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Lsi09G006080 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi09G006080
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionCLAVATA3/ESR (CLE)-related protein 12
Genome locationchr09:6606696..6607527
RNA-Seq ExpressionLsi09G006080
SyntenyLsi09G006080
Gene Ontology termsGO:0110165 - cellular anatomical structure (cellular component)
InterPro domainsIPR039618 - CLAVATA3/ESR (CLE)-related protein 9/10/11/12/13


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6601759.1 CLAVATA3/ESR (CLE)-related protein 12, partial [Cucurbita argyrosperma subsp. sororia]3.2e-1668.35Show/hide
Query:  MNHKPTPIITFSYSSSSSSNHPLITRKVLTSKVDFTPFFPQRRPNRPPKHSRPTDTNDQPSPA--DIDPRYGVEKRRVP
        MN K  P ITFSY  SSSSNHPL TRK L SKVDFTPFFP  +PNRP KHSRP    + P  A  D+DP YGVEKRRVP
Subjt:  MNHKPTPIITFSYSSSSSSNHPLITRKVLTSKVDFTPFFPQRRPNRPPKHSRPTDTNDQPSPA--DIDPRYGVEKRRVP

KAG7032483.1 CLAVATA3/ESR (CLE)-related protein 12, partial [Cucurbita argyrosperma subsp. argyrosperma]3.2e-1668.35Show/hide
Query:  MNHKPTPIITFSYSSSSSSNHPLITRKVLTSKVDFTPFFPQRRPNRPPKHSRPTDTNDQPSPA--DIDPRYGVEKRRVP
        MN K  P ITFSY  SSSSNHPL TRK L SKVDFTPFFP  +PNRP KHSRP    + P  A  D+DP YGVEKRRVP
Subjt:  MNHKPTPIITFSYSSSSSSNHPLITRKVLTSKVDFTPFFPQRRPNRPPKHSRPTDTNDQPSPA--DIDPRYGVEKRRVP

RVW45565.1 CLAVATA3/ESR (CLE)-related protein 12 [Vitis vinifera]2.1e-0757.75Show/hide
Query:  YSSSSSSNHPLITRKVLTSKVDFTPFFPQR---RPNRPPKHSRPTDTNDQPSPA--DIDPRYGVEKRRVPT
        YSSSS S  P I+RKVL+SK DFTPF  QR   R +   +H R  +   QP PA  +IDPRYGVEKR VPT
Subjt:  YSSSSSSNHPLITRKVLTSKVDFTPFFPQR---RPNRPPKHSRPTDTNDQPSPA--DIDPRYGVEKRRVPT

RVW65127.1 CLAVATA3/ESR (CLE)-related protein 13 [Vitis vinifera]9.3e-0855.42Show/hide
Query:  NHKPTPIITFSYSSSSS-SNHPLITRKVLTSKVDFTPFFPQR---RPNRPPKHSRPTDTNDQPSPA--DIDPRYGVEKRRVPT
        N KP  I  +S SSSSS S  P I+RKVL+SK DFTPF  QR   R +   +H R  +   QP PA  +IDPRYGVEKR VPT
Subjt:  NHKPTPIITFSYSSSSS-SNHPLITRKVLTSKVDFTPFFPQR---RPNRPPKHSRPTDTNDQPSPA--DIDPRYGVEKRRVPT

XP_010648002.1 PREDICTED: CLAVATA3/ESR (CLE)-related protein 12 [Vitis vinifera]2.1e-0757.75Show/hide
Query:  YSSSSSSNHPLITRKVLTSKVDFTPFFPQR---RPNRPPKHSRPTDTNDQPSPA--DIDPRYGVEKRRVPT
        YSSSS S  P I+RKVL+SK DFTPF  QR   R +   +H R  +   QP PA  +IDPRYGVEKR VPT
Subjt:  YSSSSSSNHPLITRKVLTSKVDFTPFFPQR---RPNRPPKHSRPTDTNDQPSPA--DIDPRYGVEKRRVPT

TrEMBL top hitse value%identityAlignment
A0A0A0KPQ3 Uncharacterized protein6.3e-2681.25Show/hide
Query:  MNHKPTPIITFSYSSSSSSNHPLITRKVLTSKVDFTPFFPQRRPNRPPKHSRPTDTN--DQPSPADIDPRYGVEKRRVPT
        MNH+PTP ITFSY  SSSSNHPLITRKVLTSKVDFTPFF  R PN+P KHS PTDTN  D+P+P+DIDPRYGVEKRRVPT
Subjt:  MNHKPTPIITFSYSSSSSSNHPLITRKVLTSKVDFTPFFPQRRPNRPPKHSRPTDTN--DQPSPADIDPRYGVEKRRVPT

A0A2N9J7P0 Uncharacterized protein3.1e-0959.21Show/hide
Query:  IITFSYSSSSSSNHPLITRKVLTSKVDFTPFFP--QRRPNRPPKHS-RPTDTNDQPSPA--DIDPRYGVEKRRVPT
        I T +YSS S  +HPLITRKVL SK DFTPF    Q+R  +   HS R  + + QP PA  +IDPRYGVEKRRVPT
Subjt:  IITFSYSSSSSSNHPLITRKVLTSKVDFTPFFP--QRRPNRPPKHS-RPTDTNDQPSPA--DIDPRYGVEKRRVPT

A0A438ECN4 CLAVATA3/ESR (CLE)-related protein 121.0e-0757.75Show/hide
Query:  YSSSSSSNHPLITRKVLTSKVDFTPFFPQR---RPNRPPKHSRPTDTNDQPSPA--DIDPRYGVEKRRVPT
        YSSSS S  P I+RKVL+SK DFTPF  QR   R +   +H R  +   QP PA  +IDPRYGVEKR VPT
Subjt:  YSSSSSSNHPLITRKVLTSKVDFTPFFPQR---RPNRPPKHSRPTDTNDQPSPA--DIDPRYGVEKRRVPT

A0A438FYU5 CLAVATA3/ESR (CLE)-related protein 134.5e-0855.42Show/hide
Query:  NHKPTPIITFSYSSSSS-SNHPLITRKVLTSKVDFTPFFPQR---RPNRPPKHSRPTDTNDQPSPA--DIDPRYGVEKRRVPT
        N KP  I  +S SSSSS S  P I+RKVL+SK DFTPF  QR   R +   +H R  +   QP PA  +IDPRYGVEKR VPT
Subjt:  NHKPTPIITFSYSSSSS-SNHPLITRKVLTSKVDFTPFFPQR---RPNRPPKHSRPTDTNDQPSPA--DIDPRYGVEKRRVPT

A5B735 Uncharacterized protein1.0e-0757.75Show/hide
Query:  YSSSSSSNHPLITRKVLTSKVDFTPFFPQR---RPNRPPKHSRPTDTNDQPSPA--DIDPRYGVEKRRVPT
        YSSSS S  P I+RKVL+SK DFTPF  QR   R +   +H R  +   QP PA  +IDPRYGVEKR VPT
Subjt:  YSSSSSSNHPLITRKVLTSKVDFTPFFPQR---RPNRPPKHSRPTDTNDQPSPA--DIDPRYGVEKRRVPT

SwissProt top hitse value%identityAlignment
Q29PU4 CLAVATA3/ESR (CLE)-related protein 123.8e-0445.76Show/hide
Query:  NHPLITRKVLTSKVDFTPFFPQRRPNRPPKHSRPTDTNDQPSPADIDPRYGVEKRRVPT
        ++ L++RKVL+ + DFTPF    R N    H     + +Q    +IDPRYGVEKRRVP+
Subjt:  NHPLITRKVLTSKVDFTPFFPQRRPNRPPKHSRPTDTNDQPSPADIDPRYGVEKRRVPT

Arabidopsis top hitse value%identityAlignment
AT1G68795.1 CLAVATA3/ESR-RELATED 122.7e-0545.76Show/hide
Query:  NHPLITRKVLTSKVDFTPFFPQRRPNRPPKHSRPTDTNDQPSPADIDPRYGVEKRRVPT
        ++ L++RKVL+ + DFTPF    R N    H     + +Q    +IDPRYGVEKRRVP+
Subjt:  NHPLITRKVLTSKVDFTPFFPQRRPNRPPKHSRPTDTNDQPSPADIDPRYGVEKRRVPT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATCACAAACCAACACCAATCATCACATTTTCCTATTCTTCTTCTTCCTCCTCCAACCATCCATTGATAACAAGGAAGGTACTAACCAGCAAGGTAGACTTCACCCC
CTTTTTCCCACAGCGCCGGCCGAATCGACCACCGAAGCATTCTCGCCCCACCGACACCAACGACCAACCATCCCCCGCCGACATCGATCCTCGGTACGGCGTTGAGAAGC
GACGAGTCCCTACCGTGCAAGTGATGCGTTTGGTACCCACCGGCCCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGAATCACAAACCAACACCAATCATCACATTTTCCTATTCTTCTTCTTCCTCCTCCAACCATCCATTGATAACAAGGAAGGTACTAACCAGCAAGGTAGACTTCACCCC
CTTTTTCCCACAGCGCCGGCCGAATCGACCACCGAAGCATTCTCGCCCCACCGACACCAACGACCAACCATCCCCCGCCGACATCGATCCTCGGTACGGCGTTGAGAAGC
GACGAGTCCCTACCGTGCAAGTGATGCGTTTGGTACCCACCGGCCCTTAG
Protein sequenceShow/hide protein sequence
MNHKPTPIITFSYSSSSSSNHPLITRKVLTSKVDFTPFFPQRRPNRPPKHSRPTDTNDQPSPADIDPRYGVEKRRVPTVQVMRLVPTGP