; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi09G006770 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi09G006770
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionF-box protein SKIP28
Genome locationchr09:7669591..7671649
RNA-Seq ExpressionLsi09G006770
SyntenyLsi09G006770
Gene Ontology termsGO:0005737 - cytoplasm (cellular component)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR001810 - F-box domain
IPR006553 - Leucine-rich repeat, cysteine-containing subtype
IPR017900 - 4Fe-4S ferredoxin, iron-sulphur binding, conserved site
IPR032675 - Leucine-rich repeat domain superfamily
IPR036047 - F-box-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046341.1 F-box protein SKIP28 isoform X1 [Cucumis melo var. makuwa]3.3e-12181.75Show/hide
Query:  MSENQEPPNPAAAAGTSSPGVRIEAGPPHEALFLVLSYLPLFELLSMSAVCVSLRDAVEHDVLPWLHIVIDRRLSSRLSDYTLGRIAQKAGGRLRTLALI
        MSENQEPPNPAA A         EAGPPHEALF V+SYL LFELLSMSAVCVSLRDAVEHDVLPWLHIV+D RLSSRLSDYTLGRIA+KAGGRLRTLALI
Subjt:  MSENQEPPNPAAAAGTSSPGVRIEAGPPHEALFLVLSYLPLFELLSMSAVCVSLRDAVEHDVLPWLHIVIDRRLSSRLSDYTLGRIAQKAGGRLRTLALI

Query:  NCFKISDSGLHEVVEKNPLLTKLYVPGCTSLTPEGVVRAVRTLSQHSHNLKSLMIGGIYHIENEHLEVLKCYLLENRSQ-QQQERQQHHHLYHERIDRSK
        +CFKISDSGLHEVVE NPLLTKLYVPGCTSLTP GVVRAV+T SQHSHNLK+LMIGGIY+IEN HLEVL+ +LLENRSQ +QQE +Q HHLYHE +DR  
Subjt:  NCFKISDSGLHEVVEKNPLLTKLYVPGCTSLTPEGVVRAVRTLSQHSHNLKSLMIGGIYHIENEHLEVLKCYLLENRSQ-QQQERQQHHHLYHERIDRSK

Query:  LLSNEFQPVIDVQICPKCFDIRSVYDCSRERCKIKREEQLLADCRGCICCVPRCEECGGCVDDDEIEEAVCAGL
        LLSN+F P+IDVQICPKC+DIR+VYDCSRERCKIK+ E LLADCRGCI C+PRCEECGGCVD DEIEEA+C G+
Subjt:  LLSNEFQPVIDVQICPKCFDIRSVYDCSRERCKIKREEQLLADCRGCICCVPRCEECGGCVDDDEIEEAVCAGL

XP_004150124.1 F-box protein SKIP28 [Cucumis sativus]2.7e-12380.71Show/hide
Query:  MSENQEPPNPAAAAGTSSPGVRIEAGPPHEALFLVLSYLPLFELLSMSAVCVSLRDAVEHDVLPWLHIVIDRRLSSRLSDYTLGRIAQKAGGRLRTLALI
        MSENQEPPNPA+ A         EAGPPHEALF V++YLPLFELLS+SAVCVSLRDAVEHDVLPWLHIV+D RLSSRLSDYTLGRIA+KA GRLRTLALI
Subjt:  MSENQEPPNPAAAAGTSSPGVRIEAGPPHEALFLVLSYLPLFELLSMSAVCVSLRDAVEHDVLPWLHIVIDRRLSSRLSDYTLGRIAQKAGGRLRTLALI

Query:  NCFKISDSGLHEVVEKNPLLTKLYVPGCTSLTPEGVVRAVRTLSQHSHNLKSLMIGGIYHIENEHLEVLKCYLLENRS-QQQQERQQHHHLYHERIDRSK
        NCFKISDSGLHEVVE NPLLTKLYVPGCTSLTPEGVVRAV+TLSQ SHNLK+LMIGGIY+IEN+HLEVL+ +LLENRS  +QQE +Q HHLYHE +DR +
Subjt:  NCFKISDSGLHEVVEKNPLLTKLYVPGCTSLTPEGVVRAVRTLSQHSHNLKSLMIGGIYHIENEHLEVLKCYLLENRS-QQQQERQQHHHLYHERIDRSK

Query:  LLSNEFQPVIDVQICPKCFDIRSVYDCSRERCKIKREEQLLADCRGCICCVPRCEECGGCVDDDEIEEAVCAGLQQDMLC
        LLS++F PVIDVQICPKC+DIR+VYDCSRERCKIK+ E LLADCRGCICC+PRCEECGGCVDDDEIEEA+C+    D+LC
Subjt:  LLSNEFQPVIDVQICPKCFDIRSVYDCSRERCKIKREEQLLADCRGCICCVPRCEECGGCVDDDEIEEAVCAGLQQDMLC

XP_008467113.1 PREDICTED: F-box protein SKIP28 isoform X2 [Cucumis melo]5.1e-12274.92Show/hide
Query:  MSENQEPPNPAAAAGTSSPGVRIEAGPPHEALFLVLSYLPLFELLSMSAVCVSLRDAVEHDVLPWLHIVIDRRLSSRLSDYTLGRIAQKAGGRLRTLALI
        MSENQEPPNPAA A         EAGPPHEALF V+SYL LFELLSMSAVCVSLRDAVEHDVLPWLHIV+D RLSSRLSDYTLGRIA+KAGGRLRTLALI
Subjt:  MSENQEPPNPAAAAGTSSPGVRIEAGPPHEALFLVLSYLPLFELLSMSAVCVSLRDAVEHDVLPWLHIVIDRRLSSRLSDYTLGRIAQKAGGRLRTLALI

Query:  NCFKISDSGLHEVVEKNPLLTKLYVPGCTSLTPEGVVRAVRTLSQHSHNLKSLMIGGIYHIENEHLEVLKCYLLENRSQ-QQQERQQHHHLYHERIDRSK
        +CFKISDSGLHEVVE NPLLTKLYVPGCTSLTP GVVRAV+T SQHSHNLK+LMIGGIY+IEN HLEVL+ +LLENRSQ +QQE +Q HHLYHE +DR  
Subjt:  NCFKISDSGLHEVVEKNPLLTKLYVPGCTSLTPEGVVRAVRTLSQHSHNLKSLMIGGIYHIENEHLEVLKCYLLENRSQ-QQQERQQHHHLYHERIDRSK

Query:  LLSNEFQPVIDVQICPKCFDIRSVYDCSRERCKIKREEQLLADCRGCICCVPRCEECGGCVDDDEIEEAVCAG---------------------------
        LLSN+F P+IDVQICPKC+DIR+VYDCSRERCKIK+ E LLADCRGCI C+PRCEECGGCVD DEIEEA+C G                           
Subjt:  LLSNEFQPVIDVQICPKCFDIRSVYDCSRERCKIKREEQLLADCRGCICCVPRCEECGGCVDDDEIEEAVCAG---------------------------

Query:  --LQQDMLCLN
          LQQDMLCLN
Subjt:  --LQQDMLCLN

XP_016903294.1 PREDICTED: F-box protein SKIP28 isoform X1 [Cucumis melo]3.3e-12181.75Show/hide
Query:  MSENQEPPNPAAAAGTSSPGVRIEAGPPHEALFLVLSYLPLFELLSMSAVCVSLRDAVEHDVLPWLHIVIDRRLSSRLSDYTLGRIAQKAGGRLRTLALI
        MSENQEPPNPAA A         EAGPPHEALF V+SYL LFELLSMSAVCVSLRDAVEHDVLPWLHIV+D RLSSRLSDYTLGRIA+KAGGRLRTLALI
Subjt:  MSENQEPPNPAAAAGTSSPGVRIEAGPPHEALFLVLSYLPLFELLSMSAVCVSLRDAVEHDVLPWLHIVIDRRLSSRLSDYTLGRIAQKAGGRLRTLALI

Query:  NCFKISDSGLHEVVEKNPLLTKLYVPGCTSLTPEGVVRAVRTLSQHSHNLKSLMIGGIYHIENEHLEVLKCYLLENRSQ-QQQERQQHHHLYHERIDRSK
        +CFKISDSGLHEVVE NPLLTKLYVPGCTSLTP GVVRAV+T SQHSHNLK+LMIGGIY+IEN HLEVL+ +LLENRSQ +QQE +Q HHLYHE +DR  
Subjt:  NCFKISDSGLHEVVEKNPLLTKLYVPGCTSLTPEGVVRAVRTLSQHSHNLKSLMIGGIYHIENEHLEVLKCYLLENRSQ-QQQERQQHHHLYHERIDRSK

Query:  LLSNEFQPVIDVQICPKCFDIRSVYDCSRERCKIKREEQLLADCRGCICCVPRCEECGGCVDDDEIEEAVCAGL
        LLSN+F P+IDVQICPKC+DIR+VYDCSRERCKIK+ E LLADCRGCI C+PRCEECGGCVD DEIEEA+C G+
Subjt:  LLSNEFQPVIDVQICPKCFDIRSVYDCSRERCKIKREEQLLADCRGCICCVPRCEECGGCVDDDEIEEAVCAGL

XP_038906463.1 F-box protein SKIP28 [Benincasa hispida]1.7e-13890.84Show/hide
Query:  MSENQEPPNPAAAAGTSSPGVRIEAGPPHEALFLVLSYLPLFELLSMSAVCVSLRDAVEHDVLPWLHIVIDRRLSSRLSDYTLGRIAQKAGGRLRTLALI
        MSENQEP NPAAAAG+S PGVRIEAGPPHEALFLVLSYLPLFELLSMS+VCVSLRDAVEHDVLPWLHIV+DRRLSSRLSDY LGRIA+KAGGRLRTLALI
Subjt:  MSENQEPPNPAAAAGTSSPGVRIEAGPPHEALFLVLSYLPLFELLSMSAVCVSLRDAVEHDVLPWLHIVIDRRLSSRLSDYTLGRIAQKAGGRLRTLALI

Query:  NCFKISDSGLHEVVEKNPLLTKLYVPGCTSLTPEGVVRAVRTLSQHSHNLKSLMIGGIYHIENEHLEVLKCYLLENRSQQQQERQQHHHLYHERIDRSKL
        NCFKISDSG HEVVEKNPLLTKLYVPGCTSLTP GVVRAV+TLSQHSHNLKSLMIGGIY+IENEHLEVLKC+LLENRS QQQE +Q HHLY E IDRSKL
Subjt:  NCFKISDSGLHEVVEKNPLLTKLYVPGCTSLTPEGVVRAVRTLSQHSHNLKSLMIGGIYHIENEHLEVLKCYLLENRSQQQQERQQHHHLYHERIDRSKL

Query:  LSNEFQPVIDVQICPKCFDIRSVYDCSRERCKIKREEQLLADCRGCICCVPRCEECGGCVDDDEIEEAVCAGL
        LSNEFQPVIDVQICPKC +IRSVYDCSRERCKIK+E+QLLADCRGCI C+PRCEECGGCVDDDEIEEAVCAG+
Subjt:  LSNEFQPVIDVQICPKCFDIRSVYDCSRERCKIKREEQLLADCRGCICCVPRCEECGGCVDDDEIEEAVCAGL

TrEMBL top hitse value%identityAlignment
A0A0A0KSU6 F-box domain-containing protein1.3e-12380.71Show/hide
Query:  MSENQEPPNPAAAAGTSSPGVRIEAGPPHEALFLVLSYLPLFELLSMSAVCVSLRDAVEHDVLPWLHIVIDRRLSSRLSDYTLGRIAQKAGGRLRTLALI
        MSENQEPPNPA+ A         EAGPPHEALF V++YLPLFELLS+SAVCVSLRDAVEHDVLPWLHIV+D RLSSRLSDYTLGRIA+KA GRLRTLALI
Subjt:  MSENQEPPNPAAAAGTSSPGVRIEAGPPHEALFLVLSYLPLFELLSMSAVCVSLRDAVEHDVLPWLHIVIDRRLSSRLSDYTLGRIAQKAGGRLRTLALI

Query:  NCFKISDSGLHEVVEKNPLLTKLYVPGCTSLTPEGVVRAVRTLSQHSHNLKSLMIGGIYHIENEHLEVLKCYLLENRS-QQQQERQQHHHLYHERIDRSK
        NCFKISDSGLHEVVE NPLLTKLYVPGCTSLTPEGVVRAV+TLSQ SHNLK+LMIGGIY+IEN+HLEVL+ +LLENRS  +QQE +Q HHLYHE +DR +
Subjt:  NCFKISDSGLHEVVEKNPLLTKLYVPGCTSLTPEGVVRAVRTLSQHSHNLKSLMIGGIYHIENEHLEVLKCYLLENRS-QQQQERQQHHHLYHERIDRSK

Query:  LLSNEFQPVIDVQICPKCFDIRSVYDCSRERCKIKREEQLLADCRGCICCVPRCEECGGCVDDDEIEEAVCAGLQQDMLC
        LLS++F PVIDVQICPKC+DIR+VYDCSRERCKIK+ E LLADCRGCICC+PRCEECGGCVDDDEIEEA+C+    D+LC
Subjt:  LLSNEFQPVIDVQICPKCFDIRSVYDCSRERCKIKREEQLLADCRGCICCVPRCEECGGCVDDDEIEEAVCAGLQQDMLC

A0A1S3CSR5 F-box protein SKIP28 isoform X22.5e-12274.92Show/hide
Query:  MSENQEPPNPAAAAGTSSPGVRIEAGPPHEALFLVLSYLPLFELLSMSAVCVSLRDAVEHDVLPWLHIVIDRRLSSRLSDYTLGRIAQKAGGRLRTLALI
        MSENQEPPNPAA A         EAGPPHEALF V+SYL LFELLSMSAVCVSLRDAVEHDVLPWLHIV+D RLSSRLSDYTLGRIA+KAGGRLRTLALI
Subjt:  MSENQEPPNPAAAAGTSSPGVRIEAGPPHEALFLVLSYLPLFELLSMSAVCVSLRDAVEHDVLPWLHIVIDRRLSSRLSDYTLGRIAQKAGGRLRTLALI

Query:  NCFKISDSGLHEVVEKNPLLTKLYVPGCTSLTPEGVVRAVRTLSQHSHNLKSLMIGGIYHIENEHLEVLKCYLLENRSQ-QQQERQQHHHLYHERIDRSK
        +CFKISDSGLHEVVE NPLLTKLYVPGCTSLTP GVVRAV+T SQHSHNLK+LMIGGIY+IEN HLEVL+ +LLENRSQ +QQE +Q HHLYHE +DR  
Subjt:  NCFKISDSGLHEVVEKNPLLTKLYVPGCTSLTPEGVVRAVRTLSQHSHNLKSLMIGGIYHIENEHLEVLKCYLLENRSQ-QQQERQQHHHLYHERIDRSK

Query:  LLSNEFQPVIDVQICPKCFDIRSVYDCSRERCKIKREEQLLADCRGCICCVPRCEECGGCVDDDEIEEAVCAG---------------------------
        LLSN+F P+IDVQICPKC+DIR+VYDCSRERCKIK+ E LLADCRGCI C+PRCEECGGCVD DEIEEA+C G                           
Subjt:  LLSNEFQPVIDVQICPKCFDIRSVYDCSRERCKIKREEQLLADCRGCICCVPRCEECGGCVDDDEIEEAVCAG---------------------------

Query:  --LQQDMLCLN
          LQQDMLCLN
Subjt:  --LQQDMLCLN

A0A1S4E4Z1 F-box protein SKIP28 isoform X11.6e-12181.75Show/hide
Query:  MSENQEPPNPAAAAGTSSPGVRIEAGPPHEALFLVLSYLPLFELLSMSAVCVSLRDAVEHDVLPWLHIVIDRRLSSRLSDYTLGRIAQKAGGRLRTLALI
        MSENQEPPNPAA A         EAGPPHEALF V+SYL LFELLSMSAVCVSLRDAVEHDVLPWLHIV+D RLSSRLSDYTLGRIA+KAGGRLRTLALI
Subjt:  MSENQEPPNPAAAAGTSSPGVRIEAGPPHEALFLVLSYLPLFELLSMSAVCVSLRDAVEHDVLPWLHIVIDRRLSSRLSDYTLGRIAQKAGGRLRTLALI

Query:  NCFKISDSGLHEVVEKNPLLTKLYVPGCTSLTPEGVVRAVRTLSQHSHNLKSLMIGGIYHIENEHLEVLKCYLLENRSQ-QQQERQQHHHLYHERIDRSK
        +CFKISDSGLHEVVE NPLLTKLYVPGCTSLTP GVVRAV+T SQHSHNLK+LMIGGIY+IEN HLEVL+ +LLENRSQ +QQE +Q HHLYHE +DR  
Subjt:  NCFKISDSGLHEVVEKNPLLTKLYVPGCTSLTPEGVVRAVRTLSQHSHNLKSLMIGGIYHIENEHLEVLKCYLLENRSQ-QQQERQQHHHLYHERIDRSK

Query:  LLSNEFQPVIDVQICPKCFDIRSVYDCSRERCKIKREEQLLADCRGCICCVPRCEECGGCVDDDEIEEAVCAGL
        LLSN+F P+IDVQICPKC+DIR+VYDCSRERCKIK+ E LLADCRGCI C+PRCEECGGCVD DEIEEA+C G+
Subjt:  LLSNEFQPVIDVQICPKCFDIRSVYDCSRERCKIKREEQLLADCRGCICCVPRCEECGGCVDDDEIEEAVCAGL

A0A5A7TYB5 F-box protein SKIP28 isoform X11.6e-12181.75Show/hide
Query:  MSENQEPPNPAAAAGTSSPGVRIEAGPPHEALFLVLSYLPLFELLSMSAVCVSLRDAVEHDVLPWLHIVIDRRLSSRLSDYTLGRIAQKAGGRLRTLALI
        MSENQEPPNPAA A         EAGPPHEALF V+SYL LFELLSMSAVCVSLRDAVEHDVLPWLHIV+D RLSSRLSDYTLGRIA+KAGGRLRTLALI
Subjt:  MSENQEPPNPAAAAGTSSPGVRIEAGPPHEALFLVLSYLPLFELLSMSAVCVSLRDAVEHDVLPWLHIVIDRRLSSRLSDYTLGRIAQKAGGRLRTLALI

Query:  NCFKISDSGLHEVVEKNPLLTKLYVPGCTSLTPEGVVRAVRTLSQHSHNLKSLMIGGIYHIENEHLEVLKCYLLENRSQ-QQQERQQHHHLYHERIDRSK
        +CFKISDSGLHEVVE NPLLTKLYVPGCTSLTP GVVRAV+T SQHSHNLK+LMIGGIY+IEN HLEVL+ +LLENRSQ +QQE +Q HHLYHE +DR  
Subjt:  NCFKISDSGLHEVVEKNPLLTKLYVPGCTSLTPEGVVRAVRTLSQHSHNLKSLMIGGIYHIENEHLEVLKCYLLENRSQ-QQQERQQHHHLYHERIDRSK

Query:  LLSNEFQPVIDVQICPKCFDIRSVYDCSRERCKIKREEQLLADCRGCICCVPRCEECGGCVDDDEIEEAVCAGL
        LLSN+F P+IDVQICPKC+DIR+VYDCSRERCKIK+ E LLADCRGCI C+PRCEECGGCVD DEIEEA+C G+
Subjt:  LLSNEFQPVIDVQICPKCFDIRSVYDCSRERCKIKREEQLLADCRGCICCVPRCEECGGCVDDDEIEEAVCAGL

A0A6J1FGL5 F-box protein SKIP281.6e-11678.02Show/hide
Query:  MSENQEPPNPAAAAGTSSPGVRIEAGPPHEALFLVLSYLPLFELLSMSAVCVSLRDAVEHDVLPWLHIVIDRRLSSRLSDYTLGRIAQKAGGRLRTLALI
        MSEN + PN  A  G+SSPGVRI AGPPHEALFLVLSYLPLFELLSM AVCVSLRDAV HDVLPWLH+V+DR LSSRL+DY LGRIA+KA GRLRTLALI
Subjt:  MSENQEPPNPAAAAGTSSPGVRIEAGPPHEALFLVLSYLPLFELLSMSAVCVSLRDAVEHDVLPWLHIVIDRRLSSRLSDYTLGRIAQKAGGRLRTLALI

Query:  NCFKISDSGLHEVVEKNPLLTKLYVPGCTSLTPEGVVRAVRTLSQHSHNLKSLMIGGIYHIENEHLEVLKCYLLENRSQQQQERQQHHHLYHERIDRSKL
        NCFKISDS LHEVVE NPLLTKLYVPGCTSLTPEGV+RAV TLSQHSHNL SLMIGGIY+IENEHLEVLK +LL+NRSQQQQ++QQ    +HE I+ SKL
Subjt:  NCFKISDSGLHEVVEKNPLLTKLYVPGCTSLTPEGVVRAVRTLSQHSHNLKSLMIGGIYHIENEHLEVLKCYLLENRSQQQQERQQHHHLYHERIDRSKL

Query:  LSNEFQPVIDVQICPKCFDIRSVYDCSRERCKIKREEQLLADCRGCICCVPRCEECGGCVDDDEIEEAVCAGL
        L N++  +IDV++CPKC +I  VYDCSRERCKIK+E++  A+CRGC  CVPRCEECGGCVD DE EEAVCAG+
Subjt:  LSNEFQPVIDVQICPKCFDIRSVYDCSRERCKIKREEQLLADCRGCICCVPRCEECGGCVDDDEIEEAVCAGL

SwissProt top hitse value%identityAlignment
A2RT62 F-box/LRR-repeat protein 162.0e-0429.17Show/hide
Query:  LSDYTLGRIAQKAGGRLRTLALINCFKISDSGLHEVVEKNPLLTKLYVPGCTSLTPEGVVRAVRTLSQHSHNLKSLMIGGIYHIENEHLEVLKCYL
        ++D  L     + G    TL L++C++I++ G+  VV   P LT L + GC+ +T +G    V  ++++   L+SL +     I +  LE + C L
Subjt:  LSDYTLGRIAQKAGGRLRTLALINCFKISDSGLHEVVEKNPLLTKLYVPGCTSLTPEGVVRAVRTLSQHSHNLKSLMIGGIYHIENEHLEVLKCYL

Q5MJ12 F-box/LRR-repeat protein 162.0e-0429.17Show/hide
Query:  LSDYTLGRIAQKAGGRLRTLALINCFKISDSGLHEVVEKNPLLTKLYVPGCTSLTPEGVVRAVRTLSQHSHNLKSLMIGGIYHIENEHLEVLKCYL
        ++D  L     + G    TL L++C++I++ G+  VV   P LT L + GC+ +T +G    V  ++++   L+SL +     I +  LE + C L
Subjt:  LSDYTLGRIAQKAGGRLRTLALINCFKISDSGLHEVVEKNPLLTKLYVPGCTSLTPEGVVRAVRTLSQHSHNLKSLMIGGIYHIENEHLEVLKCYL

Q9LK24 F-box protein At3g272903.1e-2936.36Show/hide
Query:  GPPHEALFLVLSYLPLFELLSMSAVCVSLRDAVEHDVLPWLHIVI-DRRLSSRLSDYTLGRIAQKAGGRLRTLALINCFKISDSGLHEVVEKNPLLTKLY
        G  H+A  LVL YL L E+L++  VC SLRD+V  +   W  I + D  L  R++D +L ++ ++A G +R L L  C  I+D GL +V+  NP LTKL 
Subjt:  GPPHEALFLVLSYLPLFELLSMSAVCVSLRDAVEHDVLPWLHIVI-DRRLSSRLSDYTLGRIAQKAGGRLRTLALINCFKISDSGLHEVVEKNPLLTKLY

Query:  VPGCTSLTPEGVVRAVRTL-SQHSHNLKSLMIGGIYHIENEHLEVLKCYLLENRSQQQQERQQHHHLYHERIDRSKLLSNEFQPVIDVQICPKCFDIRSV
        V GC  L+  G+V  +R L S +   +KSL+ GG  +   E  + L   L  +     QER++  +       RS+    E   V D++ICP C     V
Subjt:  VPGCTSLTPEGVVRAVRTL-SQHSHNLKSLMIGGIYHIENEHLEVLKCYLLENRSQQQQERQQHHHLYHERIDRSKLLSNEFQPVIDVQICPKCFDIRSV

Query:  YDCSRERCKIKRE-EQLLADCRGCICCVPRCEECGGCVDDDE
        +DC  + C +K +     + CR C+ C+ RC ECG C++D E
Subjt:  YDCSRERCKIKRE-EQLLADCRGCICCVPRCEECGGCVDDDE

Q9LU91 F-box protein SKIP145.1e-3232.39Show/hide
Query:  HEALFLVLSYLPLFELLSMSAVCVSLRDAVEHDVLPWLHIVIDRRLSSRLSDYTLGRIAQKAGGRLRTLALINCFKISDSGLHEVVEKNPLLTKLYVPGC
        H A+   L +L   +LLS+S VC SL   V  D L W HI I R L+ ++++  L  + ++A G ++ L +++C +I+D  L  VV +N  + K+ VPGC
Subjt:  HEALFLVLSYLPLFELLSMSAVCVSLRDAVEHDVLPWLHIVIDRRLSSRLSDYTLGRIAQKAGGRLRTLALINCFKISDSGLHEVVEKNPLLTKLYVPGC

Query:  TSLTPEGVVRAVRTL-SQHSHNLKSLMIGGIYHIENEHL-EVLKCYLLENRSQQQQERQQHHHLYHERIDRSKLLSNEFQPVIDVQICPKCFDIRSVYDC
        T +T +G++  +R L S     +K L + G++ +  +H  E++    ++N+ +Q  ++ + +H           +S +    +D+++CPKC + + VYDC
Subjt:  TSLTPEGVVRAVRTL-SQHSHNLKSLMIGGIYHIENEHL-EVLKCYLLENRSQQQQERQQHHHLYHERIDRSKLLSNEFQPVIDVQICPKCFDIRSVYDC

Query:  SRERCKIKREEQLLADCRGCICCVPRCEECGGCVDDDEIEEAVCAGL
          E CK K++     +CR C  C+ RC  CG C+ D E EE  C  L
Subjt:  SRERCKIKREEQLLADCRGCICCVPRCEECGGCVDDDEIEEAVCAGL

Q9ZU90 F-box protein SKIP286.9e-4539.61Show/hide
Query:  HEALFLVLSYL-PLFELLSMSAVCVSLRDAVEHDVLPWLHIVIDRRLSSRLSDYTLGRIAQKAGGRLRTLALINCFKISDSGLHEVVEKNPLLTKLYVPG
        HE L +VL YL  LFELLSM  V  SLRDA+  +   W  +VI+  LSSRL+D  L   + K+ G+L+TL L  C  +++ GL  VV+ NPL+TK+ VPG
Subjt:  HEALFLVLSYL-PLFELLSMSAVCVSLRDAVEHDVLPWLHIVIDRRLSSRLSDYTLGRIAQKAGGRLRTLALINCFKISDSGLHEVVEKNPLLTKLYVPG

Query:  CTSLTPEGVVRAVRTLSQHSHNLKSLMIGGIYHIENEHLEVLKCYLLENRSQQQQERQQHHHLYHERIDRSKLLSNEFQPVIDVQICPKCFDIRSVYDCS
        C+ LTPEG++  V +LS+++H L++L I G+     +HL  L  YL                                +  ID+++CPKC ++R +  CS
Subjt:  CTSLTPEGVVRAVRTLSQHSHNLKSLMIGGIYHIENEHLEVLKCYLLENRSQQQQERQQHHHLYHERIDRSKLLSNEFQPVIDVQICPKCFDIRSVYDCS

Query:  RERCKIKREEQLLADCRGCICCVPRCEECGGCV--DDDEIEEAVCAGLQQDMLCL
        RE C  K+ +     CRGC  C+PRC EC  C+   D E +EA C     D+LCL
Subjt:  RERCKIKREEQLLADCRGCICCVPRCEECGGCV--DDDEIEEAVCAGLQQDMLCL

Arabidopsis top hitse value%identityAlignment
AT2G01620.1 RNI-like superfamily protein4.9e-4639.61Show/hide
Query:  HEALFLVLSYL-PLFELLSMSAVCVSLRDAVEHDVLPWLHIVIDRRLSSRLSDYTLGRIAQKAGGRLRTLALINCFKISDSGLHEVVEKNPLLTKLYVPG
        HE L +VL YL  LFELLSM  V  SLRDA+  +   W  +VI+  LSSRL+D  L   + K+ G+L+TL L  C  +++ GL  VV+ NPL+TK+ VPG
Subjt:  HEALFLVLSYL-PLFELLSMSAVCVSLRDAVEHDVLPWLHIVIDRRLSSRLSDYTLGRIAQKAGGRLRTLALINCFKISDSGLHEVVEKNPLLTKLYVPG

Query:  CTSLTPEGVVRAVRTLSQHSHNLKSLMIGGIYHIENEHLEVLKCYLLENRSQQQQERQQHHHLYHERIDRSKLLSNEFQPVIDVQICPKCFDIRSVYDCS
        C+ LTPEG++  V +LS+++H L++L I G+     +HL  L  YL                                +  ID+++CPKC ++R +  CS
Subjt:  CTSLTPEGVVRAVRTLSQHSHNLKSLMIGGIYHIENEHLEVLKCYLLENRSQQQQERQQHHHLYHERIDRSKLLSNEFQPVIDVQICPKCFDIRSVYDCS

Query:  RERCKIKREEQLLADCRGCICCVPRCEECGGCV--DDDEIEEAVCAGLQQDMLCL
        RE C  K+ +     CRGC  C+PRC EC  C+   D E +EA C     D+LCL
Subjt:  RERCKIKREEQLLADCRGCICCVPRCEECGGCV--DDDEIEEAVCAGLQQDMLCL

AT3G26000.1 Ribonuclease inhibitor3.6e-3332.39Show/hide
Query:  HEALFLVLSYLPLFELLSMSAVCVSLRDAVEHDVLPWLHIVIDRRLSSRLSDYTLGRIAQKAGGRLRTLALINCFKISDSGLHEVVEKNPLLTKLYVPGC
        H A+   L +L   +LLS+S VC SL   V  D L W HI I R L+ ++++  L  + ++A G ++ L +++C +I+D  L  VV +N  + K+ VPGC
Subjt:  HEALFLVLSYLPLFELLSMSAVCVSLRDAVEHDVLPWLHIVIDRRLSSRLSDYTLGRIAQKAGGRLRTLALINCFKISDSGLHEVVEKNPLLTKLYVPGC

Query:  TSLTPEGVVRAVRTL-SQHSHNLKSLMIGGIYHIENEHL-EVLKCYLLENRSQQQQERQQHHHLYHERIDRSKLLSNEFQPVIDVQICPKCFDIRSVYDC
        T +T +G++  +R L S     +K L + G++ +  +H  E++    ++N+ +Q  ++ + +H           +S +    +D+++CPKC + + VYDC
Subjt:  TSLTPEGVVRAVRTL-SQHSHNLKSLMIGGIYHIENEHL-EVLKCYLLENRSQQQQERQQHHHLYHERIDRSKLLSNEFQPVIDVQICPKCFDIRSVYDC

Query:  SRERCKIKREEQLLADCRGCICCVPRCEECGGCVDDDEIEEAVCAGL
          E CK K++     +CR C  C+ RC  CG C+ D E EE  C  L
Subjt:  SRERCKIKREEQLLADCRGCICCVPRCEECGGCVDDDEIEEAVCAGL

AT3G27290.1 RNI-like superfamily protein2.2e-3036.36Show/hide
Query:  GPPHEALFLVLSYLPLFELLSMSAVCVSLRDAVEHDVLPWLHIVI-DRRLSSRLSDYTLGRIAQKAGGRLRTLALINCFKISDSGLHEVVEKNPLLTKLY
        G  H+A  LVL YL L E+L++  VC SLRD+V  +   W  I + D  L  R++D +L ++ ++A G +R L L  C  I+D GL +V+  NP LTKL 
Subjt:  GPPHEALFLVLSYLPLFELLSMSAVCVSLRDAVEHDVLPWLHIVI-DRRLSSRLSDYTLGRIAQKAGGRLRTLALINCFKISDSGLHEVVEKNPLLTKLY

Query:  VPGCTSLTPEGVVRAVRTL-SQHSHNLKSLMIGGIYHIENEHLEVLKCYLLENRSQQQQERQQHHHLYHERIDRSKLLSNEFQPVIDVQICPKCFDIRSV
        V GC  L+  G+V  +R L S +   +KSL+ GG  +   E  + L   L  +     QER++  +       RS+    E   V D++ICP C     V
Subjt:  VPGCTSLTPEGVVRAVRTL-SQHSHNLKSLMIGGIYHIENEHLEVLKCYLLENRSQQQQERQQHHHLYHERIDRSKLLSNEFQPVIDVQICPKCFDIRSV

Query:  YDCSRERCKIKRE-EQLLADCRGCICCVPRCEECGGCVDDDE
        +DC  + C +K +     + CR C+ C+ RC ECG C++D E
Subjt:  YDCSRERCKIKRE-EQLLADCRGCICCVPRCEECGGCVDDDE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACCAGACCAGAATCATCCTCGCCCTTCAATCGTTCTCCTCCATTCGACATGTCTGAGAATCAGGAACCACCCAATCCGGCGGCTGCCGCTGGCACTTCGTCTCCCGG
CGTTCGAATCGAAGCAGGGCCACCGCACGAGGCGTTATTTCTTGTACTGAGTTATCTTCCTCTCTTTGAGCTTCTTTCCATGAGCGCAGTCTGCGTATCGCTGAGAGACG
CAGTGGAACATGATGTGTTGCCGTGGCTTCACATCGTCATCGATCGGCGCTTGAGCTCCCGGCTATCCGATTACACTCTAGGGAGAATCGCCCAGAAGGCCGGTGGTCGC
CTTAGAACTTTGGCTTTGATCAACTGTTTCAAGATTTCAGATTCTGGACTTCACGAAGTTGTTGAGAAGAATCCTCTTCTCACCAAGCTTTATGTACCTGGATGCACGAG
TTTGACTCCTGAGGGGGTGGTTAGGGCAGTGAGGACTCTGTCTCAACATTCTCACAATTTGAAGAGCCTAATGATTGGTGGCATTTACCACATAGAGAACGAACACCTTG
AAGTCCTCAAATGCTATCTTCTCGAAAACCGATCGCAGCAGCAGCAGGAGCGGCAACAACATCATCACCTGTACCATGAGCGCATTGACCGATCGAAGTTGTTGAGTAAC
GAATTCCAGCCAGTGATTGATGTACAAATCTGCCCAAAATGCTTTGACATAAGAAGTGTTTATGATTGCTCAAGGGAGAGATGCAAGATAAAGCGAGAGGAGCAATTACT
GGCAGATTGTCGGGGTTGCATTTGTTGCGTTCCAAGGTGTGAAGAATGCGGTGGATGCGTCGATGATGATGAAATAGAAGAGGCTGTATGTGCAGGGCTGCAACAAGATA
TGCTTTGTTTGAACAGGGAAATGTACATTTTTGCTGTATAA
mRNA sequenceShow/hide mRNA sequence
ATTTGATTATATATCATATAACACTAACTCATTCAAACGAAAATCCTCTGTTGATAATTTTCTTAGAAAAAAAATCCACCACTGATAATTGATTCTCTCTCAATTGTAAA
TTCTCAATTTCATTACCGGAACTCATCGACGTCCTCAGATGACCAGACCAGAATCATCCTCGCCCTTCAATCGTTCTCCTCCATTCGACATGTCTGAGAATCAGGAACCA
CCCAATCCGGCGGCTGCCGCTGGCACTTCGTCTCCCGGCGTTCGAATCGAAGCAGGGCCACCGCACGAGGCGTTATTTCTTGTACTGAGTTATCTTCCTCTCTTTGAGCT
TCTTTCCATGAGCGCAGTCTGCGTATCGCTGAGAGACGCAGTGGAACATGATGTGTTGCCGTGGCTTCACATCGTCATCGATCGGCGCTTGAGCTCCCGGCTATCCGATT
ACACTCTAGGGAGAATCGCCCAGAAGGCCGGTGGTCGCCTTAGAACTTTGGCTTTGATCAACTGTTTCAAGATTTCAGATTCTGGACTTCACGAAGTTGTTGAGAAGAAT
CCTCTTCTCACCAAGCTTTATGTACCTGGATGCACGAGTTTGACTCCTGAGGGGGTGGTTAGGGCAGTGAGGACTCTGTCTCAACATTCTCACAATTTGAAGAGCCTAAT
GATTGGTGGCATTTACCACATAGAGAACGAACACCTTGAAGTCCTCAAATGCTATCTTCTCGAAAACCGATCGCAGCAGCAGCAGGAGCGGCAACAACATCATCACCTGT
ACCATGAGCGCATTGACCGATCGAAGTTGTTGAGTAACGAATTCCAGCCAGTGATTGATGTACAAATCTGCCCAAAATGCTTTGACATAAGAAGTGTTTATGATTGCTCA
AGGGAGAGATGCAAGATAAAGCGAGAGGAGCAATTACTGGCAGATTGTCGGGGTTGCATTTGTTGCGTTCCAAGGTGTGAAGAATGCGGTGGATGCGTCGATGATGATGA
AATAGAAGAGGCTGTATGTGCAGGGCTGCAACAAGATATGCTTTGTTTGAACAGGGAAATGTACATTTTTGCTGTATAA
Protein sequenceShow/hide protein sequence
MTRPESSSPFNRSPPFDMSENQEPPNPAAAAGTSSPGVRIEAGPPHEALFLVLSYLPLFELLSMSAVCVSLRDAVEHDVLPWLHIVIDRRLSSRLSDYTLGRIAQKAGGR
LRTLALINCFKISDSGLHEVVEKNPLLTKLYVPGCTSLTPEGVVRAVRTLSQHSHNLKSLMIGGIYHIENEHLEVLKCYLLENRSQQQQERQQHHHLYHERIDRSKLLSN
EFQPVIDVQICPKCFDIRSVYDCSRERCKIKREEQLLADCRGCICCVPRCEECGGCVDDDEIEEAVCAGLQQDMLCLNREMYIFAV