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Lsi09G005260 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi09G005260
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr09:5545595..5545921
RNA-Seq ExpressionLsi09G005260
SyntenyLsi09G005260
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605659.1 hypothetical protein SDJN03_02976, partial [Cucurbita argyrosperma subsp. sororia]4.4e-1164.29Show/hide
Query:  MASNKKHFLIILAIVLYLMLFLSTYGAARMILNPNNGTFSRNMKALEIKVIVVGRIVRRDLAHGGNYGPG
        M SNKKH LI L IVLYLMLFLS+YGAAR+ + PN      +M A E+K I +GRI+RRDLA+GGNY PG
Subjt:  MASNKKHFLIILAIVLYLMLFLSTYGAARMILNPNNGTFSRNMKALEIKVIVVGRIVRRDLAHGGNYGPG

KAG7035570.1 hypothetical protein SDJN02_02367, partial [Cucurbita argyrosperma subsp. argyrosperma]4.4e-1164.29Show/hide
Query:  MASNKKHFLIILAIVLYLMLFLSTYGAARMILNPNNGTFSRNMKALEIKVIVVGRIVRRDLAHGGNYGPG
        M SNKKH LI L IVLYLMLFLS+YGAAR+ + PN      +M A E+K I +GRI+RRDLA+GGNY PG
Subjt:  MASNKKHFLIILAIVLYLMLFLSTYGAARMILNPNNGTFSRNMKALEIKVIVVGRIVRRDLAHGGNYGPG

KGN50358.1 hypothetical protein Csa_000417 [Cucumis sativus]5.5e-1470.27Show/hide
Query:  MDEMASNKKHFLIILAIVLYLMLFLSTYGAARMILNPNNGTFSRNMKALEIKVIVVG-RIVRRDLAHGGNYGPG
        M++MAS KKH LIILA +LYLMLFLSTYGAAR++        + +MK  EIKVIVVG RIVRRDLAHGGNYGPG
Subjt:  MDEMASNKKHFLIILAIVLYLMLFLSTYGAARMILNPNNGTFSRNMKALEIKVIVVG-RIVRRDLAHGGNYGPG

TrEMBL top hitse value%identityAlignment
A0A0A0KL54 Uncharacterized protein2.7e-1470.27Show/hide
Query:  MDEMASNKKHFLIILAIVLYLMLFLSTYGAARMILNPNNGTFSRNMKALEIKVIVVG-RIVRRDLAHGGNYGPG
        M++MAS KKH LIILA +LYLMLFLSTYGAAR++        + +MK  EIKVIVVG RIVRRDLAHGGNYGPG
Subjt:  MDEMASNKKHFLIILAIVLYLMLFLSTYGAARMILNPNNGTFSRNMKALEIKVIVVG-RIVRRDLAHGGNYGPG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGAAATGGCTTCCAATAAGAAGCACTTCTTGATAATTTTAGCAATTGTCTTGTATCTTATGCTTTTCCTTTCAACCTATGGGGCAGCAAGGATGATCTTGAATCC
AAATAATGGTACATTTTCCAGAAATATGAAGGCCCTAGAGATCAAGGTTATTGTAGTAGGACGAATTGTACGACGAGATTTGGCACATGGAGGAAATTATGGTCCGGGAA
AT
mRNA sequenceShow/hide mRNA sequence
ATGGATGAAATGGCTTCCAATAAGAAGCACTTCTTGATAATTTTAGCAATTGTCTTGTATCTTATGCTTTTCCTTTCAACCTATGGGGCAGCAAGGATGATCTTGAATCC
AAATAATGGTACATTTTCCAGAAATATGAAGGCCCTAGAGATCAAGGTTATTGTAGTAGGACGAATTGTACGACGAGATTTGGCACATGGAGGAAATTATGGTCCGGGAA
AT
Protein sequenceShow/hide protein sequence
MDEMASNKKHFLIILAIVLYLMLFLSTYGAARMILNPNNGTFSRNMKALEIKVIVVGRIVRRDLAHGGNYGPGN