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Lsi09G005690 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi09G005690
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionNADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12
Genome locationchr09:6125005..6137738
RNA-Seq ExpressionLsi09G005690
SyntenyLsi09G005690
Gene Ontology termsGO:0006979 - response to oxidative stress (biological process)
GO:0032981 - mitochondrial respiratory chain complex I assembly (biological process)
GO:0005747 - mitochondrial respiratory chain complex I (cellular component)
InterPro domainsIPR007763 - NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004143640.2 probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 [Cucumis sativus]1.4e-14100Show/hide
Query:  KCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQKVDEETQY
        KCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQKVDEETQY
Subjt:  KCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQKVDEETQY
XP_022958111.1 probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 [Cucurbita moschata]3.1e-1497.5Show/hide
Query:  KCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQKVDEETQY
        KCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQK+DEETQY
Subjt:  KCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQKVDEETQY
XP_023534747.1 probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 [Cucurbita pepo subsp. pepo]3.1e-1497.5Show/hide
Query:  KCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQKVDEETQY
        KCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQK+DEETQY
Subjt:  KCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQKVDEETQY
XP_023550885.1 probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 isoform X1 [Cucurbita pepo subsp. pepo]6.8e-1495Show/hide
Query:  KCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQKVDEETQY
        KCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQK+DE+TQY
Subjt:  KCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQKVDEETQY
XP_038875755.1 probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 [Benincasa hispida]3.1e-1497.5Show/hide
Query:  KCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQKVDEETQY
        KCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQ+VDEETQY
Subjt:  KCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQKVDEETQY
TrEMBL top hitse value%identityAlignment
A0A0A0KNC9 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 126.7e-15100Show/hide
Query:  KCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQKVDEETQY
        KCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQKVDEETQY
Subjt:  KCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQKVDEETQY
A0A6J1ELZ2 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 123.3e-1495Show/hide
Query:  KCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQKVDEETQY
        KCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQK+DE+TQY
Subjt:  KCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQKVDEETQY
A0A6J1H155 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 121.5e-1497.5Show/hide
Query:  KCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQKVDEETQY
        KCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQK+DEETQY
Subjt:  KCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQKVDEETQY
A0A6J1HZ90 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 127.4e-1492.5Show/hide
Query:  KCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQKVDEETQY
        KCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQ++DE+TQY
Subjt:  KCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQKVDEETQY
A0A6J1K5W7 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 127.4e-1495Show/hide
Query:  KCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQKVDEETQY
        KCLPDGNLLQTKIH IGATLVGVDKFGNKYYQK+DEETQY
Subjt:  KCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQKVDEETQY
SwissProt top hitse value%identityAlignment
Q9M9M9 Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 121.2e-1387.5Show/hide
Query:  KCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQKVDEETQY
        +CLPDGNLLQTKIHNIGATLVGVDKFGNKYYQK+  +TQY
Subjt:  KCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQKVDEETQY
Arabidopsis top hitse value%identityAlignment
AT3G03100.1 NADH:ubiquinone oxidoreductase, 17.2kDa subunit8.6e-1587.5Show/hide
Query:  KCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQKVDEETQY
        +CLPDGNLLQTKIHNIGATLVGVDKFGNKYYQK+  +TQY
Subjt:  KCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQKVDEETQY
AT3G03100.2 NADH:ubiquinone oxidoreductase, 17.2kDa subunit8.6e-1587.5Show/hide
Query:  KCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQKVDEETQY
        +CLPDGNLLQTKIHNIGATLVGVDKFGNKYYQK+  +TQY
Subjt:  KCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQKVDEETQY

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAAATGCCTACCCGACGGAAACCTATTGCAAACAAAAATCCACAACATTGGTGCGACACTTGTGGGTGTTGATAAGTTTGGTAATAAATATTACCAGAAGGTTGA
TGAAGAGACTCAATATGCGAATATTGGGAACTGCAAGATATTTACCTTCAAGACAAATATCACCAGACCAAGCAAGATTGATAATGTTGCTGGAAGATTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCGAAATGCCTACCCGACGGAAACCTATTGCAAACAAAAATCCACAACATTGGTGCGACACTTGTGGGTGTTGATAAGTTTGGTAATAAATATTACCAGAAGGTTGA
TGAAGAGACTCAATATGCGAATATTGGGAACTGCAAGATATTTACCTTCAAGACAAATATCACCAGACCAAGCAAGATTGATAATGTTGCTGGAAGATTTTAG
Protein sequenceShow/hide protein sequence
MAKCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQKVDEETQYANIGNCKIFTFKTNITRPSKIDNVAGRF