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Lsi09G006760 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi09G006760
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionDynein light chain
Genome locationchr09:7665027..7667887
RNA-Seq ExpressionLsi09G006760
SyntenyLsi09G006760
Gene Ontology termsGO:0007017 - microtubule-based process (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0005874 - microtubule (cellular component)
GO:0030286 - dynein complex (cellular component)
GO:0045505 - dynein intermediate chain binding (molecular function)
GO:0051959 - dynein light intermediate chain binding (molecular function)
InterPro domainsIPR001372 - Dynein light chain, type 1/2
IPR037177 - Dynein light chain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022146325.1 dynein light chain LC6, flagellar outer arm [Momordica charantia]4.9e-4497.83Show/hide
Query:  MPFPLQNRAFSCARELLDSMPGKLDSKRLALVLKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVYILLFKTAVEPLSRGTSLKD
        MPFPLQNRAFSCARELLDSMPGKLDSKR AL LKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVYILLFKTAVEPLSRGTSLKD
Subjt:  MPFPLQNRAFSCARELLDSMPGKLDSKRLALVLKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVYILLFKTAVEPLSRGTSLKD

XP_022939677.1 dynein light chain LC6, flagellar outer arm [Cucurbita moschata]8.3e-4497.83Show/hide
Query:  MPFPLQNRAFSCARELLDSMPGKLDSKRLALVLKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVYILLFKTAVEPLSRGTSLKD
        MPFPLQNRAFSCARELLDSMPGKLDSKRLAL LKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVYILLFKTAVEPLSRG SLKD
Subjt:  MPFPLQNRAFSCARELLDSMPGKLDSKRLALVLKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVYILLFKTAVEPLSRGTSLKD

XP_022973572.1 dynein light chain LC6, flagellar outer arm [Cucurbita maxima]8.3e-4497.83Show/hide
Query:  MPFPLQNRAFSCARELLDSMPGKLDSKRLALVLKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVYILLFKTAVEPLSRGTSLKD
        MPFPLQNRAFSCARELLDSMPGKLDSKRLAL LKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVYILLFKTAVEPLSRG SLKD
Subjt:  MPFPLQNRAFSCARELLDSMPGKLDSKRLALVLKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVYILLFKTAVEPLSRGTSLKD

XP_023551552.1 dynein light chain LC6, flagellar outer arm [Cucurbita pepo subsp. pepo]8.3e-4497.83Show/hide
Query:  MPFPLQNRAFSCARELLDSMPGKLDSKRLALVLKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVYILLFKTAVEPLSRGTSLKD
        MPFPLQNRAFSCARELLDSMPGKLDSKRLAL LKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVYILLFKTAVEPLSRG SLKD
Subjt:  MPFPLQNRAFSCARELLDSMPGKLDSKRLALVLKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVYILLFKTAVEPLSRGTSLKD

XP_038906759.1 dynein light chain LC6, flagellar outer arm [Benincasa hispida]1.7e-4498.91Show/hide
Query:  MPFPLQNRAFSCARELLDSMPGKLDSKRLALVLKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVYILLFKTAVEPLSRGTSLKD
        MPFPLQNRAFSCARELLDSMPGKLDSKRLAL LKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVYILLFKTAVEPLSRGTSLKD
Subjt:  MPFPLQNRAFSCARELLDSMPGKLDSKRLALVLKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVYILLFKTAVEPLSRGTSLKD

TrEMBL top hitse value%identityAlignment
A0A0A0KPF8 Dynein light chain2.6e-4396.74Show/hide
Query:  MPFPLQNRAFSCARELLDSMPGKLDSKRLALVLKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVYILLFKTAVEPLSRGTSLKD
        M FPLQNRAFSCARELLDSMPGKLDSKRLAL LKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVYILLFKTAVEPLSRG SLKD
Subjt:  MPFPLQNRAFSCARELLDSMPGKLDSKRLALVLKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVYILLFKTAVEPLSRGTSLKD

A0A1S3CSY6 Dynein light chain2.6e-4396.74Show/hide
Query:  MPFPLQNRAFSCARELLDSMPGKLDSKRLALVLKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVYILLFKTAVEPLSRGTSLKD
        M FPLQNRAFSCARELLDSMPGKLDSKRLAL LKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVYILLFKTAVEPLSRG SLKD
Subjt:  MPFPLQNRAFSCARELLDSMPGKLDSKRLALVLKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVYILLFKTAVEPLSRGTSLKD

A0A6J1CWZ8 Dynein light chain2.4e-4497.83Show/hide
Query:  MPFPLQNRAFSCARELLDSMPGKLDSKRLALVLKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVYILLFKTAVEPLSRGTSLKD
        MPFPLQNRAFSCARELLDSMPGKLDSKR AL LKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVYILLFKTAVEPLSRGTSLKD
Subjt:  MPFPLQNRAFSCARELLDSMPGKLDSKRLALVLKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVYILLFKTAVEPLSRGTSLKD

A0A6J1FHG9 Dynein light chain4.0e-4497.83Show/hide
Query:  MPFPLQNRAFSCARELLDSMPGKLDSKRLALVLKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVYILLFKTAVEPLSRGTSLKD
        MPFPLQNRAFSCARELLDSMPGKLDSKRLAL LKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVYILLFKTAVEPLSRG SLKD
Subjt:  MPFPLQNRAFSCARELLDSMPGKLDSKRLALVLKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVYILLFKTAVEPLSRGTSLKD

A0A6J1I7W2 Dynein light chain4.0e-4497.83Show/hide
Query:  MPFPLQNRAFSCARELLDSMPGKLDSKRLALVLKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVYILLFKTAVEPLSRGTSLKD
        MPFPLQNRAFSCARELLDSMPGKLDSKRLAL LKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVYILLFKTAVEPLSRG SLKD
Subjt:  MPFPLQNRAFSCARELLDSMPGKLDSKRLALVLKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVYILLFKTAVEPLSRGTSLKD

SwissProt top hitse value%identityAlignment
O02414 Dynein light chain LC6, flagellar outer arm7.1e-1446.84Show/hide
Query:  MPFPLQNRAFSCARELLDSMPGKLDSKRLALVLKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVYILLFKT
        MP  +Q  A  CA + L+    + D   +A  +KKEFD  Y P WHCIVG +FGSYVTH    F+YF + +V +LLFK+
Subjt:  MPFPLQNRAFSCARELLDSMPGKLDSKRLALVLKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVYILLFKT

O96860 Dynein light chain 2, cytoplasmic6.1e-1348Show/hide
Query:  LQNRAFSCARELLDSMPGKLDSKRLALVLKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVYILLFKT
        +Q  A  CA + L+    + D   +A  +KKEFD  Y P WHCIVG +FGSYVTH    F+YF + +V ILLFK+
Subjt:  LQNRAFSCARELLDSMPGKLDSKRLALVLKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVYILLFKT

Q22799 Dynein light chain 1, cytoplasmic4.6e-1348Show/hide
Query:  LQNRAFSCARELLDSMPGKLDSKRLALVLKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVYILLFKT
        +Q  A  CA + L+    + D   +A  +KKEFD  Y P WHCIVG +FGSYVTH    F+YF + +V ILLFK+
Subjt:  LQNRAFSCARELLDSMPGKLDSKRLALVLKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVYILLFKT

Q24117 Dynein light chain 1, cytoplasmic6.1e-1348Show/hide
Query:  LQNRAFSCARELLDSMPGKLDSKRLALVLKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVYILLFKT
        +Q  A  CA + L+    + D   +A  +KKEFD  Y P WHCIVG +FGSYVTH    F+YF + +V ILLFK+
Subjt:  LQNRAFSCARELLDSMPGKLDSKRLALVLKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVYILLFKT

Q86A88 Dynein light chain, cytoplasmic3.5e-1346.15Show/hide
Query:  MPFPLQNRAFSCARELLDSMPGKLDSKRLALVLKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVYILLFK
        MP  +Q  A  C  +  +    + D   +A+++KKEFD  Y P WHCIVG SFGS+VTH    F+YF+I+K  +LLFK
Subjt:  MPFPLQNRAFSCARELLDSMPGKLDSKRLALVLKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVYILLFK

Arabidopsis top hitse value%identityAlignment
AT1G23220.1 Dynein light chain type 1 family protein1.2e-3577.91Show/hide
Query:  MPFPLQNRAFSCARELLDSMPGKLDSKRLALVLKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVYILLFKTAVEPLSR
        MP P QNRAFS +RE+L++ PGK D+KRLA  LKK+FDS+YGPAWHCIVGTSFGSYVTHS GGFLYF IDKVY+LLFKTAVEPL +
Subjt:  MPFPLQNRAFSCARELLDSMPGKLDSKRLALVLKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVYILLFKTAVEPLSR

AT1G52240.2 RHO guanyl-nucleotide exchange factor 111.6e-1342.17Show/hide
Query:  MPFPLQNRAFSCARELLDSMPGKLDSKRLALVLKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVYILLFKTAVEP
        MP  +Q +A + A + LD +    D K +A  +KKEFD  YG  W C+VG++FG + THS G F+YF ++ +  L+FK A  P
Subjt:  MPFPLQNRAFSCARELLDSMPGKLDSKRLALVLKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVYILLFKTAVEP

AT3G16120.1 Dynein light chain type 1 family protein6.2e-1343.75Show/hide
Query:  MPFPLQNRAFSCARELLDSMPGKLDSKRLALVLKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVYILLFKTA
        MP  +Q +A   A + LD +    DS  +A  +KKEFD  YG  W C+VGT+FG + THS G F+YF +  +  L+FK A
Subjt:  MPFPLQNRAFSCARELLDSMPGKLDSKRLALVLKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVYILLFKTA

AT4G27360.1 Dynein light chain type 1 family protein4.8e-1346.75Show/hide
Query:  LQNRAFSCARELLDSMPGKLDSKRLALVLKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVYILLFKTAV
        ++  A S A + LD      +  ++A  +KKEFD SYG  W CIVGT FGS+VTH  G F++FS+  + ILLFK +V
Subjt:  LQNRAFSCARELLDSMPGKLDSKRLALVLKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVYILLFKTAV

AT5G20110.1 Dynein light chain type 1 family protein8.4e-2664.71Show/hide
Query:  MPFPLQNRAFSCARELLDSMPGKLDSKRLALVLKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVYILLFKTAVEPLS
        MP  +Q  AF CAR  LDS+  K  SK +A  LKKEFD  YGPAWHCIVG+SFGS+VTHS G F+YFS+DK+Y+LLFKT V P S
Subjt:  MPFPLQNRAFSCARELLDSMPGKLDSKRLALVLKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVYILLFKTAVEPLS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCGTTTCCTCTGCAGAATCGCGCTTTTAGTTGCGCTCGTGAACTGCTCGATTCGATGCCTGGGAAGCTCGATAGCAAACGTCTTGCTCTTGTCCTTAAAAAGGAATT
TGATTCCTCCTATGGTCCGGCTTGGCATTGCATTGTGGGAACTAGTTTTGGGTCCTATGTAACACATTCTCTGGGTGGGTTCTTGTATTTTTCAATAGATAAAGTTTATA
TCCTTCTCTTCAAAACAGCAGTGGAGCCTCTATCTCGTGGAACATCGTTGAAAGATTGA
mRNA sequenceShow/hide mRNA sequence
AAAGAAAAAAAAAGTTGGGTTTTGGTCGGTATCTAAGCACTAATTAACAATCAAGAAGTGGGAATTTCGTTGGATTTCGTCTTTGACCGATGCCGTGGTTCAAAGACAGA
ATCCCACAAACACCAACCGATTAAAATTCAATTTTTTTATTTTTATTTTTGTGTTGTAATTCCAACCCTCCCTTGGCATTGTCTTCCTCTCCTCGCGCCACTGTTTCTTT
TTTTCTTCCCCTTCCTCTTGTCTTCTTCTTTCTCCTGCCAGACACTCTGTCAAACACTTTACGGGCATCGTGTTTTAAATTTTCTGATTCTGAACCACTAAAGAAGAAGA
AGAAGGAGGAGGAGGAGGTGGGGTTGTTCTTTTGTAGATCTTTTCCCCCAATTTCATGAGATTATAGTGTTGGTGGGGGGTCATGGATGTAGCGGAAATGGAGCTTGAGT
GACGGAGCAAGTTTCTGAGTGGGCTTATTTTGAAGAAGAAGGCGGGGGAGCAGCAAGAGCAGCGTGATCATCTCAATGTTCGCGTTAGAGCCTCCGATATGCCGTTTCCT
CTGCAGAATCGCGCTTTTAGTTGCGCTCGTGAACTGCTCGATTCGATGCCTGGGAAGCTCGATAGCAAACGTCTTGCTCTTGTCCTTAAAAAGGAATTTGATTCCTCCTA
TGGTCCGGCTTGGCATTGCATTGTGGGAACTAGTTTTGGGTCCTATGTAACACATTCTCTGGGTGGGTTCTTGTATTTTTCAATAGATAAAGTTTATATCCTTCTCTTCA
AAACAGCAGTGGAGCCTCTATCTCGTGGAACATCGTTGAAAGATTGAGTTTCCCAATTGTAAACGAGGATCGAACTGGCATCAGATTGAAGTCATGAGCAAGAACAACCA
GGTTCAGCCATACTATTCTTTTTGGTTGTATCATTGATGTGAGTTGTGCATTAATTTTACTGGTTCATTATGAAATTTTTGTTGTGTGCAGTTCAACAGCAAGGATTTGT
GATGTTATAAGATTTTATTATATTCATGCTTTATTTTGGTTTGGGGGAGTAAATAAAAAGTTGCGCAACATCTCCATTTTTTTAATGTAGATATAATTTGCGGATAAATA
TTCGAATTCTGAAGTGTAATCTATC
Protein sequenceShow/hide protein sequence
MPFPLQNRAFSCARELLDSMPGKLDSKRLALVLKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVYILLFKTAVEPLSRGTSLKD