; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi09G006070 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi09G006070
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionProtein TIC 214
Genome locationchr09:6591652..6593979
RNA-Seq ExpressionLsi09G006070
SyntenyLsi09G006070
Gene Ontology termsGO:0015031 - protein transport (biological process)
GO:0009706 - chloroplast inner membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR008896 - Protein TIC214


Homology Show/hide homology
GenBank top hitse value%identityAlignment
YP_009430686.1 photosystem I assembly protein Ycf1 [Gynostemma cardiospermum]5.0e-38100Show/hide
Query:  GNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVMEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLAL
        GNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVMEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLAL
Subjt:  GNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVMEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLAL

YP_009430686.1 photosystem I assembly protein Ycf1 [Gynostemma cardiospermum]1.8e-1186.67Show/hide
Query:  SVLSNHKKYLQDDSAGADVKKRINKKQYKKNTEAELDFFLKRYFR
        S LSNHK+Y+Q+DSAG DVKKRINKKQYKKNTEAELDF LKRYFR
Subjt:  SVLSNHKKYLQDDSAGADVKKRINKKQYKKNTEAELDFFLKRYFR

YP_009430686.1 photosystem I assembly protein Ycf1 [Gynostemma cardiospermum]5.0e-38100Show/hide
Query:  GNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVMEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLAL
        GNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVMEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLAL
Subjt:  GNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVMEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLAL

YP_009738261.1 Ycf1 [Siraitia siamensis]5.5e-1393.33Show/hide
Query:  SVLSNHKKYLQDDSAGADVKKRINKKQYKKNTEAELDFFLKRYFR
        S LSNHKKY+Q+DSAGADVKKRINKKQYKKNTEAELDFFLKRYFR
Subjt:  SVLSNHKKYLQDDSAGADVKKRINKKQYKKNTEAELDFFLKRYFR

YP_009738261.1 Ycf1 [Siraitia siamensis]5.0e-38100Show/hide
Query:  GNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVMEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLAL
        GNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVMEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLAL
Subjt:  GNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVMEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLAL

YP_009753666.1 Ycf1 protein [Trichosanthes wallichiana]5.0e-38100Show/hide
Query:  GNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVMEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLAL
        GNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVMEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLAL
Subjt:  GNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVMEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLAL

YP_009753666.1 Ycf1 protein [Trichosanthes wallichiana]5.5e-1393.33Show/hide
Query:  SVLSNHKKYLQDDSAGADVKKRINKKQYKKNTEAELDFFLKRYFR
        S LSNHKKY+Q+DSAGADVKKRINKKQYKKNTEAELDFFLKRYFR
Subjt:  SVLSNHKKYLQDDSAGADVKKRINKKQYKKNTEAELDFFLKRYFR

YP_009753666.1 Ycf1 protein [Trichosanthes wallichiana]5.0e-38100Show/hide
Query:  GNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVMEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLAL
        GNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVMEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLAL
Subjt:  GNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVMEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLAL

TrEMBL top hitse value%identityAlignment
A0A1S4EU51 Protein TIC 2142.4e-38100Show/hide
Query:  GNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVMEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLAL
        GNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVMEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLAL
Subjt:  GNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVMEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLAL

A0A1S4EU70 Protein TIC 2142.4e-38100Show/hide
Query:  GNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVMEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLAL
        GNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVMEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLAL
Subjt:  GNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVMEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLAL

A0A1S4EU70 Protein TIC 2143.3e-0358.7Show/hide
Query:  NSVLSNHKKYLQDDSAGADVKKRINKKQYKKNTEAELDFFLKRYFR
        +SV SNHKK LQ+DSA AD +KRIN+ QY K    E +  LK+YFR
Subjt:  NSVLSNHKKYLQDDSAGADVKKRINKKQYKKNTEAELDFFLKRYFR

A0A1S4EU70 Protein TIC 2142.4e-38100Show/hide
Query:  GNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVMEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLAL
        GNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVMEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLAL
Subjt:  GNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVMEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLAL

A0A6M3S424 Protein TIC 2142.4e-38100Show/hide
Query:  GNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVMEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLAL
        GNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVMEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLAL
Subjt:  GNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVMEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLAL

A0A6M3S424 Protein TIC 2141.7e-1291.11Show/hide
Query:  SVLSNHKKYLQDDSAGADVKKRINKKQYKKNTEAELDFFLKRYFR
        S LSNHKKY+Q+DSAGADVKKRINKKQYKKNTEAELDF LKRYFR
Subjt:  SVLSNHKKYLQDDSAGADVKKRINKKQYKKNTEAELDFFLKRYFR

A0A6M3S424 Protein TIC 2142.4e-38100Show/hide
Query:  GNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVMEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLAL
        GNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVMEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLAL
Subjt:  GNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVMEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLAL

SwissProt top hitse value%identityAlignment
A0A393 Protein TIC 2146.5e-41100Show/hide
Query:  GNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVMEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLAL
        GNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVMEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLAL
Subjt:  GNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVMEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLAL

A0A393 Protein TIC 2144.5e-0252.5Show/hide
Query:  SNHKKYLQDDSAGADVKKRINKKQYKKNTEAELDFFLKRY
        +  +K  ++D A + +K    KKQYK  TEAELDFFLKRY
Subjt:  SNHKKYLQDDSAGADVKKRINKKQYKKNTEAELDFFLKRY

A6MM95 Protein TIC 2141.4e-4098.85Show/hide
Query:  GNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVMEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLAL
        GNL+SLCMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVMEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLAL
Subjt:  GNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVMEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLAL

A6MM95 Protein TIC 2145.7e-0559.52Show/hide
Query:  VLSNHKKYLQDDSAGADVKKRINKKQYKKNTEAELDFFLKRY
        VLSN +K +++D AG+++KKR  KKQ   NTEAEL+F LKRY
Subjt:  VLSNHKKYLQDDSAGADVKKRINKKQYKKNTEAELDFFLKRY

Q2MIC9 Protein TIC 2144.2e-4098.85Show/hide
Query:  GNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVMEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLAL
        GNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRA VMEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLAL
Subjt:  GNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVMEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLAL

Q2MIC9 Protein TIC 2144.4e-0561.9Show/hide
Query:  VLSNHKKYLQDDSAGADVKKRINKKQYKKNTEAELDFFLKRY
        V S H+  L+ D   +D KK  NKKQYK NTEAELD FLKRY
Subjt:  VLSNHKKYLQDDSAGADVKKRINKKQYKKNTEAELDFFLKRY

Q33BW4 Protein TIC 2144.2e-4098.85Show/hide
Query:  GNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVMEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLAL
        GNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRA VMEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLAL
Subjt:  GNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVMEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLAL

Q33BW4 Protein TIC 2145.7e-0561.9Show/hide
Query:  VLSNHKKYLQDDSAGADVKKRINKKQYKKNTEAELDFFLKRY
        VLS H+  L+ D   +D KK   KKQYK NTEAELD FLKRY
Subjt:  VLSNHKKYLQDDSAGADVKKRINKKQYKKNTEAELDFFLKRY

Q3C1P6 Protein TIC 2144.2e-4098.85Show/hide
Query:  GNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVMEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLAL
        GNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRA VMEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLAL
Subjt:  GNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVMEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLAL

Q3C1P6 Protein TIC 2142.0e-0564.29Show/hide
Query:  VLSNHKKYLQDDSAGADVKKRINKKQYKKNTEAELDFFLKRY
        VLS H+  L+ D A +D KK   KKQYK NTEAELD FLKRY
Subjt:  VLSNHKKYLQDDSAGADVKKRINKKQYKKNTEAELDFFLKRY

Arabidopsis top hitse value%identityAlignment
AT2G07739.1 Ycf1 protein1.8e-3893.33Show/hide
Query:  GNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVM---EEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLAL
        GNLV LCMKIINSVVVVGLYYGFLTTFSIGP YLFLLRARVM   EEGTEKKVSATTGFI GQLMMFISIYYAPLHLALGRPHTITVLAL
Subjt:  GNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVM---EEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLAL

ATCG01000.1 Ycf1 protein7.4e-4095.56Show/hide
Query:  GNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVM---EEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLAL
        GNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVM   EEGTEKKVSATTGFI GQLMMFISIYYAPLHLALGRPHTITVLAL
Subjt:  GNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVM---EEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLAL

ATCG01130.1 Ycf1 protein7.4e-4095.56Show/hide
Query:  GNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVM---EEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLAL
        GNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVM   EEGTEKKVSATTGFI GQLMMFISIYYAPLHLALGRPHTITVLAL
Subjt:  GNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVM---EEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLAL

ATCG01130.1 Ycf1 protein9.1e-0658.54Show/hide
Query:  NHKKYLQDDSAGADVKKRINKKQYKKNTEAELDFFLKRYFR
        N +K ++++ A + +KKR NKKQYK NTEAELD FL RY R
Subjt:  NHKKYLQDDSAGADVKKRINKKQYKKNTEAELDFFLKRYFR

ATMG00370.1 Ycf1 protein3.7e-3994.44Show/hide
Query:  GNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVM---EEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLAL
        GNLV LCMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVM   EEGTEKKVSATTGFI GQLMMFISIYYAPLHLALGRPHTITVLAL
Subjt:  GNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVM---EEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLAL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGACTTATATTGCATTTTAATGTGTCTCACAATTCGAAAGAATTAGGGGAGGAGGTTCAAGAGATAAGAGAATTAAGGATACCCACCAGAAAGACTAATCCAATCCA
TAATGATGTACCGGAAAATACAACATTTTTGTTACCCGACCAACCATCAGGAGAAGCAAATACAACGGGCACACTAATCAGTAAGATTGATGAAGTAACAATTAATGCAA
AAACAGCCAATTGGAAAGCAATAGTCGATACAGAGCCAATTCCAATAGACTTATTAGAGGGTCCCATTGGCGTGCATCCAGTAGGAATTGAACCTACGAATTCGCCAATT
ATGAGTTGGTTCAAGTCCCTCTATCCCCAAAACCCTAAAAAGGCCCCAATTCACATTATGTTTCTCATTCATTCGACTCTTTCACAAGCGTATTTGAGTGGAAATTTGAT
TTCTTATCACAAGGCTTGTGGTAATCTAGTATCCTTATGCATGAAGATAATCAATTCGGTCGTTGTGGTCGGACTCTATTATGGATTTCTGACCACATTCTCCATAGGGC
CCTCTTATCTCTTCCTTCTCCGAGCTCGGGTTATGGAAGAAGGAACCGAGAAGAAAGTATCAGCAACAACAGGTTTTATTACGGGACAGCTCATGATGTTCATATCGATC
TATTATGCGCCTCTGCATCTAGCATTGGGTAGACCTCATACAATAACTGTCCTAGCTCTACTCATTATAAACATTATTATTACTCTTACTCCCGTCGGGATAAATCTGAC
CCCTTCCCCTGTTCCCGCCTACAACTCAGTTCTCTCAAACCACAAAAAATATCTTCAAGACGATTCTGCGGGAGCAGATGTGAAAAAACGTATAAATAAAAAGCAATACA
AGAAAAACACGGAAGCGGAGCTTGATTTCTTCCTAAAAAGATATTTTCGGCAGGGACGAAAGTCGGCCTTAGTGATCCGACGGTGCCGAGTGGAAGGGCCGTCGCTCAAC
GGATAA
mRNA sequenceShow/hide mRNA sequence
ATGGGACTTATATTGCATTTTAATGTGTCTCACAATTCGAAAGAATTAGGGGAGGAGGTTCAAGAGATAAGAGAATTAAGGATACCCACCAGAAAGACTAATCCAATCCA
TAATGATGTACCGGAAAATACAACATTTTTGTTACCCGACCAACCATCAGGAGAAGCAAATACAACGGGCACACTAATCAGTAAGATTGATGAAGTAACAATTAATGCAA
AAACAGCCAATTGGAAAGCAATAGTCGATACAGAGCCAATTCCAATAGACTTATTAGAGGGTCCCATTGGCGTGCATCCAGTAGGAATTGAACCTACGAATTCGCCAATT
ATGAGTTGGTTCAAGTCCCTCTATCCCCAAAACCCTAAAAAGGCCCCAATTCACATTATGTTTCTCATTCATTCGACTCTTTCACAAGCGTATTTGAGTGGAAATTTGAT
TTCTTATCACAAGGCTTGTGGTAATCTAGTATCCTTATGCATGAAGATAATCAATTCGGTCGTTGTGGTCGGACTCTATTATGGATTTCTGACCACATTCTCCATAGGGC
CCTCTTATCTCTTCCTTCTCCGAGCTCGGGTTATGGAAGAAGGAACCGAGAAGAAAGTATCAGCAACAACAGGTTTTATTACGGGACAGCTCATGATGTTCATATCGATC
TATTATGCGCCTCTGCATCTAGCATTGGGTAGACCTCATACAATAACTGTCCTAGCTCTACTCATTATAAACATTATTATTACTCTTACTCCCGTCGGGATAAATCTGAC
CCCTTCCCCTGTTCCCGCCTACAACTCAGTTCTCTCAAACCACAAAAAATATCTTCAAGACGATTCTGCGGGAGCAGATGTGAAAAAACGTATAAATAAAAAGCAATACA
AGAAAAACACGGAAGCGGAGCTTGATTTCTTCCTAAAAAGATATTTTCGGCAGGGACGAAAGTCGGCCTTAGTGATCCGACGGTGCCGAGTGGAAGGGCCGTCGCTCAAC
GGATAA
Protein sequenceShow/hide protein sequence
MGLILHFNVSHNSKELGEEVQEIRELRIPTRKTNPIHNDVPENTTFLLPDQPSGEANTTGTLISKIDEVTINAKTANWKAIVDTEPIPIDLLEGPIGVHPVGIEPTNSPI
MSWFKSLYPQNPKKAPIHIMFLIHSTLSQAYLSGNLISYHKACGNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRARVMEEGTEKKVSATTGFITGQLMMFISI
YYAPLHLALGRPHTITVLALLIINIIITLTPVGINLTPSPVPAYNSVLSNHKKYLQDDSAGADVKKRINKKQYKKNTEAELDFFLKRYFRQGRKSALVIRRCRVEGPSLN
G