; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi09G006030 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi09G006030
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description50S ribosomal protein L2, chloroplastic
Genome locationchr09:6577187..6579132
RNA-Seq ExpressionLsi09G006030
SyntenyLsi09G006030
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0015934 - large ribosomal subunit (cellular component)
GO:0015935 - small ribosomal subunit (cellular component)
GO:0003729 - mRNA binding (molecular function)
GO:0019843 - rRNA binding (molecular function)
GO:0016740 - transferase activity (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR005880 - Ribosomal protein L2, bacterial/organellar-type
IPR022671 - Ribosomal protein L2, conserved site
IPR022669 - Ribosomal protein L2, C-terminal
IPR022666 - Ribosomal Proteins L2, RNA binding domain
IPR014726 - Ribosomal protein L2, domain 3
IPR014722 - Ribosomal protein L2, domain 2
IPR012678 - Ribosomal protein L23/L15e core domain superfamily
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR012340 - Nucleic acid-binding, OB-fold
IPR008991 - Translation protein SH3-like domain superfamily
IPR002171 - Ribosomal protein L2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
BBN69974.1 hypothetical protein Prudu_1306S000300, partial [Prunus dulcis]2.4e-15280.06Show/hide
Query:  SVSMESHHPYITN-WCGSTRTEIKHWVELFFGVKV---------------------IAMNSHRLPGKGRRMGP-----------IMGHTMHYRRRNARGI
        S+ +   + Y +N   GSTRTEIKHW ELFFGVK                      +A++ ++      R G            I G     + RNARGI
Subjt:  SVSMESHHPYITN-WCGSTRTEIKHWVELFFGVKV---------------------IAMNSHRLPGKGRRMGP-----------IMGHTMHYRRRNARGI

Query:  ITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLSAISSSTSRKPYALEE
        ITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLSAISSSTSRKPYALEE
Subjt:  ITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLSAISSSTSRKPYALEE

Query:  ACTVWEGVLIDQKEESTSTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNAGVNQKSLGRAGSKCWL
        ACTVWEGVLIDQKEESTSTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGN GVNQKSLG+AGSKCWL
Subjt:  ACTVWEGVLIDQKEESTSTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNAGVNQKSLGRAGSKCWL

Query:  GKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRS
        GKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRR+
Subjt:  GKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRS

RZC57988.1 hypothetical protein C5167_005297 [Papaver somniferum]2.9e-15876.71Show/hide
Query:  SVSMESHHPYITN-WCGSTRTEIKHWVELFFGVKVIAMNSHRLPGKGRRMGPIMGHTMHYRR--------------------------------------
        S+ +  ++ Y +N   GSTRTEIKHWVELFFGVKVIAMNSHRLPGKGRRMGP MGHTMHY+R                                      
Subjt:  SVSMESHHPYITN-WCGSTRTEIKHWVELFFGVKVIAMNSHRLPGKGRRMGPIMGHTMHYRR--------------------------------------

Query:  -----------------------------RNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIG
                                     RNARGIITA HRGGGHKRLYRKIDFRRNEKDI GRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIG
Subjt:  -----------------------------RNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIG

Query:  DTIVSGTEVPIKMGNALPLSAISSSTSRKPYALEEACTVWEGVLIDQKEESTSTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSG
        DTIVSGTEVPI MGNALPLSAIS  TSRKPYALEEACTVWEGVLIDQKEESTSTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSG
Subjt:  DTIVSGTEVPIKMGNALPLSAISSSTSRKPYALEEACTVWEGVLIDQKEESTSTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSG

Query:  EVRLISKNCSATVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRR
        EVRLISKNCSATVGQVGN GVNQKSLGRAGSK WLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRK+P TPWGYPALGRRSRKRNKYSD+LILRRR
Subjt:  EVRLISKNCSATVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRR

RZC57999.1 hypothetical protein C5167_005306 [Papaver somniferum]5.3e-15283.04Show/hide
Query:  SVSMESHHPYITN-WCGSTRTEIKHWVELFFGVKVIAMNSHRLPGKGRRMGPIMGHTMHYRR--------------RNARGIITAGHRGGGHKRLYRKID
        S+ +  ++ Y +N   GSTRTEIKHWVELFFGVKVIAMNSHR PGKGRRMGP MGHTMHY+R              RNARGIITA HRGGGHKRLYRKID
Subjt:  SVSMESHHPYITN-WCGSTRTEIKHWVELFFGVKVIAMNSHRLPGKGRRMGPIMGHTMHYRR--------------RNARGIITAGHRGGGHKRLYRKID

Query:  FRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLSAISSSTSRKPYALEEACTVWEGVLIDQKEESTS
        FRRNEKDI GRIVTIEYDPNRNAYICLIHY DGEKRYILHPRGAIIGDTIVSGT+VPI MGN+LPLS        +PYALEEACTVWEGVLID+KEESTS
Subjt:  FRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLSAISSSTSRKPYALEEACTVWEGVLIDQKEESTS

Query:  TDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPH
        TD+PLGTAIHNIEITL  GGQL RAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGN GVNQKSLGRAGSK WLGKRPVVRGVVMN VDHPH
Subjt:  TDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPH

Query:  GGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRR
        GGGEGRAPIGRK+P TPWGYPALGRRSRKRNKY+D+LIL RR
Subjt:  GGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRR

RZC68911.1 hypothetical protein C5167_032124 [Papaver somniferum]5.1e-15581.11Show/hide
Query:  SVSMESHHPYITN-WCGSTRTEIKHWVELFFGVKVIAMNSHRLPGKGRRMGPIMGHTMHYRR------------------------------RNARGIIT
        S+ +  ++ Y +N   GSTRTEIKHWVELFFGVKVIAMNSHRLPGKGRRMGP MGHTMHY+R                              RNARGIIT
Subjt:  SVSMESHHPYITN-WCGSTRTEIKHWVELFFGVKVIAMNSHRLPGKGRRMGPIMGHTMHYRR------------------------------RNARGIIT

Query:  AGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLSAISSSTSRKPYALEEAC
        A HRGGGHKRLYRKIDFRRNEKDI GRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPI M NALPLSA+        YALEEAC
Subjt:  AGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLSAISSSTSRKPYALEEAC

Query:  TVWEGVLIDQKEESTSTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNAGVNQKSLGRAGSKCWLGK
        TVWEGVLIDQKEESTSTDMPLGTAIHNIEITLGKGGQLARA GAVAKLIAKEGKSATLKLPSGEVRLISKNC ATVGQVGN GVNQKSLGR+GSK WLGK
Subjt:  TVWEGVLIDQKEESTSTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNAGVNQKSLGRAGSKCWLGK

Query:  RPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK
        RPVVRGVVMNPVDHPHGGGEGRAPIGRK+P TPWGYPALGRRS+KRNKYSD+LILRRR+K
Subjt:  RPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK

RZC70927.1 hypothetical protein C5167_034129 [Papaver somniferum]9.9e-15184.62Show/hide
Query:  GSTRTEIKHWVELFFGVKVIAMNSHRLPGKGRRMGPIMGHTM-----HY------------------RRRNARGIITAGHRGGGHKRLYRKIDFRRNEKD
        GSTRTEIKHWVELFFGVKVIAMNSHRLP KGR MGP   +       HY                  + RN RGIITA HRGGGHKRLY KIDFRRNEKD
Subjt:  GSTRTEIKHWVELFFGVKVIAMNSHRLPGKGRRMGPIMGHTM-----HY------------------RRRNARGIITAGHRGGGHKRLYRKIDFRRNEKD

Query:  IYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLSAISSSTSRKPYALEEACTVWEGVLIDQKEESTSTDMPLGT
        I GRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRG IIGDTIVSGTEVPI MGNALPLSAIS  TSRKPYALEEACTVWE VLIDQKEESTST MPLGT
Subjt:  IYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLSAISSSTSRKPYALEEACTVWEGVLIDQKEESTSTDMPLGT

Query:  AIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRA
        AIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKL SGEVRLISK CSATVGQVGN GVNQKSLGR GSKCWLGKRPVVRGVVMNPVDHPHGGGEGRA
Subjt:  AIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRA

Query:  PIGRKKPATPWGYPALG-RRSRKRNKYSDNLILRRRSK
        PIGRK+P TPWGYPALG RRSRKRNKYSD+LILRRR+K
Subjt:  PIGRKKPATPWGYPALG-RRSRKRNKYSDNLILRRRSK

TrEMBL top hitse value%identityAlignment
A0A4Y7JDX5 Ribosomal_L2_C domain-containing protein1.4e-15876.71Show/hide
Query:  SVSMESHHPYITN-WCGSTRTEIKHWVELFFGVKVIAMNSHRLPGKGRRMGPIMGHTMHYRR--------------------------------------
        S+ +  ++ Y +N   GSTRTEIKHWVELFFGVKVIAMNSHRLPGKGRRMGP MGHTMHY+R                                      
Subjt:  SVSMESHHPYITN-WCGSTRTEIKHWVELFFGVKVIAMNSHRLPGKGRRMGPIMGHTMHYRR--------------------------------------

Query:  -----------------------------RNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIG
                                     RNARGIITA HRGGGHKRLYRKIDFRRNEKDI GRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIG
Subjt:  -----------------------------RNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIG

Query:  DTIVSGTEVPIKMGNALPLSAISSSTSRKPYALEEACTVWEGVLIDQKEESTSTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSG
        DTIVSGTEVPI MGNALPLSAIS  TSRKPYALEEACTVWEGVLIDQKEESTSTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSG
Subjt:  DTIVSGTEVPIKMGNALPLSAISSSTSRKPYALEEACTVWEGVLIDQKEESTSTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSG

Query:  EVRLISKNCSATVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRR
        EVRLISKNCSATVGQVGN GVNQKSLGRAGSK WLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRK+P TPWGYPALGRRSRKRNKYSD+LILRRR
Subjt:  EVRLISKNCSATVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRR

A0A4Y7JE26 Ribosomal_L2_C domain-containing protein2.5e-15283.04Show/hide
Query:  SVSMESHHPYITN-WCGSTRTEIKHWVELFFGVKVIAMNSHRLPGKGRRMGPIMGHTMHYRR--------------RNARGIITAGHRGGGHKRLYRKID
        S+ +  ++ Y +N   GSTRTEIKHWVELFFGVKVIAMNSHR PGKGRRMGP MGHTMHY+R              RNARGIITA HRGGGHKRLYRKID
Subjt:  SVSMESHHPYITN-WCGSTRTEIKHWVELFFGVKVIAMNSHRLPGKGRRMGPIMGHTMHYRR--------------RNARGIITAGHRGGGHKRLYRKID

Query:  FRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLSAISSSTSRKPYALEEACTVWEGVLIDQKEESTS
        FRRNEKDI GRIVTIEYDPNRNAYICLIHY DGEKRYILHPRGAIIGDTIVSGT+VPI MGN+LPLS        +PYALEEACTVWEGVLID+KEESTS
Subjt:  FRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLSAISSSTSRKPYALEEACTVWEGVLIDQKEESTS

Query:  TDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPH
        TD+PLGTAIHNIEITL  GGQL RAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGN GVNQKSLGRAGSK WLGKRPVVRGVVMN VDHPH
Subjt:  TDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPH

Query:  GGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRR
        GGGEGRAPIGRK+P TPWGYPALGRRSRKRNKY+D+LIL RR
Subjt:  GGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRR

A0A4Y7K9N1 Ribosomal_L2_C domain-containing protein2.5e-15581.11Show/hide
Query:  SVSMESHHPYITN-WCGSTRTEIKHWVELFFGVKVIAMNSHRLPGKGRRMGPIMGHTMHYRR------------------------------RNARGIIT
        S+ +  ++ Y +N   GSTRTEIKHWVELFFGVKVIAMNSHRLPGKGRRMGP MGHTMHY+R                              RNARGIIT
Subjt:  SVSMESHHPYITN-WCGSTRTEIKHWVELFFGVKVIAMNSHRLPGKGRRMGPIMGHTMHYRR------------------------------RNARGIIT

Query:  AGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLSAISSSTSRKPYALEEAC
        A HRGGGHKRLYRKIDFRRNEKDI GRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPI M NALPLSA+        YALEEAC
Subjt:  AGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLSAISSSTSRKPYALEEAC

Query:  TVWEGVLIDQKEESTSTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNAGVNQKSLGRAGSKCWLGK
        TVWEGVLIDQKEESTSTDMPLGTAIHNIEITLGKGGQLARA GAVAKLIAKEGKSATLKLPSGEVRLISKNC ATVGQVGN GVNQKSLGR+GSK WLGK
Subjt:  TVWEGVLIDQKEESTSTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNAGVNQKSLGRAGSKCWLGK

Query:  RPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK
        RPVVRGVVMNPVDHPHGGGEGRAPIGRK+P TPWGYPALGRRS+KRNKYSD+LILRRR+K
Subjt:  RPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK

A0A4Y7KDM0 Ribosomal_L2_C domain-containing protein4.8e-15184.62Show/hide
Query:  GSTRTEIKHWVELFFGVKVIAMNSHRLPGKGRRMGPIMGHTM-----HY------------------RRRNARGIITAGHRGGGHKRLYRKIDFRRNEKD
        GSTRTEIKHWVELFFGVKVIAMNSHRLP KGR MGP   +       HY                  + RN RGIITA HRGGGHKRLY KIDFRRNEKD
Subjt:  GSTRTEIKHWVELFFGVKVIAMNSHRLPGKGRRMGPIMGHTM-----HY------------------RRRNARGIITAGHRGGGHKRLYRKIDFRRNEKD

Query:  IYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLSAISSSTSRKPYALEEACTVWEGVLIDQKEESTSTDMPLGT
        I GRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRG IIGDTIVSGTEVPI MGNALPLSAIS  TSRKPYALEEACTVWE VLIDQKEESTST MPLGT
Subjt:  IYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLSAISSSTSRKPYALEEACTVWEGVLIDQKEESTSTDMPLGT

Query:  AIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRA
        AIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKL SGEVRLISK CSATVGQVGN GVNQKSLGR GSKCWLGKRPVVRGVVMNPVDHPHGGGEGRA
Subjt:  AIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRA

Query:  PIGRKKPATPWGYPALG-RRSRKRNKYSDNLILRRRSK
        PIGRK+P TPWGYPALG RRSRKRNKYSD+LILRRR+K
Subjt:  PIGRKKPATPWGYPALG-RRSRKRNKYSDNLILRRRSK

A0A5H2XTF6 Ribosomal_L2_C domain-containing protein (Fragment)1.1e-15280.06Show/hide
Query:  SVSMESHHPYITN-WCGSTRTEIKHWVELFFGVKV---------------------IAMNSHRLPGKGRRMGP-----------IMGHTMHYRRRNARGI
        S+ +   + Y +N   GSTRTEIKHW ELFFGVK                      +A++ ++      R G            I G     + RNARGI
Subjt:  SVSMESHHPYITN-WCGSTRTEIKHWVELFFGVKV---------------------IAMNSHRLPGKGRRMGP-----------IMGHTMHYRRRNARGI

Query:  ITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLSAISSSTSRKPYALEE
        ITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLSAISSSTSRKPYALEE
Subjt:  ITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLSAISSSTSRKPYALEE

Query:  ACTVWEGVLIDQKEESTSTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNAGVNQKSLGRAGSKCWL
        ACTVWEGVLIDQKEESTSTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGN GVNQKSLG+AGSKCWL
Subjt:  ACTVWEGVLIDQKEESTSTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNAGVNQKSLGRAGSKCWL

Query:  GKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRS
        GKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRR+
Subjt:  GKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRS

SwissProt top hitse value%identityAlignment
B1A976 50S ribosomal protein L2, chloroplastic7.4e-12586.57Show/hide
Query:  RNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLSAISSSTSRK
        RNARGIITA HRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPL          
Subjt:  RNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLSAISSSTSRK

Query:  PYALEEACTVWEGVLIDQKEESTSTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNAGVNQKSLGRA
                                TDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGN GVNQKSLGRA
Subjt:  PYALEEACTVWEGVLIDQKEESTSTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNAGVNQKSLGRA

Query:  GSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK
        GSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK
Subjt:  GSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK

Q09MB2 50S ribosomal protein L2, chloroplastic1.3e-12485.82Show/hide
Query:  RNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLSAISSSTSRK
        RNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPL          
Subjt:  RNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLSAISSSTSRK

Query:  PYALEEACTVWEGVLIDQKEESTSTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNAGVNQKSLGRA
                                TDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGN G NQKSLGRA
Subjt:  PYALEEACTVWEGVLIDQKEESTSTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNAGVNQKSLGRA

Query:  GSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK
        GSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRK+PATPWGYPALGRRSRKRNKYSDNLILRRR+K
Subjt:  GSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK

Q0ZIX7 50S ribosomal protein L2, chloroplastic2.6e-12586.57Show/hide
Query:  RNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLSAISSSTSRK
        RNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPL          
Subjt:  RNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLSAISSSTSRK

Query:  PYALEEACTVWEGVLIDQKEESTSTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNAGVNQKSLGRA
                                TDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGN GVNQKSLGRA
Subjt:  PYALEEACTVWEGVLIDQKEESTSTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNAGVNQKSLGRA

Query:  GSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK
        GSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKP TPWGYPALGRRSRKRNKYSDNLILRRRSK
Subjt:  GSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK

Q2L944 50S ribosomal protein L2, chloroplastic1.7e-12486.19Show/hide
Query:  RNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLSAISSSTSRK
        RNARGIITA HRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPL          
Subjt:  RNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLSAISSSTSRK

Query:  PYALEEACTVWEGVLIDQKEESTSTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNAGVNQKSLGRA
                                TDMPLGTAIHNIEITLG+GGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGN GVNQKSLGRA
Subjt:  PYALEEACTVWEGVLIDQKEESTSTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNAGVNQKSLGRA

Query:  GSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK
        GSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK
Subjt:  GSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK

Q4VZK5 50S ribosomal protein L2, chloroplastic3.0e-12687.31Show/hide
Query:  RNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLSAISSSTSRK
        RNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPL          
Subjt:  RNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLSAISSSTSRK

Query:  PYALEEACTVWEGVLIDQKEESTSTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNAGVNQKSLGRA
                                TDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNAGVNQKSLGRA
Subjt:  PYALEEACTVWEGVLIDQKEESTSTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNAGVNQKSLGRA

Query:  GSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK
        GSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK
Subjt:  GSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK

Arabidopsis top hitse value%identityAlignment
AT2G44065.1 Ribosomal protein L2 family1.1e-2548.41Show/hide
Query:  MPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATL-KLPSGEVRLISKNCSATVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHG
        M +GT IHNIE+  G+G ++ RAAG  AK++ +  K   L KLPSG+ + I+  C AT+G V N     K L +AG   WLG RP VRGV MNP DHPHG
Subjt:  MPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATL-KLPSGEVRLISKNCSATVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHG

Query:  GGEGRAPIGRKKPAT---PWGYPALG
        GGEG++     +  T   PWG P  G
Subjt:  GGEGRAPIGRKKPAT---PWGYPALG

AT2G44065.2 Ribosomal protein L2 family1.1e-2548.41Show/hide
Query:  MPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATL-KLPSGEVRLISKNCSATVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHG
        M +GT IHNIE+  G+G ++ RAAG  AK++ +  K   L KLPSG+ + I+  C AT+G V N     K L +AG   WLG RP VRGV MNP DHPHG
Subjt:  MPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATL-KLPSGEVRLISKNCSATVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHG

Query:  GGEGRAPIGRKKPAT---PWGYPALG
        GGEG++     +  T   PWG P  G
Subjt:  GGEGRAPIGRKKPAT---PWGYPALG

AT3G51190.1 Ribosomal protein L2 family3.9e-2029.86Show/hide
Query:  MGHTMHYRRRNARGIITAG---HRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGD-----GEKRYILHPRGAIIGDTIVSGTEVPIK
        MG  +  +R+ A G +      HR G  K  +R +D+      + G +  I +DP R A +  + +        +K   +   G   G  +  G +  + 
Subjt:  MGHTMHYRRRNARGIITAG---HRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGD-----GEKRYILHPRGAIIGDTIVSGTEVPIK

Query:  MGNALPLSAISSSTSRKPYALEEACTVWEGVLIDQKEESTSTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSAT--LKLPSGEVRLISKNCS
        +GN LPL +I                                  P G  I N+E+ +G  G LARA+G  A +IA   +S T  +KLPSG  +++   C 
Subjt:  MGNALPLSAISSSTSRKPYALEEACTVWEGVLIDQKEESTSTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSAT--LKLPSGEVRLISKNCS

Query:  ATVGQVGNAGVNQKSLGRAGS---------KCWLGKRPVVRGVVMNPVDHPHGGGE----GRAPIGR--KKPATPWGYPALGRRSRKR
        A +GQV   G  +K L +AG+          CW    PVVRGV MNPV+HPHGGG     G A   R  K      G  A  R  R+R
Subjt:  ATVGQVGNAGVNQKSLGRAGS---------KCWLGKRPVVRGVVMNPVDHPHGGGE----GRAPIGR--KKPATPWGYPALGRRSRKR

ATCG00830.1 ribosomal protein L22.7e-12283.96Show/hide
Query:  RNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLSAISSSTSRK
        RNARGIITA HRGGGHKRLYRKIDFRRN KDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPL          
Subjt:  RNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLSAISSSTSRK

Query:  PYALEEACTVWEGVLIDQKEESTSTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNAGVNQKSLGRA
                                TDMPLGTAIHNIEITLG+GGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGN GVNQKSLGRA
Subjt:  PYALEEACTVWEGVLIDQKEESTSTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNAGVNQKSLGRA

Query:  GSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK
        GSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKP TPWGYPALGRR+RKR KYS+ LILRRRSK
Subjt:  GSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK

ATCG01310.1 ribosomal protein L22.7e-12283.96Show/hide
Query:  RNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLSAISSSTSRK
        RNARGIITA HRGGGHKRLYRKIDFRRN KDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPL          
Subjt:  RNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLSAISSSTSRK

Query:  PYALEEACTVWEGVLIDQKEESTSTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNAGVNQKSLGRA
                                TDMPLGTAIHNIEITLG+GGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGN GVNQKSLGRA
Subjt:  PYALEEACTVWEGVLIDQKEESTSTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNAGVNQKSLGRA

Query:  GSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK
        GSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKP TPWGYPALGRR+RKR KYS+ LILRRRSK
Subjt:  GSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGACCCTCCAATAAGTCTATTGGAATTGGCTCTGTATCGATGGAATCTCATCATCCATACATAACGAATTGGTGTGGATCAACTAGGACAGAAATAAAGCATTGGGT
CGAACTCTTCTTTGGTGTCAAGGTAATAGCTATGAATAGTCATCGACTCCCGGGAAAGGGTAGAAGAATGGGACCTATTATGGGACATACAATGCATTACAGACGTCGTA
ATGCCAGAGGAATCATTACCGCAGGGCATAGAGGGGGAGGTCATAAGCGTCTATACCGTAAAATCGATTTTCGACGGAATGAAAAAGACATATATGGTAGAATCGTAACC
ATAGAATACGACCCTAATCGAAATGCATACATTTGTCTCATACACTATGGGGATGGTGAGAAAAGATATATTTTACATCCCAGAGGGGCTATAATTGGAGATACCATTGT
TTCTGGTACAGAAGTTCCTATAAAAATGGGAAATGCCCTACCTTTGAGTGCGATATCATCATCTACATCCAGAAAGCCGTATGCTTTGGAAGAAGCTTGTACAGTTTGGG
AAGGGGTTTTGATTGATCAAAAAGAAGAATCTACTTCAACCGATATGCCCTTAGGCACGGCCATACATAACATAGAAATCACACTTGGGAAGGGGGGACAATTAGCTAGA
GCAGCAGGTGCTGTAGCGAAACTGATTGCAAAAGAGGGGAAATCGGCCACATTAAAATTACCTTCTGGGGAGGTCCGTTTGATATCCAAAAATTGCTCAGCAACAGTCGG
ACAAGTGGGGAATGCTGGGGTAAACCAGAAAAGTTTGGGTAGAGCCGGATCTAAATGTTGGCTAGGTAAGCGTCCTGTAGTAAGAGGAGTAGTTATGAACCCTGTAGACC
ATCCCCATGGGGGTGGTGAAGGGAGGGCCCCAATTGGTAGAAAAAAACCCGCAACCCCTTGGGGTTATCCTGCACTTGGAAGAAGAAGTAGAAAAAGGAATAAATATAGT
GATAATTTGATTCTTCGTCGCCGTAGTAAATAA
mRNA sequenceShow/hide mRNA sequence
ATGGGACCCTCCAATAAGTCTATTGGAATTGGCTCTGTATCGATGGAATCTCATCATCCATACATAACGAATTGGTGTGGATCAACTAGGACAGAAATAAAGCATTGGGT
CGAACTCTTCTTTGGTGTCAAGGTAATAGCTATGAATAGTCATCGACTCCCGGGAAAGGGTAGAAGAATGGGACCTATTATGGGACATACAATGCATTACAGACGTCGTA
ATGCCAGAGGAATCATTACCGCAGGGCATAGAGGGGGAGGTCATAAGCGTCTATACCGTAAAATCGATTTTCGACGGAATGAAAAAGACATATATGGTAGAATCGTAACC
ATAGAATACGACCCTAATCGAAATGCATACATTTGTCTCATACACTATGGGGATGGTGAGAAAAGATATATTTTACATCCCAGAGGGGCTATAATTGGAGATACCATTGT
TTCTGGTACAGAAGTTCCTATAAAAATGGGAAATGCCCTACCTTTGAGTGCGATATCATCATCTACATCCAGAAAGCCGTATGCTTTGGAAGAAGCTTGTACAGTTTGGG
AAGGGGTTTTGATTGATCAAAAAGAAGAATCTACTTCAACCGATATGCCCTTAGGCACGGCCATACATAACATAGAAATCACACTTGGGAAGGGGGGACAATTAGCTAGA
GCAGCAGGTGCTGTAGCGAAACTGATTGCAAAAGAGGGGAAATCGGCCACATTAAAATTACCTTCTGGGGAGGTCCGTTTGATATCCAAAAATTGCTCAGCAACAGTCGG
ACAAGTGGGGAATGCTGGGGTAAACCAGAAAAGTTTGGGTAGAGCCGGATCTAAATGTTGGCTAGGTAAGCGTCCTGTAGTAAGAGGAGTAGTTATGAACCCTGTAGACC
ATCCCCATGGGGGTGGTGAAGGGAGGGCCCCAATTGGTAGAAAAAAACCCGCAACCCCTTGGGGTTATCCTGCACTTGGAAGAAGAAGTAGAAAAAGGAATAAATATAGT
GATAATTTGATTCTTCGTCGCCGTAGTAAATAA
Protein sequenceShow/hide protein sequence
MGPSNKSIGIGSVSMESHHPYITNWCGSTRTEIKHWVELFFGVKVIAMNSHRLPGKGRRMGPIMGHTMHYRRRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVT
IEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLSAISSSTSRKPYALEEACTVWEGVLIDQKEESTSTDMPLGTAIHNIEITLGKGGQLAR
AAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYS
DNLILRRRSK