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Lsi09G006860 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi09G006860
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr09:7794919..7795152
RNA-Seq ExpressionLsi09G006860
SyntenyLsi09G006860
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8648597.1 hypothetical protein Csa_008169, partial [Cucumis sativus]1.1e-2084.06Show/hide
Query:  ATAAGDSDSDVSQLPIHSQVEKIKKEIEKIKHPSLQQSEMNTHLLLRGISISKPRSRSPLGLAAERPIS
        + AA DSDS+VS LPIHSQVEKIKKEIEKIKHPSLQQS+MNTHLLLRGISISKPRSRSPLGL ++  IS
Subjt:  ATAAGDSDSDVSQLPIHSQVEKIKKEIEKIKHPSLQQSEMNTHLLLRGISISKPRSRSPLGLAAERPIS

XP_011655448.1 uncharacterized protein LOC105435535 [Cucumis sativus]1.2e-2284.72Show/hide
Query:  ATAAGDSDSDVSQLPIHSQVEKIKKEIEKIKHPSLQQSEMNTHLLLRGISISKPRSRSPLGLAAERPISVGN
        + AA DSDS+VS LPIHSQVEKIKKEIEKIKHPSLQQS+MNTHLLLRGISISKPRSRSPLGL ++  ISVGN
Subjt:  ATAAGDSDSDVSQLPIHSQVEKIKKEIEKIKHPSLQQSEMNTHLLLRGISISKPRSRSPLGLAAERPISVGN

XP_016903705.1 PREDICTED: uncharacterized protein LOC103504534 [Cucumis melo]2.1e-2487.5Show/hide
Query:  ATAAGDSDSDVSQLPIHSQVEKIKKEIEKIKHPSLQQSEMNTHLLLRGISISKPRSRSPLGLAAERPISVGN
        +TAA DSDS+VSQ+PIHSQVEKIKKEIEKIKHPSLQQS+MNTHLLLRGISISKPRSRSPLGL ++ PISVGN
Subjt:  ATAAGDSDSDVSQLPIHSQVEKIKKEIEKIKHPSLQQSEMNTHLLLRGISISKPRSRSPLGLAAERPISVGN

XP_022146403.1 uncharacterized protein LOC111015628 [Momordica charantia]4.9e-2185.51Show/hide
Query:  AGDSDSDVSQLPIHSQVEKIKKEIEKIKHPSLQQSEMNTHLLLRGISISKPRSRSPLGLAAERPISVGN
        AGD DSD +Q+P+H QV KIK+EIEKIKHPSLQQSEM THLLLRGISISK RSRSPLGLAAERPISVGN
Subjt:  AGDSDSDVSQLPIHSQVEKIKKEIEKIKHPSLQQSEMNTHLLLRGISISKPRSRSPLGLAAERPISVGN

XP_038875254.1 uncharacterized protein LOC120067758 [Benincasa hispida]1.7e-2994.81Show/hide
Query:  MENATATAAGDSDSDVSQLPIHSQVEKIKKEIEKIKHPSLQQSEMNTHLLLRGISISKPRSRSPLGLAAERPISVGN
        M N T TAAGDSDSDVSQLPIHSQV+KIKKEIEKIKHPSLQQSEMNTHLLLRGISISKPRSRSPLGLAAERPISVGN
Subjt:  MENATATAAGDSDSDVSQLPIHSQVEKIKKEIEKIKHPSLQQSEMNTHLLLRGISISKPRSRSPLGLAAERPISVGN

TrEMBL top hitse value%identityAlignment
A0A0A0KPB9 Uncharacterized protein5.6e-2384.72Show/hide
Query:  ATAAGDSDSDVSQLPIHSQVEKIKKEIEKIKHPSLQQSEMNTHLLLRGISISKPRSRSPLGLAAERPISVGN
        + AA DSDS+VS LPIHSQVEKIKKEIEKIKHPSLQQS+MNTHLLLRGISISKPRSRSPLGL ++  ISVGN
Subjt:  ATAAGDSDSDVSQLPIHSQVEKIKKEIEKIKHPSLQQSEMNTHLLLRGISISKPRSRSPLGLAAERPISVGN

A0A1S4E6T1 uncharacterized protein LOC1035045341.0e-2487.5Show/hide
Query:  ATAAGDSDSDVSQLPIHSQVEKIKKEIEKIKHPSLQQSEMNTHLLLRGISISKPRSRSPLGLAAERPISVGN
        +TAA DSDS+VSQ+PIHSQVEKIKKEIEKIKHPSLQQS+MNTHLLLRGISISKPRSRSPLGL ++ PISVGN
Subjt:  ATAAGDSDSDVSQLPIHSQVEKIKKEIEKIKHPSLQQSEMNTHLLLRGISISKPRSRSPLGLAAERPISVGN

A0A5A7TYE7 Uncharacterized protein1.0e-2487.5Show/hide
Query:  ATAAGDSDSDVSQLPIHSQVEKIKKEIEKIKHPSLQQSEMNTHLLLRGISISKPRSRSPLGLAAERPISVGN
        +TAA DSDS+VSQ+PIHSQVEKIKKEIEKIKHPSLQQS+MNTHLLLRGISISKPRSRSPLGL ++ PISVGN
Subjt:  ATAAGDSDSDVSQLPIHSQVEKIKKEIEKIKHPSLQQSEMNTHLLLRGISISKPRSRSPLGLAAERPISVGN

A0A6J1CYH4 uncharacterized protein LOC1110156282.4e-2185.51Show/hide
Query:  AGDSDSDVSQLPIHSQVEKIKKEIEKIKHPSLQQSEMNTHLLLRGISISKPRSRSPLGLAAERPISVGN
        AGD DSD +Q+P+H QV KIK+EIEKIKHPSLQQSEM THLLLRGISISK RSRSPLGLAAERPISVGN
Subjt:  AGDSDSDVSQLPIHSQVEKIKKEIEKIKHPSLQQSEMNTHLLLRGISISKPRSRSPLGLAAERPISVGN

A0A6J1E1V2 uncharacterized protein LOC111430025 isoform X12.2e-1975.32Show/hide
Query:  MENATATAAGDSDSDVSQLPIHSQVEKIKKEIEKIKHPSLQQSEMNTHLLLRGISISKPRSRSPLGLAAERPISVGN
        MEN+TA A    D   SQ P+H QV KIK+EIEKIKHPSLQQSEM+THLLLR +SISKPR RSPLGLAAER ISVGN
Subjt:  MENATATAAGDSDSDVSQLPIHSQVEKIKKEIEKIKHPSLQQSEMNTHLLLRGISISKPRSRSPLGLAAERPISVGN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G24600.1 unknown protein6.6e-0862.07Show/hide
Query:  IHSQVEKIKKEIEKIKHPSLQQSEMNTHLLLRGISISKPRSRSPLGLA-AERPISVGN
        IHSQV KIK+E EKI+HPSL+Q EM   L+ R I +   RSRSPLGL   ER I VGN
Subjt:  IHSQVEKIKKEIEKIKHPSLQQSEMNTHLLLRGISISKPRSRSPLGLA-AERPISVGN

AT1G67920.1 unknown protein3.5e-0957.14Show/hide
Query:  MENATATAAGDSDSDVSQLPIHSQVEKIKKEIEKIKHPSLQQSEMNTHLLLRGISISKPRSRSPLGLAAERPISVGN
        MEN T    G+ D  +    IHSQVEKIKKE EKI+ PSLQQ EM    +L  I   + RSRSPLGL  ER ISVGN
Subjt:  MENATATAAGDSDSDVSQLPIHSQVEKIKKEIEKIKHPSLQQSEMNTHLLLRGISISKPRSRSPLGLAAERPISVGN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAACGCGACGGCGACGGCGGCCGGCGATTCCGATTCTGACGTTTCTCAGCTTCCGATTCACAGCCAAGTTGAGAAGATCAAGAAGGAGATTGAGAAGATCAAGCA
TCCTTCCCTTCAGCAATCCGAGATGAACACTCACCTTCTTCTTCGCGGTATCTCGATTTCGAAGCCGCGATCTCGCTCTCCGCTAGGGCTTGCCGCCGAGAGGCCTATTT
CCGTCGGGAATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGAACGCGACGGCGACGGCGGCCGGCGATTCCGATTCTGACGTTTCTCAGCTTCCGATTCACAGCCAAGTTGAGAAGATCAAGAAGGAGATTGAGAAGATCAAGCA
TCCTTCCCTTCAGCAATCCGAGATGAACACTCACCTTCTTCTTCGCGGTATCTCGATTTCGAAGCCGCGATCTCGCTCTCCGCTAGGGCTTGCCGCCGAGAGGCCTATTT
CCGTCGGGAATTAA
Protein sequenceShow/hide protein sequence
MENATATAAGDSDSDVSQLPIHSQVEKIKKEIEKIKHPSLQQSEMNTHLLLRGISISKPRSRSPLGLAAERPISVGN