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Lsi09G005210 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi09G005210
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionTip5
Genome locationchr09:5432898..5459012
RNA-Seq ExpressionLsi09G005210
SyntenyLsi09G005210
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
No hits found
TrEMBL top hitse value%identityAlignment
A0A0A9C6C8 Uncharacterized protein4.0e-0744.71Show/hide
Query:  AAPINGPTQYTAWFLKLPATIADPNAHAGFTDPPENGPAASTLAPAINPIITVPIALHGPLLKSLA-AKTVYTKANVNRPSTSDA
        AAP NGP+QYT WF + P T A P   AGF D P   P A  LAP + P+    +    P L S A A TVYT   V   S + A
Subjt:  AAPINGPTQYTAWFLKLPATIADPNAHAGFTDPPENGPAASTLAPAINPIITVPIALHGPLLKSLA-AKTVYTKANVNRPSTSDA
A0A0A9U320 Tip51.3e-1351.46Show/hide
Query:  TSLVDAAPINGPTQYTAWFLKLPATIADPNAHAGFTDPPENGPAASTLAPAINPIITVPIALHG-----PLLKSLAAKTVYTKANVNRPSTSDAPKPVIS
        TS    API GP QYTAWFL  P T A PN  AGF D P   PAAST APA +P  + P A+       P   S A  TVYT  NV+ PS   AP PVIS
Subjt:  TSLVDAAPINGPTQYTAWFLKLPATIADPNAHAGFTDPPENGPAASTLAPAINPIITVPIALHG-----PLLKSLAAKTVYTKANVNRPSTSDAPKPVIS

Query:  SAM
        +A+
Subjt:  SAM
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGGTTTCGACCACGGGCGATATGATAGGTATACTTGATCAGTTTCTGAGATATCTCGTCGAAACTTCTCTCGTTGATGCCGCCCCAATCAATGGCCCAACCCAGTA
CACTGCCTGGTTCTTGAAACTCCCAGCCACAATTGCCGACCCGAACGCGCACGCCGGGTTCACCGATCCACCAGAAAATGGCCCGGCAGCCAGCACATTGGCTCCCGCCA
TCAACCCAATCATCACAGTGCCGATCGCATTGCACGGACCTCTTCTCAAGTCGCTGGCCGCGAAAACGGTGTATACTAAGGCAAATGTCAATAGACCTTCCACTAGCGAC
GCTCCGAAGCCAGTCATCTCTTCGGCGATGGCATAG
mRNA sequenceShow/hide mRNA sequence
AATAAAAGAAAATATTATCAGTAAATTTGAAAAATCCCTAAAATTACGGAAGATACGAAATCAACCATTAAATTAAGTAGCCGTTCGTCAATCCACGGTCAAACGCGCGG
TCAAATCGTAACCGTCAGCCCTCCGCCGATCGGTCGCTTCCGTATATACCTTCTTCCTCACCAAGTCTCTACTATCTTCTTCAGTTCATTCCCAAACATTCTCATAGAAG
CTTCTCTCATTGATGATGGTTTCGACCACGGGCGATATGATAGGTATACTTGATCAGTTTCTGAGATATCTCGTCGAAACTTCTCTCGTTGATGCCGCCCCAATCAATGG
CCCAACCCAGTACACTGCCTGGTTCTTGAAACTCCCAGCCACAATTGCCGACCCGAACGCGCACGCCGGGTTCACCGATCCACCAGAAAATGGCCCGGCAGCCAGCACAT
TGGCTCCCGCCATCAACCCAATCATCACAGTGCCGATCGCATTGCACGGACCTCTTCTCAAGTCGCTGGCCGCGAAAACGGTGTATACTAAGGCAAATGTCAATAGACCT
TCCACTAGCGACGCTCCGAAGCCAGTCATCTCTTCGGCGATGGCATAG
Protein sequenceShow/hide protein sequence
MMVSTTGDMIGILDQFLRYLVETSLVDAAPINGPTQYTAWFLKLPATIADPNAHAGFTDPPENGPAASTLAPAINPIITVPIALHGPLLKSLAAKTVYTKANVNRPSTSD
APKPVISSAMA