; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi09G006590 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi09G006590
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description10 kDa chaperonin-like
Genome locationchr09:7369430..7369963
RNA-Seq ExpressionLsi09G006590
SyntenyLsi09G006590
Gene Ontology termsGO:0000902 - cell morphogenesis (biological process)
GO:0006457 - protein folding (biological process)
GO:0007010 - cytoskeleton organization (biological process)
GO:0003779 - actin binding (molecular function)
GO:0005524 - ATP binding (molecular function)
GO:0016887 - ATPase activity (molecular function)
InterPro domainsIPR011032 - GroES-like superfamily
IPR020818 - GroES chaperonin family
IPR037124 - GroES chaperonin superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF3432182.1 hypothetical protein FNV43_RR26921 [Rhamnella rubrinervis]4.8e-3389.16Show/hide
Query:  MAKRLIPSLNRVLIEKILPPSKTSAGILLPESSTKLNSGKVVAVGPGARDNSGNLVPVCVKEGDTVLLPEYGGTPVKLGEKEY
        MA+RLIP+LNRVL+EKI+PPSKT+AGILLPESSTKLNSGKVVAVGPGARD SGN+VPVCVKEGDTVLLPEYGGT VKLGEKE+
Subjt:  MAKRLIPSLNRVLIEKILPPSKTSAGILLPESSTKLNSGKVVAVGPGARDNSGNLVPVCVKEGDTVLLPEYGGTPVKLGEKEY

XP_004150598.1 10 kDa chaperonin, mitochondrial [Cucumis sativus]3.7e-3391.57Show/hide
Query:  MAKRLIPSLNRVLIEKILPPSKTSAGILLPESSTKLNSGKVVAVGPGARDNSGNLVPVCVKEGDTVLLPEYGGTPVKLGEKEY
        MA+RLIPSLNRVLIEKI+PPSKTSAGILLPESS+KLNSGKV+AVGPGARD SGNLVPVCVKEGDTVLLPEYGGT VKLGEKE+
Subjt:  MAKRLIPSLNRVLIEKILPPSKTSAGILLPESSTKLNSGKVVAVGPGARDNSGNLVPVCVKEGDTVLLPEYGGTPVKLGEKEY

XP_008467132.1 PREDICTED: 10 kDa chaperonin-like [Cucumis melo]3.7e-3391.57Show/hide
Query:  MAKRLIPSLNRVLIEKILPPSKTSAGILLPESSTKLNSGKVVAVGPGARDNSGNLVPVCVKEGDTVLLPEYGGTPVKLGEKEY
        MAKRLIPSLNRVLIEKI+PPSKTSAGILLPESS+KLNSGKV+AVGPGARD +GNLVPVCVKEGDTVLLPEYGGT VKLGEKE+
Subjt:  MAKRLIPSLNRVLIEKILPPSKTSAGILLPESSTKLNSGKVVAVGPGARDNSGNLVPVCVKEGDTVLLPEYGGTPVKLGEKEY

XP_022152333.1 10 kDa chaperonin, mitochondrial-like [Momordica charantia]8.3e-3391.57Show/hide
Query:  MAKRLIPSLNRVLIEKILPPSKTSAGILLPESSTKLNSGKVVAVGPGARDNSGNLVPVCVKEGDTVLLPEYGGTPVKLGEKEY
        MAKRLIP LNRVLIEKI+PPSKT+AGILLPESSTKLNSGKVVAVGPGARD SGNLVPV VKEGDTVLLP+YGGTPVKLGEKE+
Subjt:  MAKRLIPSLNRVLIEKILPPSKTSAGILLPESSTKLNSGKVVAVGPGARDNSGNLVPVCVKEGDTVLLPEYGGTPVKLGEKEY

XP_038907054.1 10 kDa chaperonin, mitochondrial-like [Benincasa hispida]8.0e-3695.18Show/hide
Query:  MAKRLIPSLNRVLIEKILPPSKTSAGILLPESSTKLNSGKVVAVGPGARDNSGNLVPVCVKEGDTVLLPEYGGTPVKLGEKEY
        MAKRLIPSLNRVLIEKILPPSKTSAGILLPESSTKLNSGKV+AVGPGARDNSGNL+PVCVKEGDTVLLPEYGGTPVKLG+KE+
Subjt:  MAKRLIPSLNRVLIEKILPPSKTSAGILLPESSTKLNSGKVVAVGPGARDNSGNLVPVCVKEGDTVLLPEYGGTPVKLGEKEY

TrEMBL top hitse value%identityAlignment
A0A0A0KPH4 Uncharacterized protein5.6e-3592.94Show/hide
Query:  MAKRLIPSLNRVLIEKILPPSKTSAGILLPESSTKLNSGKVVAVGPGARDNSGNLVPVCVKEGDTVLLPEYGGTPVKLGEKEYAS
        MA+RLIPSLNRVLIEKI+PPSKTSAGILLPESS+KLNSGKV+AVGPGARD SGNLVPVCVKEGDTVLLPEYGGT VKLGEKEYAS
Subjt:  MAKRLIPSLNRVLIEKILPPSKTSAGILLPESSTKLNSGKVVAVGPGARDNSGNLVPVCVKEGDTVLLPEYGGTPVKLGEKEYAS

A0A1S3CU36 10 kDa chaperonin-like1.8e-3391.57Show/hide
Query:  MAKRLIPSLNRVLIEKILPPSKTSAGILLPESSTKLNSGKVVAVGPGARDNSGNLVPVCVKEGDTVLLPEYGGTPVKLGEKEY
        MAKRLIPSLNRVLIEKI+PPSKTSAGILLPESS+KLNSGKV+AVGPGARD +GNLVPVCVKEGDTVLLPEYGGT VKLGEKE+
Subjt:  MAKRLIPSLNRVLIEKILPPSKTSAGILLPESSTKLNSGKVVAVGPGARDNSGNLVPVCVKEGDTVLLPEYGGTPVKLGEKEY

A0A5D3E3M3 10 kDa chaperonin-like1.8e-3391.57Show/hide
Query:  MAKRLIPSLNRVLIEKILPPSKTSAGILLPESSTKLNSGKVVAVGPGARDNSGNLVPVCVKEGDTVLLPEYGGTPVKLGEKEY
        MAKRLIPSLNRVLIEKI+PPSKTSAGILLPESS+KLNSGKV+AVGPGARD +GNLVPVCVKEGDTVLLPEYGGT VKLGEKE+
Subjt:  MAKRLIPSLNRVLIEKILPPSKTSAGILLPESSTKLNSGKVVAVGPGARDNSGNLVPVCVKEGDTVLLPEYGGTPVKLGEKEY

A0A6J1DEL3 10 kDa chaperonin, mitochondrial-like4.0e-3391.57Show/hide
Query:  MAKRLIPSLNRVLIEKILPPSKTSAGILLPESSTKLNSGKVVAVGPGARDNSGNLVPVCVKEGDTVLLPEYGGTPVKLGEKEY
        MAKRLIP LNRVLIEKI+PPSKT+AGILLPESSTKLNSGKVVAVGPGARD SGNLVPV VKEGDTVLLP+YGGTPVKLGEKE+
Subjt:  MAKRLIPSLNRVLIEKILPPSKTSAGILLPESSTKLNSGKVVAVGPGARDNSGNLVPVCVKEGDTVLLPEYGGTPVKLGEKEY

A0A6P4AI72 10 kDa chaperonin, mitochondrial-like isoform X11.5e-3286.59Show/hide
Query:  AKRLIPSLNRVLIEKILPPSKTSAGILLPESSTKLNSGKVVAVGPGARDNSGNLVPVCVKEGDTVLLPEYGGTPVKLGEKEY
        AKRLIP+LNR+LIEKI+PPSKT+AG+LLPESSTKLNSGKVVAVGPGARD SGN++PVCVKEGDTVLLPEYGGT VKLG+KE+
Subjt:  AKRLIPSLNRVLIEKILPPSKTSAGILLPESSTKLNSGKVVAVGPGARDNSGNLVPVCVKEGDTVLLPEYGGTPVKLGEKEY

SwissProt top hitse value%identityAlignment
O59804 10 kDa heat shock protein, mitochondrial1.4e-1446.43Show/hide
Query:  AKRLIPSLNRVLIEKILPPSKTSAGILLPESST-KLNSGKVVAVGPGARDNSGNLVPVCVKEGDTVLLPEYGGTPVKLGEKEYA
        AK ++P L+R+L+++I   +KT++GI LPE S  KL+ G+V++VG G  +  G L    V  GD VLLP YGG+ +K+GE+EY+
Subjt:  AKRLIPSLNRVLIEKILPPSKTSAGILLPESST-KLNSGKVVAVGPGARDNSGNLVPVCVKEGDTVLLPEYGGTPVKLGEKEYA

P34893 10 kDa chaperonin, mitochondrial5.8e-2971.08Show/hide
Query:  MAKRLIPSLNRVLIEKILPPSKTSAGILLPESSTKLNSGKVVAVGPGARDNSGNLVPVCVKEGDTVLLPEYGGTPVKLGEKEY
        M KRLIP+ NR+L+++++ P+KT +GILLPE S+KLNSGKV+AVGPG+RD  G L+PV VKEGDTVLLPEYGGT VKLGE EY
Subjt:  MAKRLIPSLNRVLIEKILPPSKTSAGILLPESSTKLNSGKVVAVGPGARDNSGNLVPVCVKEGDTVLLPEYGGTPVKLGEKEY

P38910 10 kDa heat shock protein, mitochondrial4.0e-1447.56Show/hide
Query:  AKRLIPSLNRVLIEKILPPSKTSAGILLPESST-KLNSGKVVAVGPGARDNSGNLVPVCVKEGDTVLLPEYGGTPVKLGEKE
        AK ++P ++RVL+++I   +KT++G+ LPE +  KLN  +VVAVGPG  D +GN V   VK GD VL+P++GG+ +KLG  +
Subjt:  AKRLIPSLNRVLIEKILPPSKTSAGILLPESST-KLNSGKVVAVGPGARDNSGNLVPVCVKEGDTVLLPEYGGTPVKLGEKE

Q64433 10 kDa heat shock protein, mitochondrial4.4e-1348.78Show/hide
Query:  KRLIPSLNRVLIEKILPPSKTSAGILLPESST-KLNSGKVVAVGPGARDNSGNLVPVCVKEGDTVLLPEYGGTPVKLGEKEY
        ++ +P  +RVL+E+    + T  GI+LPE S  K+    VVAVG G +  SG + PV VK GD VLLPEYGGT V L +K+Y
Subjt:  KRLIPSLNRVLIEKILPPSKTSAGILLPESST-KLNSGKVVAVGPGARDNSGNLVPVCVKEGDTVLLPEYGGTPVKLGEKEY

Q96539 10 kDa chaperonin9.8e-2971.08Show/hide
Query:  MAKRLIPSLNRVLIEKILPPSKTSAGILLPESSTKLNSGKVVAVGPGARDNSGNLVPVCVKEGDTVLLPEYGGTPVKLGEKEY
        M KRLIP+ NR+L++ ++ P+KT +GILLPE ++KLNSGKV+AVGPG+RD  G L+PV VKEGDTVLLPEYGGT VKLGEKEY
Subjt:  MAKRLIPSLNRVLIEKILPPSKTSAGILLPESSTKLNSGKVVAVGPGARDNSGNLVPVCVKEGDTVLLPEYGGTPVKLGEKEY

Arabidopsis top hitse value%identityAlignment
AT1G14980.1 chaperonin 104.1e-3071.08Show/hide
Query:  MAKRLIPSLNRVLIEKILPPSKTSAGILLPESSTKLNSGKVVAVGPGARDNSGNLVPVCVKEGDTVLLPEYGGTPVKLGEKEY
        M KRLIP+ NR+L+++++ P+KT +GILLPE S+KLNSGKV+AVGPG+RD  G L+PV VKEGDTVLLPEYGGT VKLGE EY
Subjt:  MAKRLIPSLNRVLIEKILPPSKTSAGILLPESSTKLNSGKVVAVGPGARDNSGNLVPVCVKEGDTVLLPEYGGTPVKLGEKEY

AT1G23100.1 GroES-like family protein8.8e-3379.52Show/hide
Query:  MAKRLIPSLNRVLIEKILPPSKTSAGILLPESSTKLNSGKVVAVGPGARDNSGNLVPVCVKEGDTVLLPEYGGTPVKLGEKEY
        MAKRLIP+LNRVL+EKILPPSKT +GILLPE S++LNSG+V+AVGPGARD +GNL+PV VKEGD VLLPE+GGT VKLGEKE+
Subjt:  MAKRLIPSLNRVLIEKILPPSKTSAGILLPESSTKLNSGKVVAVGPGARDNSGNLVPVCVKEGDTVLLPEYGGTPVKLGEKEY

AT5G20720.1 chaperonin 202.9e-0740.79Show/hide
Query:  KRLIPSLNRVLIEKILPPSKTSAGILLPESS-TKLNSGKVVAVGPGARDNSGNLVPVCVKEGDTVLLPEYGGTPVK
        K L P  +RV I+      KT+ G+LL E++  K + G V+AVGPG+ D  G + P+ V  G TVL  +Y G   K
Subjt:  KRLIPSLNRVLIEKILPPSKTSAGILLPESS-TKLNSGKVVAVGPGARDNSGNLVPVCVKEGDTVLLPEYGGTPVK

AT5G20720.2 chaperonin 202.9e-0740.79Show/hide
Query:  KRLIPSLNRVLIEKILPPSKTSAGILLPESS-TKLNSGKVVAVGPGARDNSGNLVPVCVKEGDTVLLPEYGGTPVK
        K L P  +RV I+      KT+ G+LL E++  K + G V+AVGPG+ D  G + P+ V  G TVL  +Y G   K
Subjt:  KRLIPSLNRVLIEKILPPSKTSAGILLPESS-TKLNSGKVVAVGPGARDNSGNLVPVCVKEGDTVLLPEYGGTPVK

AT5G20720.3 chaperonin 202.9e-0740.79Show/hide
Query:  KRLIPSLNRVLIEKILPPSKTSAGILLPESS-TKLNSGKVVAVGPGARDNSGNLVPVCVKEGDTVLLPEYGGTPVK
        K L P  +RV I+      KT+ G+LL E++  K + G V+AVGPG+ D  G + P+ V  G TVL  +Y G   K
Subjt:  KRLIPSLNRVLIEKILPPSKTSAGILLPESS-TKLNSGKVVAVGPGARDNSGNLVPVCVKEGDTVLLPEYGGTPVK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAAGCGCTTAATTCCATCCCTCAATCGTGTCTTGATTGAGAAAATCCTTCCTCCTTCTAAAACCTCTGCCGGCATTCTTCTCCCAGAGAGCTCCACCAAGTTGAA
CTCCGGCAAGGTGGTTGCGGTGGGTCCTGGTGCACGGGATAACAGCGGGAATCTGGTTCCGGTCTGTGTGAAAGAAGGTGATACGGTTCTTTTGCCTGAATATGGAGGCA
CGCCAGTGAAGCTCGGGGAGAAAGAGTATGCTTCTAAACAGTATTAG
mRNA sequenceShow/hide mRNA sequence
CTAAAACCCCACAACATGAAAAATCTCTAAACCCTCGTGTCCTAGAACCTTCTACTCTCATCCAGAACCCCAAATTTGCACTTCTTCTTTCTTTTCCATTAAAGCAAACA
CCACTCTCCATCCTCTTCCTCGCACCTGAATCTCAAAAACCCTAATTCTTCCAGCACAGACGTATGGCGAAGCGCTTAATTCCATCCCTCAATCGTGTCTTGATTGAGAA
AATCCTTCCTCCTTCTAAAACCTCTGCCGGCATTCTTCTCCCAGAGAGCTCCACCAAGTTGAACTCCGGCAAGGTGGTTGCGGTGGGTCCTGGTGCACGGGATAACAGCG
GGAATCTGGTTCCGGTCTGTGTGAAAGAAGGTGATACGGTTCTTTTGCCTGAATATGGAGGCACGCCAGTGAAGCTCGGGGAGAAAGAGTATGCTTCTAAACAGTATTAG
Protein sequenceShow/hide protein sequence
MAKRLIPSLNRVLIEKILPPSKTSAGILLPESSTKLNSGKVVAVGPGARDNSGNLVPVCVKEGDTVLLPEYGGTPVKLGEKEYASKQY