEKKK
Subjt:  RAGGGGEKKK

XP_022923053.1 60S ribosomal protein L36-2-like isoform X1 [Cucurbita moschata]4.2e-5099.09Show/hide
Query:  MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKM
        MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMS+VLRKM
Subjt:  MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKM

Query:  RAGGGGEKKK
        RAGGGGEKKK
Subjt:  RAGGGGEKKK

XP_038878930.1 60S ribosomal protein L36-2-like [Benincasa hispida]5.5e-5098.18Show/hide
Query:  MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKM
        MAPKQPNTGLFVGLNKGH+VTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMS+VLRKM
Subjt:  MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKM

Query:  RAGGGGEKKK
        RAGGGGEKKK
Subjt:  RAGGGGEKKK

TrEMBL top hitse value%identityAlignment
A0A6J1E2F7 60S ribosomal protein L364.5e-5098.18Show/hide
Query:  MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKM
        MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGK+SKRVLFVR+LIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKM
Subjt:  MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKM

Query:  RAGGGGEKKK
        RAGGGGEKKK
Subjt:  RAGGGGEKKK

A0A6J1E5T2 60S ribosomal protein L362.0e-5099.09Show/hide
Query:  MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKM
        MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMS+VLRKM
Subjt:  MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKM

Query:  RAGGGGEKKK
        RAGGGGEKKK
Subjt:  RAGGGGEKKK

A0A6J1H2C5 60S ribosomal protein L367.7e-5098.18Show/hide
Query:  MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKM
        MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVR+LIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMS+VLRKM
Subjt:  MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKM

Query:  RAGGGGEKKK
        RAGGGGEKKK
Subjt:  RAGGGGEKKK

A0A6J1IDA3 60S ribosomal protein L364.5e-5098.18Show/hide
Query:  MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKM
        MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGK+SKRVLFVR+LIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKM
Subjt:  MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKM

Query:  RAGGGGEKKK
        RAGGGGEKKK
Subjt:  RAGGGGEKKK

A0A6J1JC29 60S ribosomal protein L362.0e-5099.09Show/hide
Query:  MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKM
        MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMS+VLRKM
Subjt:  MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKM

Query:  RAGGGGEKKK
        RAGGGGEKKK
Subjt:  RAGGGGEKKK

SwissProt top hitse value%identityAlignment
O80929 60S ribosomal protein L36-12.6e-3981.9Show/hide
Query:  TGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKMRAGGG--
        TGLFVGLNKGH+VT++ELAPRP+ RKGK+SKR +F+R LIREVAG APYEKRITELLKVGKDKRALKVAKRKLGTHKRAK+KREEMS+VLRKMR+ GG  
Subjt:  TGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKMRAGGG--

Query:  -GEKK
          EKK
Subjt:  -GEKK

P52866 60S ribosomal protein L364.4e-3483.52Show/hide
Query:  MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKRE
        MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGK+SKR  FVRNLIREVAGF PYEKRITELLKVGKDKRALKV + K+G H +  K+ E
Subjt:  MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKRE

Q9LRB8 60S ribosomal protein L361.6e-2871.88Show/hide
Query:  VGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKMRAGGGGE
        VGLNKGH VTKK   PRPS RKG  S+RV  VR ++REVAG+APYE+R+ ELLKVGKDKRALK+ KRKLGTH R KKKREEM+ VLRKM+A   GE
Subjt:  VGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKMRAGGGGE

Q9LZ57 60S ribosomal protein L36-33.1e-4082.86Show/hide
Query:  TGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKMRAGGGG-
        TGLFVGLNKGH+VTK+E  PRP++RKGK+SKR +F+RNLI+EVAG APYEKRITELLKVGKDKRALKVAKRKLGTHKRAK+KREEMS+VLRKMR+GG G 
Subjt:  TGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKMRAGGGG-

Query:  -EKKK
         EKKK
Subjt:  -EKKK

Q9M352 60S ribosomal protein L36-22.5e-4281.25Show/hide
Query:  MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKM
        M   Q  TGLFVGLNKGH+VT++ELAPRP  RKGK+SKR +F+RNLI+EVAG APYEKRITELLKVGKDKRALKVAKRKLGTHKRAK+KREEMS+VLRKM
Subjt:  MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKM

Query:  RAGGGG--EKKK
        R+GGGG  EKKK
Subjt:  RAGGGG--EKKK

Arabidopsis top hitse value%identityAlignment
AT2G37600.1 Ribosomal protein L36e family protein1.9e-4081.9Show/hide
Query:  TGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKMRAGGG--
        TGLFVGLNKGH+VT++ELAPRP+ RKGK+SKR +F+R LIREVAG APYEKRITELLKVGKDKRALKVAKRKLGTHKRAK+KREEMS+VLRKMR+ GG  
Subjt:  TGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKMRAGGG--

Query:  -GEKK
          EKK
Subjt:  -GEKK

AT3G53740.2 Ribosomal protein L36e family protein1.8e-4381.25Show/hide
Query:  MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKM
        M   Q  TGLFVGLNKGH+VT++ELAPRP  RKGK+SKR +F+RNLI+EVAG APYEKRITELLKVGKDKRALKVAKRKLGTHKRAK+KREEMS+VLRKM
Subjt:  MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKM

Query:  RAGGGG--EKKK
        R+GGGG  EKKK
Subjt:  RAGGGG--EKKK

AT3G53740.3 Ribosomal protein L36e family protein1.8e-4381.25Show/hide
Query:  MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKM
        M   Q  TGLFVGLNKGH+VT++ELAPRP  RKGK+SKR +F+RNLI+EVAG APYEKRITELLKVGKDKRALKVAKRKLGTHKRAK+KREEMS+VLRKM
Subjt:  MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKM

Query:  RAGGGG--EKKK
        R+GGGG  EKKK
Subjt:  RAGGGG--EKKK

AT3G53740.4 Ribosomal protein L36e family protein1.8e-4381.25Show/hide
Query:  MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKM
        M   Q  TGLFVGLNKGH+VT++ELAPRP  RKGK+SKR +F+RNLI+EVAG APYEKRITELLKVGKDKRALKVAKRKLGTHKRAK+KREEMS+VLRKM
Subjt:  MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKM

Query:  RAGGGG--EKKK
        R+GGGG  EKKK
Subjt:  RAGGGG--EKKK

AT5G02450.1 Ribosomal protein L36e family protein2.2e-4182.86Show/hide
Query:  TGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKMRAGGGG-
        TGLFVGLNKGH+VTK+E  PRP++RKGK+SKR +F+RNLI+EVAG APYEKRITELLKVGKDKRALKVAKRKLGTHKRAK+KREEMS+VLRKMR+GG G 
Subjt:  TGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKMRAGGGG-

Query:  -EKKK
         EKKK
Subjt:  -EKKK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCCAAAACAGCCGAATACAGGCCTTTTTGTTGGGCTGAACAAGGGCCACATAGTCACCAAGAAGGAGTTGGCCCCGCGACCCTCTGACCGTAAAGGAAAATCAAG
TAAAAGGGTTCTCTTTGTCCGGAACTTGATCCGAGAAGTTGCTGGTTTTGCGCCATATGAGAAGAGAATCACTGAGCTTCTGAAAGTTGGAAAGGACAAGCGTGCTCTGA
AGGTAGCCAAAAGAAAGCTCGGAACTCACAAGAGAGCAAAGAAGAAGCGTGAGGAAATGTCCAATGTTCTAAGAAAGATGAGGGCCGGTGGAGGTGGTGAGAAGAAAAAG
TGA
mRNA sequenceShow/hide mRNA sequence
GTTGCTTTCAAGTCGTTTCAGCACTGGAATAGGGCGTACATTTCTGGTCCGGTCGATCAATTTTCCAAAGCTCGATACCCTTAATTTCTTTGTGCCTTCGAATCTAAGTT
TATCTCTGTGTTTGCCATTTTTTAGAAGAATGATTTTTCTGTTTCTGAGTCGTTCTTACTAATAGATATCAGTTCAGTAATGGCTCCAAAACAGCCGAATACAGGCCTTT
TTGTTGGGCTGAACAAGGGCCACATAGTCACCAAGAAGGAGTTGGCCCCGCGACCCTCTGACCGTAAAGGAAAATCAAGTAAAAGGGTTCTCTTTGTCCGGAACTTGATC
CGAGAAGTTGCTGGTTTTGCGCCATATGAGAAGAGAATCACTGAGCTTCTGAAAGTTGGAAAGGACAAGCGTGCTCTGAAGGTAGCCAAAAGAAAGCTCGGAACTCACAA
GAGAGCAAAGAAGAAGCGTGAGGAAATGTCCAATGTTCTAAGAAAGATGAGGGCCGGTGGAGGTGGTGAGAAGAAAAAGTGAGATCTACACTTGCTCATTCATTCCAAGT
CTTACCCTCTGGCTACTCATTTTTGTTTGTTTTAGGGTTCAATTCGTCAGAGACCGAGCTCATAATCAATTTCAGTTTTGTTATTATTGAACTTGTTTTACTAACACCCA
ATTTTGTTATGGCCTCGTTTGTTTCAATGATGCATTATGGTTTGATGAATTAATTAGCCACTGTCATTTTTGAGTTTATGGTTGTACTTTTAATCCTTCTACCTCCTCTG
CTCTCATGCACGTGCACCGTGATTTATCAGTTTATTATATATTGGGTTTTAAAATTTGTGAGAAATTTAAGCATTCTTAAGAATTTTTTTTATAGTTTTATAATAAAATC
TTTCTAGAAATGTTCAT
Protein sequenceShow/hide protein sequence
MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKMRAGGGGEKKK