; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi09G006710 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi09G006710
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionHMG-Y-related protein A
Genome locationchr09:7578047..7579271
RNA-Seq ExpressionLsi09G006710
SyntenyLsi09G006710
Gene Ontology termsGO:0006334 - nucleosome assembly (biological process)
GO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0016584 - nucleosome positioning (biological process)
GO:0030261 - chromosome condensation (biological process)
GO:0045910 - negative regulation of DNA recombination (biological process)
GO:0000786 - nucleosome (cellular component)
GO:0005730 - nucleolus (cellular component)
GO:0003690 - double-stranded DNA binding (molecular function)
GO:0008168 - methyltransferase activity (molecular function)
GO:0031492 - nucleosomal DNA binding (molecular function)
InterPro domainsIPR000116 - High mobility group protein HMGA
IPR005818 - Linker histone H1/H5, domain H15
IPR017956 - AT hook, DNA-binding motif
IPR031059 - High mobility group protein HMGA, plant
IPR036388 - Winged helix-like DNA-binding domain superfamily
IPR036390 - Winged helix DNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004150116.1 HMG-Y-related protein A [Cucumis sativus]1.2e-9497.85Show/hide
Query:  MATDDQLNNPPQPPPPAPSLPHYPEMIMTAIESLNDKNGVSKSAITKQIESTYGDLPPAFTTLLTHHLDVMKQTGQLLFVKNNYMKPDPNAPPKRGRGRP
        MATDDQLNNPPQPPPPAPSLPHYPEMIM AI+SLNDKNGVSKSAITKQIESTYGDLPPAFTTLLTHHLDVMKQTGQLLF+KNNYMKPDPNAPPKRGRGRP
Subjt:  MATDDQLNNPPQPPPPAPSLPHYPEMIMTAIESLNDKNGVSKSAITKQIESTYGDLPPAFTTLLTHHLDVMKQTGQLLFVKNNYMKPDPNAPPKRGRGRP

Query:  PKPKVPLPPGTVVSPPRPRGRPPKPKDPFAPISQPKKKTTSGSGRPRGRPPKYPKPAPTSA-PVAGPPRGRGRPPKVKPAVAPVGC
        PKPKVPLPPGTVVSPPRPRGRPPKPKDPFAPISQPKKKTTSGSGRPRGRPPKYPKPAPTSA PVAGPPRGRGRPPKVKPAVAPVGC
Subjt:  PKPKVPLPPGTVVSPPRPRGRPPKPKDPFAPISQPKKKTTSGSGRPRGRPPKYPKPAPTSA-PVAGPPRGRGRPPKVKPAVAPVGC

XP_008466945.1 PREDICTED: HMG-Y-related protein A [Cucumis melo]9.4e-9598.39Show/hide
Query:  MATDDQLNNPPQPPPPAPSLPHYPEMIMTAIESLNDKNGVSKSAITKQIESTYGDLPPAFTTLLTHHLDVMKQTGQLLFVKNNYMKPDPNAPPKRGRGRP
        MATDDQLNNPPQPPPPAPSLPHYPEMIM AI+SLNDKNGVSKSAITKQIESTYGDLPPAFTTLLTHHLDVMKQTGQLLFVKNNYMKPDPNAPPKRGRGRP
Subjt:  MATDDQLNNPPQPPPPAPSLPHYPEMIMTAIESLNDKNGVSKSAITKQIESTYGDLPPAFTTLLTHHLDVMKQTGQLLFVKNNYMKPDPNAPPKRGRGRP

Query:  PKPKVPLPPGTVVSPPRPRGRPPKPKDPFAPISQPKKKTTSGSGRPRGRPPKYPKPAPTSA-PVAGPPRGRGRPPKVKPAVAPVGC
        PKPKVPLPPGTVVSPPRPRGRPPKPKDPFAPISQPKKKTTSGSGRPRGRPPKYPKPAPTSA PVAGPPRGRGRPPKVKPAVAPVGC
Subjt:  PKPKVPLPPGTVVSPPRPRGRPPKPKDPFAPISQPKKKTTSGSGRPRGRPPKYPKPAPTSA-PVAGPPRGRGRPPKVKPAVAPVGC

XP_022938491.1 HMG-Y-related protein A [Cucurbita moschata]1.8e-9093.55Show/hide
Query:  MATDDQLNNPPQPPPPAPSLPHYPEMIMTAIESLNDKNGVSKSAITKQIESTYGDLPPAFTTLLTHHLDVMKQTGQLLFVKNNYMKPDPNAPPKRGRGRP
        M T+DQLNNPPQPPPPAPSLPHYPEMIMTAIE+LNDKNGVSK+AITKQIESTYGDLPPAFTTLL HHLDVMKQTG+LLFVKNNYMKPDPNAPPKRGRGRP
Subjt:  MATDDQLNNPPQPPPPAPSLPHYPEMIMTAIESLNDKNGVSKSAITKQIESTYGDLPPAFTTLLTHHLDVMKQTGQLLFVKNNYMKPDPNAPPKRGRGRP

Query:  PKPKVPLPPGTVVSPPRPRGRPPKPKDPFAPISQPKKKTTSGSGRPRGRPPKYPKPAPTSA-PVAGPPRGRGRPPKVKPAVAPVGC
        PKPKVPLPPGTVV PPRPRGRPPKPKDPFAPISQPKKKT++GSGRPRGRPPK PKPAPTSA PVAGPPRGRGRPPKVKPAVAP+GC
Subjt:  PKPKVPLPPGTVVSPPRPRGRPPKPKDPFAPISQPKKKTTSGSGRPRGRPPKYPKPAPTSA-PVAGPPRGRGRPPKVKPAVAPVGC

XP_022953026.1 HMG-Y-related protein B-like [Cucurbita moschata]1.4e-9092.97Show/hide
Query:  MATDDQLNNPPQPPPPAPSLPHYPEMIMTAIESLNDKNGVSKSAITKQIESTYGDLPPAFTTLLTHHLDVMKQTGQLLFVKNNYMKPDPNAPPKRGRGRP
        MAT DQLNNPPQPPPPAPSLPHYPEMIM+AI++LNDKNGVSKS +TKQIESTYGDLPPAFTTLLTHHLDVMKQTGQLLFVKNNYMKPDPNAPPKRGRGRP
Subjt:  MATDDQLNNPPQPPPPAPSLPHYPEMIMTAIESLNDKNGVSKSAITKQIESTYGDLPPAFTTLLTHHLDVMKQTGQLLFVKNNYMKPDPNAPPKRGRGRP

Query:  PKPKVPLPPGTVVSPPRPRGRPPKPKDPFAPISQPKKKTTSGSGRPRGRPPKYPKPAPTSAPVAGPPRGRGRPPKVKPAVAPVGC
        PKPKVPLPPGTVVSPPRPRGRPPK +DPFAPISQPKKK +SGSGRPRGRPPKYPKPAPTS PVA PPRGRGRPPK+KPAVAPVGC
Subjt:  PKPKVPLPPGTVVSPPRPRGRPPKPKDPFAPISQPKKKTTSGSGRPRGRPPKYPKPAPTSAPVAGPPRGRGRPPKVKPAVAPVGC

XP_038906720.1 HMG-Y-related protein A-like [Benincasa hispida]5.0e-9698.92Show/hide
Query:  MATDDQLNNPPQPPPPAPSLPHYPEMIMTAIESLNDKNGVSKSAITKQIESTYGDLPPAFTTLLTHHLDVMKQTGQLLFVKNNYMKPDPNAPPKRGRGRP
        MATDDQLNNPPQPPPPAPSLPHYPEMIMTAIESLNDKNGVSKSAITKQIESTYGDLPPAF+TLLTHHLDVMKQTGQLLFVKNNYMKPDPNAPPKRGRGRP
Subjt:  MATDDQLNNPPQPPPPAPSLPHYPEMIMTAIESLNDKNGVSKSAITKQIESTYGDLPPAFTTLLTHHLDVMKQTGQLLFVKNNYMKPDPNAPPKRGRGRP

Query:  PKPKVPLPPGTVVSPPRPRGRPPKPKDPFAPISQPKKKTTSGSGRPRGRPPKYPKPAPTSAPVAGPPRGRGRPPKVKPAVAPVGC
        PKPKVPLPPGTVVSPPRPRGRPPKPKDPFAPISQPKKKTT GSGRPRGRPPKYPKPAPTSAPVAGPPRGRGRPPKVKPAVAPVGC
Subjt:  PKPKVPLPPGTVVSPPRPRGRPPKPKDPFAPISQPKKKTTSGSGRPRGRPPKYPKPAPTSAPVAGPPRGRGRPPKVKPAVAPVGC

TrEMBL top hitse value%identityAlignment
A0A0A0KPG4 H15 domain-containing protein5.9e-9597.85Show/hide
Query:  MATDDQLNNPPQPPPPAPSLPHYPEMIMTAIESLNDKNGVSKSAITKQIESTYGDLPPAFTTLLTHHLDVMKQTGQLLFVKNNYMKPDPNAPPKRGRGRP
        MATDDQLNNPPQPPPPAPSLPHYPEMIM AI+SLNDKNGVSKSAITKQIESTYGDLPPAFTTLLTHHLDVMKQTGQLLF+KNNYMKPDPNAPPKRGRGRP
Subjt:  MATDDQLNNPPQPPPPAPSLPHYPEMIMTAIESLNDKNGVSKSAITKQIESTYGDLPPAFTTLLTHHLDVMKQTGQLLFVKNNYMKPDPNAPPKRGRGRP

Query:  PKPKVPLPPGTVVSPPRPRGRPPKPKDPFAPISQPKKKTTSGSGRPRGRPPKYPKPAPTSA-PVAGPPRGRGRPPKVKPAVAPVGC
        PKPKVPLPPGTVVSPPRPRGRPPKPKDPFAPISQPKKKTTSGSGRPRGRPPKYPKPAPTSA PVAGPPRGRGRPPKVKPAVAPVGC
Subjt:  PKPKVPLPPGTVVSPPRPRGRPPKPKDPFAPISQPKKKTTSGSGRPRGRPPKYPKPAPTSA-PVAGPPRGRGRPPKVKPAVAPVGC

A0A1S3CSD8 HMG-Y-related protein A4.5e-9598.39Show/hide
Query:  MATDDQLNNPPQPPPPAPSLPHYPEMIMTAIESLNDKNGVSKSAITKQIESTYGDLPPAFTTLLTHHLDVMKQTGQLLFVKNNYMKPDPNAPPKRGRGRP
        MATDDQLNNPPQPPPPAPSLPHYPEMIM AI+SLNDKNGVSKSAITKQIESTYGDLPPAFTTLLTHHLDVMKQTGQLLFVKNNYMKPDPNAPPKRGRGRP
Subjt:  MATDDQLNNPPQPPPPAPSLPHYPEMIMTAIESLNDKNGVSKSAITKQIESTYGDLPPAFTTLLTHHLDVMKQTGQLLFVKNNYMKPDPNAPPKRGRGRP

Query:  PKPKVPLPPGTVVSPPRPRGRPPKPKDPFAPISQPKKKTTSGSGRPRGRPPKYPKPAPTSA-PVAGPPRGRGRPPKVKPAVAPVGC
        PKPKVPLPPGTVVSPPRPRGRPPKPKDPFAPISQPKKKTTSGSGRPRGRPPKYPKPAPTSA PVAGPPRGRGRPPKVKPAVAPVGC
Subjt:  PKPKVPLPPGTVVSPPRPRGRPPKPKDPFAPISQPKKKTTSGSGRPRGRPPKYPKPAPTSA-PVAGPPRGRGRPPKVKPAVAPVGC

A0A5D3E3W3 HMG-Y-related protein A4.5e-9598.39Show/hide
Query:  MATDDQLNNPPQPPPPAPSLPHYPEMIMTAIESLNDKNGVSKSAITKQIESTYGDLPPAFTTLLTHHLDVMKQTGQLLFVKNNYMKPDPNAPPKRGRGRP
        MATDDQLNNPPQPPPPAPSLPHYPEMIM AI+SLNDKNGVSKSAITKQIESTYGDLPPAFTTLLTHHLDVMKQTGQLLFVKNNYMKPDPNAPPKRGRGRP
Subjt:  MATDDQLNNPPQPPPPAPSLPHYPEMIMTAIESLNDKNGVSKSAITKQIESTYGDLPPAFTTLLTHHLDVMKQTGQLLFVKNNYMKPDPNAPPKRGRGRP

Query:  PKPKVPLPPGTVVSPPRPRGRPPKPKDPFAPISQPKKKTTSGSGRPRGRPPKYPKPAPTSA-PVAGPPRGRGRPPKVKPAVAPVGC
        PKPKVPLPPGTVVSPPRPRGRPPKPKDPFAPISQPKKKTTSGSGRPRGRPPKYPKPAPTSA PVAGPPRGRGRPPKVKPAVAPVGC
Subjt:  PKPKVPLPPGTVVSPPRPRGRPPKPKDPFAPISQPKKKTTSGSGRPRGRPPKYPKPAPTSA-PVAGPPRGRGRPPKVKPAVAPVGC

A0A6J1GLV6 HMG-Y-related protein B-like6.8e-9192.97Show/hide
Query:  MATDDQLNNPPQPPPPAPSLPHYPEMIMTAIESLNDKNGVSKSAITKQIESTYGDLPPAFTTLLTHHLDVMKQTGQLLFVKNNYMKPDPNAPPKRGRGRP
        MAT DQLNNPPQPPPPAPSLPHYPEMIM+AI++LNDKNGVSKS +TKQIESTYGDLPPAFTTLLTHHLDVMKQTGQLLFVKNNYMKPDPNAPPKRGRGRP
Subjt:  MATDDQLNNPPQPPPPAPSLPHYPEMIMTAIESLNDKNGVSKSAITKQIESTYGDLPPAFTTLLTHHLDVMKQTGQLLFVKNNYMKPDPNAPPKRGRGRP

Query:  PKPKVPLPPGTVVSPPRPRGRPPKPKDPFAPISQPKKKTTSGSGRPRGRPPKYPKPAPTSAPVAGPPRGRGRPPKVKPAVAPVGC
        PKPKVPLPPGTVVSPPRPRGRPPK +DPFAPISQPKKK +SGSGRPRGRPPKYPKPAPTS PVA PPRGRGRPPK+KPAVAPVGC
Subjt:  PKPKVPLPPGTVVSPPRPRGRPPKPKDPFAPISQPKKKTTSGSGRPRGRPPKYPKPAPTSAPVAGPPRGRGRPPKVKPAVAPVGC

A0A6J1JSA2 HMG-Y-related protein B-like6.8e-9192.97Show/hide
Query:  MATDDQLNNPPQPPPPAPSLPHYPEMIMTAIESLNDKNGVSKSAITKQIESTYGDLPPAFTTLLTHHLDVMKQTGQLLFVKNNYMKPDPNAPPKRGRGRP
        MAT DQLNNPPQPPPPAPSLPHYPEMIM+AI++LNDKNGVSKS +TKQIESTYGDLPPAFTTLLTHHLDVMKQTGQLLFVKNNYMKPDPNAPPKRGRGRP
Subjt:  MATDDQLNNPPQPPPPAPSLPHYPEMIMTAIESLNDKNGVSKSAITKQIESTYGDLPPAFTTLLTHHLDVMKQTGQLLFVKNNYMKPDPNAPPKRGRGRP

Query:  PKPKVPLPPGTVVSPPRPRGRPPKPKDPFAPISQPKKKTTSGSGRPRGRPPKYPKPAPTSAPVAGPPRGRGRPPKVKPAVAPVGC
        PKPKVPLPPGTVVSPPRPRGRPPK +DPFAPISQPKKK +SGSGRPRGRPPKYPKPAPTS PVA PPRGRGRPPK+KPAVAPVGC
Subjt:  PKPKVPLPPGTVVSPPRPRGRPPKPKDPFAPISQPKKKTTSGSGRPRGRPPKYPKPAPTSAPVAGPPRGRGRPPKVKPAVAPVGC

SwissProt top hitse value%identityAlignment
Q00423 HMG-Y-related protein A2.6e-4762.5Show/hide
Query:  MATDDQLNNPPQPPPPAPSLPHYPEMIMTAIESLNDKNGVSKSAITKQIESTYGDLPPAFTTLLTHHLDVMKQTGQLLFVKNNYMKPDPNAPPKRGRGRP
        MAT++   N PQ      SLP YPEMI+  +E+LN+ NG +KSAI+K IE+TYG+LP A  T+L  HL+ MK +G+L F +NNYMK DPNAPPKRGRGRP
Subjt:  MATDDQLNNPPQPPPPAPSLPHYPEMIMTAIESLNDKNGVSKSAITKQIESTYGDLPPAFTTLLTHHLDVMKQTGQLLFVKNNYMKPDPNAPPKRGRGRP

Query:  PKPKVPLPPGTVVSPPRPRGRPPKPKDPFAPISQPKKKTTSGSGRPRGRPPKYPKPAPTSAPVA-GPPRGRGRPPKVKPAVAPV
        PKPK PLPPGTVVSPPRPRGRP  PKDP AP   PK K T GSGRPRGRP K P+    +AP A    R RGRPPKVKP +  V
Subjt:  PKPKVPLPPGTVVSPPRPRGRPPKPKDPFAPISQPKKKTTSGSGRPRGRPPKYPKPAPTSAPVA-GPPRGRGRPPKVKPAVAPV

Q10370 HMG-Y-related protein B (Fragment)4.4e-3963.16Show/hide
Query:  SLNDKNGVSKSAITKQIESTYGDLPPAFTTLLTHHLDVMKQTGQLLFVKNNYMKPDPNAPPKRGRGRPPKPKVPLPPGTVVSPPRPRGRPPKPKDPFAPI
        +LN+ +G +KSAI+K IE+TYG+LP    T+L  HL+ MK++G+L F +NNYMK DPNAPPKRGRGRPPKPKVPLPPGTVVSPPRPRGRP  PKDP AP 
Subjt:  SLNDKNGVSKSAITKQIESTYGDLPPAFTTLLTHHLDVMKQTGQLLFVKNNYMKPDPNAPPKRGRGRPPKPKVPLPPGTVVSPPRPRGRPPKPKDPFAPI

Query:  SQPKKKTTSGSGRPRGRPPKYPK-PAPTSAPVAGPPRGRGRPPKVKPAVAPV
          PK K T  +GRPRGRP K  + PA  S       R RGRPPKVKP +  V
Subjt:  SQPKKKTTSGSGRPRGRPPKYPK-PAPTSAPVAGPPRGRGRPPKVKPAVAPV

Q43386 HMG-Y-related protein A1.4e-4561.05Show/hide
Query:  PAPSLPHYPEMIMTAIESLNDKNGVSKSAITKQIESTYGDLPPAFTTLLTHHLDVMKQTGQLLFVKNNYMKPDPNAPPKRGRGRPPKPK---------VP
        P+ SLP YP+MIM AIESLNDKNG +K+ I K IEST   LPP+  TLL++HL+ MK+TGQL+ VKNNYMKPDP+APPKRGRGRPPK K           
Subjt:  PAPSLPHYPEMIMTAIESLNDKNGVSKSAITKQIESTYGDLPPAFTTLLTHHLDVMKQTGQLLFVKNNYMKPDPNAPPKRGRGRPPKPK---------VP

Query:  LPPGTVVS--PPRPRGRPPKPKDPFAPISQPKKKTTSGSGRPRGRPPKYPK--------PAPTSAPVAGPPRGRGRPPKVKP-AVAPVGC
        +   TVVS  PPR RGRPPKPKDP  P   P++K  +GSGRPRGRPPK P+        P P +A   G  RGRGRPPKVKP  VAPVGC
Subjt:  LPPGTVVS--PPRPRGRPPKPKDPFAPISQPKKKTTSGSGRPRGRPPKYPK--------PAPTSAPVAGPPRGRGRPPKVKP-AVAPVGC

Q9FYS5 HMG-Y-related protein A9.6e-3451.27Show/hide
Query:  MATDDQLNNPPQPPPPAPSLPHYPEMIMTAIESLNDKNGVSKSAITKQIESTYGDLPPAFTTLLTHHLDVMKQTGQLLFVKNNYMKPD-PNAPPKRGRGR
        MATD+     P PP        YPEMI+ AIE L+DK+G +KSAI+K IE  YG LPPA  +LLT HL  MK++G+L+F+KNNY +   P+APPKRGRGR
Subjt:  MATDDQLNNPPQPPPPAPSLPHYPEMIMTAIESLNDKNGVSKSAITKQIESTYGDLPPAFTTLLTHHLDVMKQTGQLLFVKNNYMKPD-PNAPPKRGRGR

Query:  PPK---PKVPLP-PGTVVSPPRPRGRPPKPKDPFAPISQPKKKTTSGSGRPRGRPPK----------YPKPAPTSAPVAGPP--RGRGRPPKVKPAV
        PPK   P  P P P +  S  R RGRPPK K   +P+    K+ T+G  +PRGRPPK           P PAP  A     P  RGRGRPPKV+PAV
Subjt:  PPK---PKVPLP-PGTVVSPPRPRGRPPKPKDPFAPISQPKKKTTSGSGRPRGRPPK----------YPKPAPTSAPVAGPP--RGRGRPPKVKPAV

Q9M5W4 Histone H14.2e-0532.96Show/hide
Query:  SLPHYPEMIMTAIESLNDKNGVSKSAITKQIESTYGDLPPAFTTLLTHHLDVMKQTGQLLFVKNNYMKPDPNAPPKRGRGRP---PKPKVPLPPGTVVSP
        S P + EMI  AI +L ++ G S+ AI K +E  +  LP  F  LL  HL  +  +G+L+ VKN++  P   A P     +    PKPKV   P T    
Subjt:  SLPHYPEMIMTAIESLNDKNGVSKSAITKQIESTYGDLPPAFTTLLTHHLDVMKQTGQLLFVKNNYMKPDPNAPPKRGRGRP---PKPKVPLPPGTVVSP

Query:  PRPRGR---------PPKPKDPFAPISQPKKKTTSGSGRPRGRPPKYPKPAPTSAPVAGPPRGRGRP-PKVKPAVAPVG
         +P+ +           K      P ++PK KT   +G+P+    K  K A T+A VA P + +  P  KVK   +P G
Subjt:  PRPRGR---------PPKPKDPFAPISQPKKKTTSGSGRPRGRPPKYPKPAPTSAPVAGPPRGRGRP-PKVKPAVAPVG

Arabidopsis top hitse value%identityAlignment
AT1G14900.1 high mobility group A1.0e-4661.05Show/hide
Query:  PAPSLPHYPEMIMTAIESLNDKNGVSKSAITKQIESTYGDLPPAFTTLLTHHLDVMKQTGQLLFVKNNYMKPDPNAPPKRGRGRPPKPK---------VP
        P+ SLP YP+MIM AIESLNDKNG +K+ I K IEST   LPP+  TLL++HL+ MK+TGQL+ VKNNYMKPDP+APPKRGRGRPPK K           
Subjt:  PAPSLPHYPEMIMTAIESLNDKNGVSKSAITKQIESTYGDLPPAFTTLLTHHLDVMKQTGQLLFVKNNYMKPDPNAPPKRGRGRPPKPK---------VP

Query:  LPPGTVVS--PPRPRGRPPKPKDPFAPISQPKKKTTSGSGRPRGRPPKYPK--------PAPTSAPVAGPPRGRGRPPKVKP-AVAPVGC
        +   TVVS  PPR RGRPPKPKDP  P   P++K  +GSGRPRGRPPK P+        P P +A   G  RGRGRPPKVKP  VAPVGC
Subjt:  LPPGTVVS--PPRPRGRPPKPKDPFAPISQPKKKTTSGSGRPRGRPPKYPK--------PAPTSAPVAGPPRGRGRPPKVKP-AVAPVGC

AT1G48620.1 high mobility group A53.4e-1035.89Show/hide
Query:  ATDDQLNNPPQPPPPAPSLPHYPEMIMTAIESLNDKNGVSKSAITKQIESTYGDLPPAFTTLLTHHLDVMKQTGQLLFVKNNYMKPDPNAPPKRGRGRP-
        A   Q    P PP P+ S P Y +MI TAI +LN+ +G SK AI++ IE  Y  +P A   LLTHHL  +K +G L+ VK +Y       PP      P 
Subjt:  ATDDQLNNPPQPPPPAPSLPHYPEMIMTAIESLNDKNGVSKSAITKQIESTYGDLPPAFTTLLTHHLDVMKQTGQLLFVKNNYMKPDPNAPPKRGRGRP-

Query:  --------------PKPKVPLPPGTVVSPPRPRGRPPKPKDPFAPISQP---KKKTTSGSGRPRGR-------PPKYP-KPAPTSAPVAGPPRGRGRPPK
                      P P   L   T  +  R RGRPPK K P     QP    K T   S  P  R       PP+ P +P        G PR  G  P 
Subjt:  --------------PKPKVPLPPGTVVSPPRPRGRPPKPKDPFAPISQP---KKKTTSGSGRPRGR-------PPKYP-KPAPTSAPVAGPPRGRGRPPK

Query:  VKPAVAPVG
        VKPA +  G
Subjt:  VKPAVAPVG

AT3G18035.1 winged-helix DNA-binding transcription factor family protein1.3e-0935.47Show/hide
Query:  PQPP----PPAPSLPH--YPEMIMTAIESLNDKNGVSKSAITKQIESTYGDLPPAFTTLLTHHLDVMKQTGQLLFVKNNYMKPDPNAPP--------KRG
        PQP      P  S+PH  Y EMI  AI +LN+ +G SK AI++ IE  Y  L  A   LLTHHL  +K +G L  VK +Y     + PP           
Subjt:  PQPP----PPAPSLPH--YPEMIMTAIESLNDKNGVSKSAITKQIESTYGDLPPAFTTLLTHHLDVMKQTGQLLFVKNNYMKPDPNAPP--------KRG

Query:  RGRP-PKPKV-------PLPPGTVVSP-PRPRGRPPKPKDPF--APISQ-PKKKTTSGSGRPRGRPPKYPKPAPTSAPVA-GPPRGRGRPPK---VKPAV
        +G   P+ ++       P+  G+   P  R RGRPPKPK      P+ Q P       +G+P     +   P P   PV     RG GRP K     PA 
Subjt:  RGRP-PKPKV-------PLPPGTVVSP-PRPRGRPPKPKDPF--APISQ-PKKKTTSGSGRPRGRPPKYPKPAPTSAPVA-GPPRGRGRPPK---VKPAV

Query:  APV
        AP+
Subjt:  APV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTACCGACGATCAACTCAACAACCCTCCACAACCACCTCCCCCTGCTCCCTCTCTCCCCCACTACCCCGAGATGATTATGACAGCGATCGAATCTCTAAACGACAA
AAACGGAGTGAGCAAATCGGCGATTACTAAGCAAATCGAGTCCACATACGGCGATCTGCCCCCTGCTTTCACTACGCTTCTCACTCACCACTTAGACGTCATGAAGCAAA
CCGGCCAACTCCTCTTCGTCAAAAACAACTACATGAAGCCCGATCCCAACGCCCCACCCAAGCGTGGCCGTGGTCGTCCTCCAAAGCCCAAAGTCCCTCTCCCACCAGGC
ACCGTCGTCTCTCCGCCACGCCCACGTGGCCGTCCTCCCAAACCCAAAGATCCATTCGCTCCCATTTCACAGCCTAAGAAGAAAACCACCTCGGGAAGTGGAAGGCCACG
TGGCCGCCCCCCGAAGTACCCGAAACCGGCGCCGACCTCTGCTCCAGTCGCCGGCCCTCCCAGAGGTAGAGGACGGCCGCCGAAGGTAAAGCCGGCCGTCGCCCCTGTTG
GTTGTTGA
mRNA sequenceShow/hide mRNA sequence
CTATCCCCAGCCGTCAGATCTGCTCTGCCCTTCCTCCCGATCCCCTTCTCTCCCTATTTCCCCTTTTTAAATCCTCCTCTTTCCCCTTCCTCAATCGTCTTCTTCCCACC
AAACCTACAGTGTTTCTCTCTCATCCTCCTCTCTCTCTCTAAAATCTAATCATCTCCGACGTCTCCTCCGCCGCCATGGCTACCGACGATCAACTCAACAACCCTCCACA
ACCACCTCCCCCTGCTCCCTCTCTCCCCCACTACCCCGAGATGATTATGACAGCGATCGAATCTCTAAACGACAAAAACGGAGTGAGCAAATCGGCGATTACTAAGCAAA
TCGAGTCCACATACGGCGATCTGCCCCCTGCTTTCACTACGCTTCTCACTCACCACTTAGACGTCATGAAGCAAACCGGCCAACTCCTCTTCGTCAAAAACAACTACATG
AAGCCCGATCCCAACGCCCCACCCAAGCGTGGCCGTGGTCGTCCTCCAAAGCCCAAAGTCCCTCTCCCACCAGGCACCGTCGTCTCTCCGCCACGCCCACGTGGCCGTCC
TCCCAAACCCAAAGATCCATTCGCTCCCATTTCACAGCCTAAGAAGAAAACCACCTCGGGAAGTGGAAGGCCACGTGGCCGCCCCCCGAAGTACCCGAAACCGGCGCCGA
CCTCTGCTCCAGTCGCCGGCCCTCCCAGAGGTAGAGGACGGCCGCCGAAGGTAAAGCCGGCCGTCGCCCCTGTTGGTTGTTGAGTGGAACAAAAACAGAGGATGAGAGAG
AGAAATAGAGATAGAGAGAGAGAGAAGAAGATGAAATTGTTTAGGTTGTGTTTAGCTGCTGAGAGCTCTCCGGGAATTGCTCTGTTTTTAATTTTTTTTTTTTCTAATTT
TAAACATTTTTAATTTTACTTCTCTTTTTTTTTTTTTAATGTGTATTACGTGGCGGGTGATGTATGGCTGTAATTCTGGGTGGGGGTTAGGAGACTGTAATTGCATGTAA
GTTATTTTACCGGCTGTTAGGGCTTTTTTCTCTCTCTTTCCGTCTCTTTTTTCTCTCTTAAATTCTCCCGAAAAAAAAAAAGAAATTAGATTTAATTTATGGAGCCACTT
TAACTCTTTTATTTTATTTTTCTTCTTTTTATTTAAT
Protein sequenceShow/hide protein sequence
MATDDQLNNPPQPPPPAPSLPHYPEMIMTAIESLNDKNGVSKSAITKQIESTYGDLPPAFTTLLTHHLDVMKQTGQLLFVKNNYMKPDPNAPPKRGRGRPPKPKVPLPPG
TVVSPPRPRGRPPKPKDPFAPISQPKKKTTSGSGRPRGRPPKYPKPAPTSAPVAGPPRGRGRPPKVKPAVAPVGC