; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi09G006140 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi09G006140
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionNudix hydrolase
Genome locationchr09:6700069..6701080
RNA-Seq ExpressionLsi09G006140
SyntenyLsi09G006140
Gene Ontology termsGO:0006203 - dGTP catabolic process (biological process)
GO:0006974 - cellular response to DNA damage stimulus (biological process)
GO:0005829 - cytosol (cellular component)
GO:0008413 - 8-oxo-7,8-dihydroguanosine triphosphate pyrophosphatase activity (molecular function)
GO:0019177 - dihydroneopterin triphosphate pyrophosphohydrolase activity (molecular function)
GO:0035539 - 8-oxo-7,8-dihydrodeoxyguanosine triphosphate pyrophosphatase activity (molecular function)
InterPro domainsIPR000086 - NUDIX hydrolase domain
IPR015797 - NUDIX hydrolase-like domain superfamily
IPR020084 - NUDIX hydrolase, conserved site
IPR020476 - NUDIX hydrolase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6601762.1 Nudix hydrolase 1, partial [Cucurbita argyrosperma subsp. sororia]2.4e-7286.09Show/hide
Query:  MEKSTAETATPVPRVAVVVYILKGNSVLLGRRLSSVGDSGHSTFALPGGHLEFGEAFDECAVREVKEETGLDIEKTEFLTVTNNPFLNDPKPSHYVTIFM
        ME      A PVPRV VVVYILKG SVLLGRRLSS GDS H+TFALPGGHLEFGE+F+EC VREVKEETGLDIEKTEFLTVTNNPF+NDPKPSHYV IFM
Subjt:  MEKSTAETATPVPRVAVVVYILKGNSVLLGRRLSSVGDSGHSTFALPGGHLEFGEAFDECAVREVKEETGLDIEKTEFLTVTNNPFLNDPKPSHYVTIFM

Query:  RAVLSDPLQLPQNLEPSKCGGWDWYDWDHLPNPLFWPLEKMVKSGFNPFPL
        RAVLSDPLQ PQNLEPSKCGGWDWYDWD LP+PLFWPLEKMVKSGFNPFP+
Subjt:  RAVLSDPLQLPQNLEPSKCGGWDWYDWDHLPNPLFWPLEKMVKSGFNPFPL

XP_004147111.1 nudix hydrolase 1 [Cucumis sativus]6.3e-7385.43Show/hide
Query:  MEKSTAETATPVPRVAVVVYILKGNSVLLGRRLSSVGDSGHSTFALPGGHLEFGEAFDECAVREVKEETGLDIEKTEFLTVTNNPFLNDPKPSHYVTIFM
        M+KSTAE A PVPRVAVVVYILKG SVL+GRRLSS GDS H TFALPGGHLEFGE F+ECAVREVKEETGLDIEKTEFLTVTN PFLNDPKPSHYVTI M
Subjt:  MEKSTAETATPVPRVAVVVYILKGNSVLLGRRLSSVGDSGHSTFALPGGHLEFGEAFDECAVREVKEETGLDIEKTEFLTVTNNPFLNDPKPSHYVTIFM

Query:  RAVLSDPLQLPQNLEPSKCGGWDWYDWDHLPNPLFWPLEKMVKSGFNPFPL
        RAVLSDP Q+P+NLEP+KC GWDWYDWDHLPNPLFWP++KM++SGFNPFP+
Subjt:  RAVLSDPLQLPQNLEPSKCGGWDWYDWDHLPNPLFWPLEKMVKSGFNPFPL

XP_008467199.1 PREDICTED: nudix hydrolase 1-like [Cucumis melo]2.3e-7588.74Show/hide
Query:  MEKSTAETATPVPRVAVVVYILKGNSVLLGRRLSSVGDSGHSTFALPGGHLEFGEAFDECAVREVKEETGLDIEKTEFLTVTNNPFLNDPKPSHYVTIFM
        MEK TAETA PVPRVAVVVYILKG SVL+GRRLSS GDSGH TFALPGGHLEFGE+F+ECAVREVKEETGLDIEKTEFLTVTN PFLNDPKPSHYVTI M
Subjt:  MEKSTAETATPVPRVAVVVYILKGNSVLLGRRLSSVGDSGHSTFALPGGHLEFGEAFDECAVREVKEETGLDIEKTEFLTVTNNPFLNDPKPSHYVTIFM

Query:  RAVLSDPLQLPQNLEPSKCGGWDWYDWDHLPNPLFWPLEKMVKSGFNPFPL
        RAVLSDP Q+PQNLEP+KC GWDWYDWDHLPNPLFWP+EKMV+SGFNPFP+
Subjt:  RAVLSDPLQLPQNLEPSKCGGWDWYDWDHLPNPLFWPLEKMVKSGFNPFPL

XP_022156539.1 nudix hydrolase 1-like [Momordica charantia]1.4e-7590.07Show/hide
Query:  MEKSTAETATPVPRVAVVVYILKGNSVLLGRRLSSVGDSGHSTFALPGGHLEFGEAFDECAVREVKEETGLDIEKTEFLTVTNNPFLNDPKPSHYVTIFM
        MEK+T+ T  PVPRVAVVVYILKGNSVLLGRRLSS GDS HSTFALPGGHLEFGEAFDECAVREVKEETGLDIEKTEFLTVTNNPFLNDPKPSHYVTIFM
Subjt:  MEKSTAETATPVPRVAVVVYILKGNSVLLGRRLSSVGDSGHSTFALPGGHLEFGEAFDECAVREVKEETGLDIEKTEFLTVTNNPFLNDPKPSHYVTIFM

Query:  RAVLSDPLQLPQNLEPSKCGGWDWYDWDHLPNPLFWPLEKMVKSGFNPFPL
        RA LSD  Q PQNLEPSKCGGWDWYDW HLPNPLFWPL+KMV+SGFNPFP+
Subjt:  RAVLSDPLQLPQNLEPSKCGGWDWYDWDHLPNPLFWPLEKMVKSGFNPFPL

XP_038875644.1 nudix hydrolase 1-like [Benincasa hispida]2.8e-8196.03Show/hide
Query:  MEKSTAETATPVPRVAVVVYILKGNSVLLGRRLSSVGDSGHSTFALPGGHLEFGEAFDECAVREVKEETGLDIEKTEFLTVTNNPFLNDPKPSHYVTIFM
        MEKS A+TA PVPRVAVVVYILKGNSVLLGRRLSS GDS HSTFALPGGHLEFGEAFDECAVREVKEETGLDIEKTEFLTVTNNPFLNDPKPSHYVTIFM
Subjt:  MEKSTAETATPVPRVAVVVYILKGNSVLLGRRLSSVGDSGHSTFALPGGHLEFGEAFDECAVREVKEETGLDIEKTEFLTVTNNPFLNDPKPSHYVTIFM

Query:  RAVLSDPLQLPQNLEPSKCGGWDWYDWDHLPNPLFWPLEKMVKSGFNPFPL
        RAVLSDPLQLPQNLEPSKCGGWDWYDWDHLPNPLFWPLEKMVKSGFNPFP+
Subjt:  RAVLSDPLQLPQNLEPSKCGGWDWYDWDHLPNPLFWPLEKMVKSGFNPFPL

TrEMBL top hitse value%identityAlignment
A0A0A0KV11 Nudix hydrolase domain-containing protein3.0e-7385.43Show/hide
Query:  MEKSTAETATPVPRVAVVVYILKGNSVLLGRRLSSVGDSGHSTFALPGGHLEFGEAFDECAVREVKEETGLDIEKTEFLTVTNNPFLNDPKPSHYVTIFM
        M+KSTAE A PVPRVAVVVYILKG SVL+GRRLSS GDS H TFALPGGHLEFGE F+ECAVREVKEETGLDIEKTEFLTVTN PFLNDPKPSHYVTI M
Subjt:  MEKSTAETATPVPRVAVVVYILKGNSVLLGRRLSSVGDSGHSTFALPGGHLEFGEAFDECAVREVKEETGLDIEKTEFLTVTNNPFLNDPKPSHYVTIFM

Query:  RAVLSDPLQLPQNLEPSKCGGWDWYDWDHLPNPLFWPLEKMVKSGFNPFPL
        RAVLSDP Q+P+NLEP+KC GWDWYDWDHLPNPLFWP++KM++SGFNPFP+
Subjt:  RAVLSDPLQLPQNLEPSKCGGWDWYDWDHLPNPLFWPLEKMVKSGFNPFPL

A0A1S3CT01 nudix hydrolase 1-like1.1e-7588.74Show/hide
Query:  MEKSTAETATPVPRVAVVVYILKGNSVLLGRRLSSVGDSGHSTFALPGGHLEFGEAFDECAVREVKEETGLDIEKTEFLTVTNNPFLNDPKPSHYVTIFM
        MEK TAETA PVPRVAVVVYILKG SVL+GRRLSS GDSGH TFALPGGHLEFGE+F+ECAVREVKEETGLDIEKTEFLTVTN PFLNDPKPSHYVTI M
Subjt:  MEKSTAETATPVPRVAVVVYILKGNSVLLGRRLSSVGDSGHSTFALPGGHLEFGEAFDECAVREVKEETGLDIEKTEFLTVTNNPFLNDPKPSHYVTIFM

Query:  RAVLSDPLQLPQNLEPSKCGGWDWYDWDHLPNPLFWPLEKMVKSGFNPFPL
        RAVLSDP Q+PQNLEP+KC GWDWYDWDHLPNPLFWP+EKMV+SGFNPFP+
Subjt:  RAVLSDPLQLPQNLEPSKCGGWDWYDWDHLPNPLFWPLEKMVKSGFNPFPL

A0A5D3BLX3 Nudix hydrolase 1-like1.1e-7588.74Show/hide
Query:  MEKSTAETATPVPRVAVVVYILKGNSVLLGRRLSSVGDSGHSTFALPGGHLEFGEAFDECAVREVKEETGLDIEKTEFLTVTNNPFLNDPKPSHYVTIFM
        MEK TAETA PVPRVAVVVYILKG SVL+GRRLSS GDSGH TFALPGGHLEFGE+F+ECAVREVKEETGLDIEKTEFLTVTN PFLNDPKPSHYVTI M
Subjt:  MEKSTAETATPVPRVAVVVYILKGNSVLLGRRLSSVGDSGHSTFALPGGHLEFGEAFDECAVREVKEETGLDIEKTEFLTVTNNPFLNDPKPSHYVTIFM

Query:  RAVLSDPLQLPQNLEPSKCGGWDWYDWDHLPNPLFWPLEKMVKSGFNPFPL
        RAVLSDP Q+PQNLEP+KC GWDWYDWDHLPNPLFWP+EKMV+SGFNPFP+
Subjt:  RAVLSDPLQLPQNLEPSKCGGWDWYDWDHLPNPLFWPLEKMVKSGFNPFPL

A0A6J1DTS6 nudix hydrolase 1-like6.6e-7690.07Show/hide
Query:  MEKSTAETATPVPRVAVVVYILKGNSVLLGRRLSSVGDSGHSTFALPGGHLEFGEAFDECAVREVKEETGLDIEKTEFLTVTNNPFLNDPKPSHYVTIFM
        MEK+T+ T  PVPRVAVVVYILKGNSVLLGRRLSS GDS HSTFALPGGHLEFGEAFDECAVREVKEETGLDIEKTEFLTVTNNPFLNDPKPSHYVTIFM
Subjt:  MEKSTAETATPVPRVAVVVYILKGNSVLLGRRLSSVGDSGHSTFALPGGHLEFGEAFDECAVREVKEETGLDIEKTEFLTVTNNPFLNDPKPSHYVTIFM

Query:  RAVLSDPLQLPQNLEPSKCGGWDWYDWDHLPNPLFWPLEKMVKSGFNPFPL
        RA LSD  Q PQNLEPSKCGGWDWYDW HLPNPLFWPL+KMV+SGFNPFP+
Subjt:  RAVLSDPLQLPQNLEPSKCGGWDWYDWDHLPNPLFWPLEKMVKSGFNPFPL

A0A6J1I9N4 nudix hydrolase 1-like1.5e-7290.14Show/hide
Query:  TPVPRVAVVVYILKGNSVLLGRRLSSVGDSGHSTFALPGGHLEFGEAFDECAVREVKEETGLDIEKTEFLTVTNNPFLNDPKPSHYVTIFMRAVLSDPLQ
        TPVPRV V VYILKGNSVLLGRRLSS GDS H+TFALPGGHLEFGE+FDEC VREVKEETGLDIEKTEFLTVTNNPF+NDPKPSHYV IFMRAVLSDPLQ
Subjt:  TPVPRVAVVVYILKGNSVLLGRRLSSVGDSGHSTFALPGGHLEFGEAFDECAVREVKEETGLDIEKTEFLTVTNNPFLNDPKPSHYVTIFMRAVLSDPLQ

Query:  LPQNLEPSKCGGWDWYDWDHLPNPLFWPLEKMVKSGFNPFPL
         PQNLEPSKCGGWDWYDWD LP+PLFWPLEKM+KSGFNPFP+
Subjt:  LPQNLEPSKCGGWDWYDWDHLPNPLFWPLEKMVKSGFNPFPL

SwissProt top hitse value%identityAlignment
M4I1C6 Geranyl diphosphate phosphohydrolase2.9e-5266.9Show/hide
Query:  AETATPVPRVAVVVYILKGNSVLLGRRLSSVGDSGHSTFALPGGHLEFGEAFDECAVREVKEETGLDIEKTEFLTVTNNPFLNDPKPSHYVTIFMRAVLS
        AETA  + +VAVVV +L+G +VLLGRR SS+GD   STF+LP GHLEFGE+F+ECA RE+KEET LDI K E LTVTNN FL++ KPS YV +FMRAVL+
Subjt:  AETATPVPRVAVVVYILKGNSVLLGRRLSSVGDSGHSTFALPGGHLEFGEAFDECAVREVKEETGLDIEKTEFLTVTNNPFLNDPKPSHYVTIFMRAVLS

Query:  DPLQLPQNLEPSKCGGWDWYDWDHLPNPLFWPLEKMVKSGFNPFP
        DP Q PQN+EP  C GW WY+WD+LP PLFWPL+ +V+ GFNPFP
Subjt:  DPLQLPQNLEPSKCGGWDWYDWDHLPNPLFWPLEKMVKSGFNPFP

Q58549 ADP-ribose pyrophosphatase3.3e-0833.59Show/hide
Query:  PRVAVVVYILKGNSVLLGRRLSSVGDSGHSTFALPGGHLEFGEAFDECAVREVKEETGLDIEKTEFLTVTNNPFLNDPKPSHYVTIFMRAVLSDPLQLPQ
        P VAV   I K N +LL +R +   +     FALPGG +E GE  +E  VRE+KEETGL  +    L V ++P   DP+      +F+  V+   L+   
Subjt:  PRVAVVVYILKGNSVLLGRRLSSVGDSGHSTFALPGGHLEFGEAFDECAVREVKEETGLDIEKTEFLTVTNNPFLNDPKPSHYVTIFMRAVLSDPLQLPQ

Query:  NLEPSKCGGWDWYDWDHLPNPLFWPLEKMVK
        + + +     +++D ++LP  L +  EK++K
Subjt:  NLEPSKCGGWDWYDWDHLPNPLFWPLEKMVK

Q8BG93 Nucleotide triphosphate diphosphatase NUDT152.2e-2039.86Show/hide
Query:  PRVAVVVYILK---GNSVLLGRRLSSVGDSGHSTFALPGGHLEFGEAFDECAVREVKEETGLDIEKTEFLTVTNNPFLNDPKPSHYVTIFMRAVLSDPLQ
        P V V V +L       VLLG+R    G  G  +F LPGGHLEFGE ++ECA RE  EE GL ++   F +V N+    + +  HYVTI M+  +     
Subjt:  PRVAVVVYILK---GNSVLLGRRLSSVGDSGHSTFALPGGHLEFGEAFDECAVREVKEETGLDIEKTEFLTVTNNPFLNDPKPSHYVTIFMRAVLSDPLQ

Query:  L-PQNLEPSKCGGWDWYDWDHLP--NPLFWPLEKMVKSGFNPF
          P+N+EP K   W+W  W+  P  + LFW L  + + G++PF
Subjt:  L-PQNLEPSKCGGWDWYDWDHLP--NPLFWPLEKMVKSGFNPF

Q9CA40 Nudix hydrolase 16.1e-5569.72Show/hide
Query:  TATPVPRVAVVVYILKGNSVLLGRRLSSVGDSGHSTFALPGGHLEFGEAFDECAVREVKEETGLDIEKTEFLTVTNNPFLNDPKPSHYVTIFMRAVLSDP
        T   +PRVAVVV+IL GNS+LLGRR SS+   G+STFALPGGHLEFGE+F+ECA REV EETGL IEK + LTVTNN F   P PSHYV++ +RAVL DP
Subjt:  TATPVPRVAVVVYILKGNSVLLGRRLSSVGDSGHSTFALPGGHLEFGEAFDECAVREVKEETGLDIEKTEFLTVTNNPFLNDPKPSHYVTIFMRAVLSDP

Query:  LQLPQNLEPSKCGGWDWYDWDHLPNPLFWPLEKMVKSGFNPF
         Q P+N+EP KC GWDWYDW++LP PLFWPLEK+  SGFNPF
Subjt:  LQLPQNLEPSKCGGWDWYDWDHLPNPLFWPLEKMVKSGFNPF

Q9NV35 Nucleotide triphosphate diphosphatase NUDT151.3e-2041.29Show/hide
Query:  TATPVPR-------VAVVVYILK-GNSVLLGRRLSSVGDSGHSTFALPGGHLEFGEAFDECAVREVKEETGLDIEKTEFLTVTNNPFLNDPKPSHYVTIF
        TA+  PR       V VVV   K    VLLG+R  SV   G  +F LPGGHLEFGE ++ECA RE  EE  L ++   F +V N+    + +  HYVTI 
Subjt:  TATPVPR-------VAVVVYILK-GNSVLLGRRLSSVGDSGHSTFALPGGHLEFGEAFDECAVREVKEETGLDIEKTEFLTVTNNPFLNDPKPSHYVTIF

Query:  MRA---VLSDPLQLPQNLEPSKCGGWDWYDWDHLP--NPLFWPLEKMVKSGFNPF
        M+    V  D    P+N+EP K   W+W  W+ LP  + LFW L  + + G++PF
Subjt:  MRA---VLSDPLQLPQNLEPSKCGGWDWYDWDHLP--NPLFWPLEKMVKSGFNPF

Arabidopsis top hitse value%identityAlignment
AT1G68760.1 nudix hydrolase 14.4e-5669.72Show/hide
Query:  TATPVPRVAVVVYILKGNSVLLGRRLSSVGDSGHSTFALPGGHLEFGEAFDECAVREVKEETGLDIEKTEFLTVTNNPFLNDPKPSHYVTIFMRAVLSDP
        T   +PRVAVVV+IL GNS+LLGRR SS+   G+STFALPGGHLEFGE+F+ECA REV EETGL IEK + LTVTNN F   P PSHYV++ +RAVL DP
Subjt:  TATPVPRVAVVVYILKGNSVLLGRRLSSVGDSGHSTFALPGGHLEFGEAFDECAVREVKEETGLDIEKTEFLTVTNNPFLNDPKPSHYVTIFMRAVLSDP

Query:  LQLPQNLEPSKCGGWDWYDWDHLPNPLFWPLEKMVKSGFNPF
         Q P+N+EP KC GWDWYDW++LP PLFWPLEK+  SGFNPF
Subjt:  LQLPQNLEPSKCGGWDWYDWDHLPNPLFWPLEKMVKSGFNPF

AT5G47650.1 nudix hydrolase homolog 26.0e-0527.42Show/hide
Query:  RVAVVVYILKGNSVLLGRRLSSVGDSGHSTFALPGGHLEFGEAFDECAVREVKEETGLDIEKTEFLTV--TNNPFLNDPKPSHYVTIFMRAVLSDPLQLP
        RV +  +++  N  +L  +  +    G   +  P G +  GE   + +VREVKEETG+D E  + L    T+  F           +F   +L  PL L 
Subjt:  RVAVVVYILKGNSVLLGRRLSSVGDSGHSTFALPGGHLEFGEAFDECAVREVKEETGLDIEKTEFLTV--TNNPFLNDPKPSHYVTIFMRAVLSDPLQLP

Query:  QNLEPSKCGGWDWYDWDHLPNPLF
         N + S+     W  W+   N  F
Subjt:  QNLEPSKCGGWDWYDWDHLPNPLF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAAGAGCACGGCGGAGACGGCAACGCCGGTGCCGAGAGTTGCAGTGGTGGTTTACATTTTGAAAGGGAATTCAGTGCTATTGGGTCGAAGGCTTTCCTCCGTCGG
CGACTCCGGCCACTCCACCTTCGCACTCCCCGGCGGCCACCTGGAGTTCGGCGAGGCGTTTGATGAATGTGCTGTGAGAGAAGTTAAGGAAGAGACAGGGTTAGACATTG
AGAAAACAGAGTTTTTGACTGTCACAAACAACCCTTTTCTGAATGATCCAAAGCCTTCCCATTATGTCACCATTTTTATGCGAGCAGTTTTGTCGGATCCCTTGCAACTT
CCCCAAAATCTGGAGCCAAGCAAGTGCGGCGGCTGGGATTGGTACGATTGGGATCATCTTCCAAACCCTCTGTTTTGGCCTTTGGAGAAGATGGTGAAAAGTGGGTTTAA
TCCATTTCCTCTTTGA
mRNA sequenceShow/hide mRNA sequence
GTCAAAGTGGGACCCACTTTTCCCACCCATAATTAAAAAGGGAAAAAATAAAGCACTCGCCCAGCCATTTTCAAGTCGCCGCCGTAAAAAGGTGGAGGAGATTGAGGCGA
CAGGACTTGTGGAGGCCAAGCCGAGGAGAATGGAGAAGAGCACGGCGGAGACGGCAACGCCGGTGCCGAGAGTTGCAGTGGTGGTTTACATTTTGAAAGGGAATTCAGTG
CTATTGGGTCGAAGGCTTTCCTCCGTCGGCGACTCCGGCCACTCCACCTTCGCACTCCCCGGCGGCCACCTGGAGTTCGGCGAGGCGTTTGATGAATGTGCTGTGAGAGA
AGTTAAGGAAGAGACAGGGTTAGACATTGAGAAAACAGAGTTTTTGACTGTCACAAACAACCCTTTTCTGAATGATCCAAAGCCTTCCCATTATGTCACCATTTTTATGC
GAGCAGTTTTGTCGGATCCCTTGCAACTTCCCCAAAATCTGGAGCCAAGCAAGTGCGGCGGCTGGGATTGGTACGATTGGGATCATCTTCCAAACCCTCTGTTTTGGCCT
TTGGAGAAGATGGTGAAAAGTGGGTTTAATCCATTTCCTCTTTGAGACGATGGTGTAATTGATGAATCTGATGTGTTAATCCCTCTGATGCTTTATCTTTTGTGTTGAGT
TTTAATGCATATATGTTTGCTTGATCAAGAACAATGTTTTGGGAAGCTTATTGAGTGGGATTGTGTAACCTTAATTTGGATAAGTTTTGTTTCAAGTTAGCTCTGTCAGA
ATAGAAATCAAAGGTCATGTACCTTTTTAATTAGTTTCTAAAAGATTTTCAGCTTGAGAAAATCTTCTGATCAAAGTTCATTGGGGAGCTCATTTCTTTATCAAAAATGC
AAATCTCTTGGAGGTTGAGGTTTTGGC
Protein sequenceShow/hide protein sequence
MEKSTAETATPVPRVAVVVYILKGNSVLLGRRLSSVGDSGHSTFALPGGHLEFGEAFDECAVREVKEETGLDIEKTEFLTVTNNPFLNDPKPSHYVTIFMRAVLSDPLQL
PQNLEPSKCGGWDWYDWDHLPNPLFWPLEKMVKSGFNPFPL