; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi09G006510 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi09G006510
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr09:7286823..7287284
RNA-Seq ExpressionLsi09G006510
SyntenyLsi09G006510
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046315.1 uncharacterized protein E6C27_scaffold149G00240 [Cucumis melo var. makuwa]4.4e-5075.16Show/hide
Query:  MKSINSLSISSTNSASFLFPSTSSGHHRRRLPVAGIVRASRE-AADNNNN-------YYASGKVVDESMIVLRKRIHEIKMAEQSHDPPADWFDWEKRYY
        MKSINSLS S   + S LF      H RR+   A  VRASRE AADNNNN       YYA GKVVDESMIVLRKRIHEIKMAEQ  +PPADW DWEKRYY
Subjt:  MKSINSLSISSTNSASFLFPSTSSGHHRRRLPVAGIVRASRE-AADNNNN-------YYASGKVVDESMIVLRKRIHEIKMAEQSHDPPADWFDWEKRYY

Query:  SDYDSHICEALGYLQSHLMNTRPSVALGMLLVITLSVPLSSALLLHHFFQIAVALLAAFHP
        SDYDSHICEALGYLQSHLMNTRPSVALGMLL+I +SVPLSSALLLH FF IAVALLA F P
Subjt:  SDYDSHICEALGYLQSHLMNTRPSVALGMLLVITLSVPLSSALLLHHFFQIAVALLAAFHP

XP_004150478.1 uncharacterized protein LOC101215395 [Cucumis sativus]1.1e-4871.43Show/hide
Query:  MKSINSLSISSTNSASFLFPSTSSGHHRRRLPVAGIVRASREAA--------DNNNNYYASGKVVDESMIVLRKRIHEIKMAEQSHDPPADWFDWEKRYY
        M+SINSLS S+ +    LF   +  H RR+   A  VRASRE A        +NNNNYYA GKVVDESMIVLRKRIHEIKMAEQ  +PPADW DWEKR+Y
Subjt:  MKSINSLSISSTNSASFLFPSTSSGHHRRRLPVAGIVRASREAA--------DNNNNYYASGKVVDESMIVLRKRIHEIKMAEQSHDPPADWFDWEKRYY

Query:  SDYDSHICEALGYLQSHLMNTRPSVALGMLLVITLSVPLSSALLLHHFFQIAVALLAAFHP
        SDYDSHICEALGYLQSHLMNTRPSVALGMLL+I +SVPLSSALLLH F  IAVALLA F P
Subjt:  SDYDSHICEALGYLQSHLMNTRPSVALGMLLVITLSVPLSSALLLHHFFQIAVALLAAFHP

XP_008437695.1 PREDICTED: uncharacterized protein LOC103483039, partial [Cucumis melo]7.1e-4880.15Show/hide
Query:  HRRRLPVAGI-VRASRE-AADNNNN-------YYASGKVVDESMIVLRKRIHEIKMAEQSHDPPADWFDWEKRYYSDYDSHICEALGYLQSHLMNTRPSV
        H RR P+  + VRASRE AADNNNN       YYA GKVVDESMIVLRKRIHEIKMAEQ  +PPADW DWEKRYYSDYDSHICEALGYLQSHLMNTRPSV
Subjt:  HRRRLPVAGI-VRASRE-AADNNNN-------YYASGKVVDESMIVLRKRIHEIKMAEQSHDPPADWFDWEKRYYSDYDSHICEALGYLQSHLMNTRPSV

Query:  ALGMLLVITLSVPLSSALLLHHFFQIAVALLAAFHP
        ALGMLL+I +SVPLSSALLLH FF IAVALLA F P
Subjt:  ALGMLLVITLSVPLSSALLLHHFFQIAVALLAAFHP

XP_022993164.1 uncharacterized protein LOC111489262 [Cucurbita maxima]7.1e-4872.48Show/hide
Query:  SISSTNSASFL--FPSTSSGHHRRRLPVAGIVRASREA-----ADNNNNYYASGKVVDESMIVLRKRIHEIKMAEQSHDPPADWFDWEKRYYSDYDSHIC
        SISS NSA FL   P + S   RRRLP+  ++ +SR A      +NNNNYYASGK+VDESMIVLRKRIHEIKM EQSH+PP+DW DWEKR YSDYDSHIC
Subjt:  SISSTNSASFL--FPSTSSGHHRRRLPVAGIVRASREA-----ADNNNNYYASGKVVDESMIVLRKRIHEIKMAEQSHDPPADWFDWEKRYYSDYDSHIC

Query:  EALGYLQSHLMNTRPSVALGMLLVITLSVPLSSALLLHHFFQIAVALLA
        EALGYLQSHLMNTRPSV+LG+LL+ITLSVPLSSA++LH F  IA ALLA
Subjt:  EALGYLQSHLMNTRPSVALGMLLVITLSVPLSSALLLHHFFQIAVALLA

XP_038875502.1 uncharacterized protein LOC120067929 [Benincasa hispida]5.2e-5984.08Show/hide
Query:  MKSINSL--SISSTNSASFLFPSTSSGHHRRRLPVAGIVRA-SREAAD-NNNNYYASGKVVDESMIVLRKRIHEIKMAEQSHDPPADWFDWEKRYYSDYD
        MKSINSL  SISSTNSA FLFPSTS+ H  RRLP+A  V A SR +AD NNNNYYASGKVVDESMIVLRKRIHEIKMAEQSH+PPADW DWEKRYYSDYD
Subjt:  MKSINSL--SISSTNSASFLFPSTSSGHHRRRLPVAGIVRA-SREAAD-NNNNYYASGKVVDESMIVLRKRIHEIKMAEQSHDPPADWFDWEKRYYSDYD

Query:  SHICEALGYLQSHLMNTRPSVALGMLLVITLSVPLSSALLLHHFFQIAVALLAAFHP
        SHICEALGYLQ+HLMNTRPSVALGMLL+ITLSVP SSA+LLH FFQIA ALLA F P
Subjt:  SHICEALGYLQSHLMNTRPSVALGMLLVITLSVPLSSALLLHHFFQIAVALLAAFHP

TrEMBL top hitse value%identityAlignment
A0A0A0KPI5 Uncharacterized protein5.3e-4971.43Show/hide
Query:  MKSINSLSISSTNSASFLFPSTSSGHHRRRLPVAGIVRASREAA--------DNNNNYYASGKVVDESMIVLRKRIHEIKMAEQSHDPPADWFDWEKRYY
        M+SINSLS S+ +    LF   +  H RR+   A  VRASRE A        +NNNNYYA GKVVDESMIVLRKRIHEIKMAEQ  +PPADW DWEKR+Y
Subjt:  MKSINSLSISSTNSASFLFPSTSSGHHRRRLPVAGIVRASREAA--------DNNNNYYASGKVVDESMIVLRKRIHEIKMAEQSHDPPADWFDWEKRYY

Query:  SDYDSHICEALGYLQSHLMNTRPSVALGMLLVITLSVPLSSALLLHHFFQIAVALLAAFHP
        SDYDSHICEALGYLQSHLMNTRPSVALGMLL+I +SVPLSSALLLH F  IAVALLA F P
Subjt:  SDYDSHICEALGYLQSHLMNTRPSVALGMLLVITLSVPLSSALLLHHFFQIAVALLAAFHP

A0A1S3AV87 uncharacterized protein LOC1034830393.4e-4880.15Show/hide
Query:  HRRRLPVAGI-VRASRE-AADNNNN-------YYASGKVVDESMIVLRKRIHEIKMAEQSHDPPADWFDWEKRYYSDYDSHICEALGYLQSHLMNTRPSV
        H RR P+  + VRASRE AADNNNN       YYA GKVVDESMIVLRKRIHEIKMAEQ  +PPADW DWEKRYYSDYDSHICEALGYLQSHLMNTRPSV
Subjt:  HRRRLPVAGI-VRASRE-AADNNNN-------YYASGKVVDESMIVLRKRIHEIKMAEQSHDPPADWFDWEKRYYSDYDSHICEALGYLQSHLMNTRPSV

Query:  ALGMLLVITLSVPLSSALLLHHFFQIAVALLAAFHP
        ALGMLL+I +SVPLSSALLLH FF IAVALLA F P
Subjt:  ALGMLLVITLSVPLSSALLLHHFFQIAVALLAAFHP

A0A5A7TY46 Uncharacterized protein2.2e-5075.16Show/hide
Query:  MKSINSLSISSTNSASFLFPSTSSGHHRRRLPVAGIVRASRE-AADNNNN-------YYASGKVVDESMIVLRKRIHEIKMAEQSHDPPADWFDWEKRYY
        MKSINSLS S   + S LF      H RR+   A  VRASRE AADNNNN       YYA GKVVDESMIVLRKRIHEIKMAEQ  +PPADW DWEKRYY
Subjt:  MKSINSLSISSTNSASFLFPSTSSGHHRRRLPVAGIVRASRE-AADNNNN-------YYASGKVVDESMIVLRKRIHEIKMAEQSHDPPADWFDWEKRYY

Query:  SDYDSHICEALGYLQSHLMNTRPSVALGMLLVITLSVPLSSALLLHHFFQIAVALLAAFHP
        SDYDSHICEALGYLQSHLMNTRPSVALGMLL+I +SVPLSSALLLH FF IAVALLA F P
Subjt:  SDYDSHICEALGYLQSHLMNTRPSVALGMLLVITLSVPLSSALLLHHFFQIAVALLAAFHP

A0A6J1FMN3 uncharacterized protein LOC1114453384.5e-4873.47Show/hide
Query:  SISSTNSASFL--FPSTSSGHHRRRLPVAGIVRASREA---ADNNNNYYASGKVVDESMIVLRKRIHEIKMAEQSHDPPADWFDWEKRYYSDYDSHICEA
        SISS NSA FL   P +SS   RRR P+  ++ +SR A   + NNNNYYASGK+VDESMIVLRKRIHEIKM E+SH+PP+DW DWEKR YSDYDSHICEA
Subjt:  SISSTNSASFL--FPSTSSGHHRRRLPVAGIVRASREA---ADNNNNYYASGKVVDESMIVLRKRIHEIKMAEQSHDPPADWFDWEKRYYSDYDSHICEA

Query:  LGYLQSHLMNTRPSVALGMLLVITLSVPLSSALLLHHFFQIAVALLA
        LGYLQSHLMNTRPSVALG+LL+ITLSVPLSSA++LH F  IA ALLA
Subjt:  LGYLQSHLMNTRPSVALGMLLVITLSVPLSSALLLHHFFQIAVALLA

A0A6J1JZG1 uncharacterized protein LOC1114892623.4e-4872.48Show/hide
Query:  SISSTNSASFL--FPSTSSGHHRRRLPVAGIVRASREA-----ADNNNNYYASGKVVDESMIVLRKRIHEIKMAEQSHDPPADWFDWEKRYYSDYDSHIC
        SISS NSA FL   P + S   RRRLP+  ++ +SR A      +NNNNYYASGK+VDESMIVLRKRIHEIKM EQSH+PP+DW DWEKR YSDYDSHIC
Subjt:  SISSTNSASFL--FPSTSSGHHRRRLPVAGIVRASREA-----ADNNNNYYASGKVVDESMIVLRKRIHEIKMAEQSHDPPADWFDWEKRYYSDYDSHIC

Query:  EALGYLQSHLMNTRPSVALGMLLVITLSVPLSSALLLHHFFQIAVALLA
        EALGYLQSHLMNTRPSV+LG+LL+ITLSVPLSSA++LH F  IA ALLA
Subjt:  EALGYLQSHLMNTRPSVALGMLLVITLSVPLSSALLLHHFFQIAVALLA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G15010.1 unknown protein2.8e-2652.88Show/hide
Query:  NYYASGKVVDESMIVLRKRIHEIKMAEQSHDPPADWFDWEKRYYSDYDSHICEALGYLQSHLMNTRPSVALGMLLVITLSVPLSSALLLHHFFQIAVALL
        +YY  G+ VDE+M+VLRKRIHE+KM E++ +PP+ W  WEKR+Y +YD+ IC+AL  LQ+ LMN+RPSVA G  L++ +SVP+SSA+       +A+ LL
Subjt:  NYYASGKVVDESMIVLRKRIHEIKMAEQSHDPPADWFDWEKRYYSDYDSHICEALGYLQSHLMNTRPSVALGMLLVITLSVPLSSALLLHHFFQIAVALL

Query:  AAFH
         A H
Subjt:  AAFH

AT2G01300.1 unknown protein3.0e-2850.88Show/hide
Query:  VRASREAADNNNNYYASGKVVDESMIVLRKRIHEIKMAEQSHDPPADWFDWEKRYYSDYDSHICEALGYLQSHLMNTRPSVALGMLLVITLSVPLSSALL
        +R S  A+   ++YY  G++VDE+MIVLRKRIHE+KM E++++PP+ W DWEKR+Y+ YDS IC+++G LQS LMN+RP+VA+  LL + +SVP+SS ++
Subjt:  VRASREAADNNNNYYASGKVVDESMIVLRKRIHEIKMAEQSHDPPADWFDWEKRYYSDYDSHICEALGYLQSHLMNTRPSVALGMLLVITLSVPLSSALL

Query:  LHHFFQIAVALLAA
              +   LLAA
Subjt:  LHHFFQIAVALLAA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAATCCATTAATTCCCTTTCAATCTCCTCCACCAATTCCGCTTCCTTCCTCTTCCCTTCCACTTCCTCCGGCCACCACCGCCGCCGGCTACCAGTGGCCGGAATCGT
AAGGGCGTCGAGAGAAGCAGCCGACAACAACAATAATTACTACGCGAGCGGGAAAGTAGTAGACGAGAGCATGATCGTGCTCCGGAAACGAATCCACGAGATCAAGATGG
CGGAGCAAAGCCACGATCCGCCGGCGGATTGGTTTGATTGGGAGAAACGGTATTATTCCGATTACGATTCTCATATCTGTGAGGCTTTAGGCTATCTTCAATCTCATTTG
ATGAATACTCGCCCTAGCGTCGCCTTGGGAATGCTCCTTGTTATTACTCTCAGCGTTCCGCTTTCCTCCGCCCTTCTTCTCCACCACTTCTTCCAAATCGCCGTCGCGCT
TCTCGCCGCTTTCCATCCCTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAATCCATTAATTCCCTTTCAATCTCCTCCACCAATTCCGCTTCCTTCCTCTTCCCTTCCACTTCCTCCGGCCACCACCGCCGCCGGCTACCAGTGGCCGGAATCGT
AAGGGCGTCGAGAGAAGCAGCCGACAACAACAATAATTACTACGCGAGCGGGAAAGTAGTAGACGAGAGCATGATCGTGCTCCGGAAACGAATCCACGAGATCAAGATGG
CGGAGCAAAGCCACGATCCGCCGGCGGATTGGTTTGATTGGGAGAAACGGTATTATTCCGATTACGATTCTCATATCTGTGAGGCTTTAGGCTATCTTCAATCTCATTTG
ATGAATACTCGCCCTAGCGTCGCCTTGGGAATGCTCCTTGTTATTACTCTCAGCGTTCCGCTTTCCTCCGCCCTTCTTCTCCACCACTTCTTCCAAATCGCCGTCGCGCT
TCTCGCCGCTTTCCATCCCTAA
Protein sequenceShow/hide protein sequence
MKSINSLSISSTNSASFLFPSTSSGHHRRRLPVAGIVRASREAADNNNNYYASGKVVDESMIVLRKRIHEIKMAEQSHDPPADWFDWEKRYYSDYDSHICEALGYLQSHL
MNTRPSVALGMLLVITLSVPLSSALLLHHFFQIAVALLAAFHP