; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi09G007020 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi09G007020
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionB box-type domain-containing protein
Genome locationchr09:7962579..7964679
RNA-Seq ExpressionLsi09G007020
SyntenyLsi09G007020
Gene Ontology termsGO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR000315 - B-box-type zinc finger


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004142823.1 uncharacterized protein LOC101210438 [Cucumis sativus]2.6e-8372.44Show/hide
Query:  MAGCKIYLKKRKTDWLNSLLQSKFFGSCVHHQNNRKNEKNVFCIDCGIAICRHCLISHCVHRRLQICKYVYQYVVRVPDLQNHLDCCNIQ----------
        MAGCKIYLKKRKTDWLNSLLQSKFFGSCVHHQNNRKNEKNVFCIDCGIAICRHCLISHCVHRRLQICKYVYQYVVRVPDLQ+HLDCCNIQ          
Subjt:  MAGCKIYLKKRKTDWLNSLLQSKFFGSCVHHQNNRKNEKNVFCIDCGIAICRHCLISHCVHRRLQICKYVYQYVVRVPDLQNHLDCCNIQ----------

Query:  -------------------------------------------VSMVPVELNNQSCRYIDLESNLKDIPWKENHNLETNTSEMESSSISVAESTEEIKAW
                                                   VSMVP+ELNNQ CR++D E NLKDIPWKENHNLE NTSEMESSSISVAESTEEIKAW
Subjt:  -------------------------------------------VSMVPVELNNQSCRYIDLESNLKDIPWKENHNLETNTSEMESSSISVAESTEEIKAW

Query:  RVKTVLNPKKLLHKRKGIPHRSPLK
        RVK VLNPKKLLHKRKGIPHRSPLK
Subjt:  RVKTVLNPKKLLHKRKGIPHRSPLK

XP_008467074.1 PREDICTED: uncharacterized protein LOC103504510 [Cucumis melo]2.4e-8472.89Show/hide
Query:  MAGCKIYLKKRKTDWLNSLLQSKFFGSCVHHQNNRKNEKNVFCIDCGIAICRHCLISHCVHRRLQICKYVYQYVVRVPDLQNHLDCCNIQ----------
        MAGCKI+LKKRKTDWLNSLLQSKFFGSCVHHQNNRKNEKNVFCIDCGIAICRHCLISHCVHRRLQICKYVYQYVVRVPDLQ+HLDCCNIQ          
Subjt:  MAGCKIYLKKRKTDWLNSLLQSKFFGSCVHHQNNRKNEKNVFCIDCGIAICRHCLISHCVHRRLQICKYVYQYVVRVPDLQNHLDCCNIQ----------

Query:  -------------------------------------------VSMVPVELNNQSCRYIDLESNLKDIPWKENHNLETNTSEMESSSISVAESTEEIKAW
                                                   VSMVP+ELNNQ CR+ID ESNLKDIPWKENHNLE NTSEMESSSISVAESTEEIKAW
Subjt:  -------------------------------------------VSMVPVELNNQSCRYIDLESNLKDIPWKENHNLETNTSEMESSSISVAESTEEIKAW

Query:  RVKTVLNPKKLLHKRKGIPHRSPLK
        RVKT+LNPKKLLHKRKGIPHRSPLK
Subjt:  RVKTVLNPKKLLHKRKGIPHRSPLK

XP_022963423.1 uncharacterized protein LOC111463631 [Cucurbita moschata]7.7e-7567.11Show/hide
Query:  MAGCKIYLKKRKTDWLNSLLQSKFFGSCVHHQNNRKNEKNVFCIDCGIAICRHCLISHCVHRRLQICKYVYQYVVRVPDLQNHLDCCNIQ----------
        MAGCKIYLKKRK DWL+SLLQSKFFGSCVHHQNNRKNEKNVFCIDCGIAICRHCLISHC+HRRLQICKYVYQYVVRVPDLQNHLDCCNIQ          
Subjt:  MAGCKIYLKKRKTDWLNSLLQSKFFGSCVHHQNNRKNEKNVFCIDCGIAICRHCLISHCVHRRLQICKYVYQYVVRVPDLQNHLDCCNIQ----------

Query:  -------------------------------------------VSMVPVELNNQSCRYIDLESNLKDIPWKENHNLETNTSEMESSSISVAESTEEIKAW
                                                   VSMVPVELNNQSCR I  +S+  +I WKENHN+E NTSEM+ SSIS+AESTEEIKAW
Subjt:  -------------------------------------------VSMVPVELNNQSCRYIDLESNLKDIPWKENHNLETNTSEMESSSISVAESTEEIKAW

Query:  RVKTVLNPKKLLHKRKGIPHRSPLK
        +VK+ LNP+KLLHKRKGIPHRSPLK
Subjt:  RVKTVLNPKKLLHKRKGIPHRSPLK

XP_022990994.1 uncharacterized protein LOC111487719 [Cucurbita maxima]6.5e-7466.67Show/hide
Query:  MAGCKIYLKKRKTDWLNSLLQSKFFGSCVHHQNNRKNEKNVFCIDCGIAICRHCLISHCVHRRLQICKYVYQYVVRVPDLQNHLDCCNIQ----------
        MAGCKIYLKKRK DWL+SLLQSKFFGSCVHHQNNRKNEKNVFCIDCGIAICRHCLISHC+HRRLQICKYVYQYVVRVPDLQNHLDCCNIQ          
Subjt:  MAGCKIYLKKRKTDWLNSLLQSKFFGSCVHHQNNRKNEKNVFCIDCGIAICRHCLISHCVHRRLQICKYVYQYVVRVPDLQNHLDCCNIQ----------

Query:  -------------------------------------------VSMVPVELNNQSCRYIDLESNLKDIPWKENHNLETNTSEMESSSISVAESTEEIKAW
                                                   VSMV VELNNQSCR I  +S+  +I WKENHN+E NTSEM+ SSIS+AESTEEIKAW
Subjt:  -------------------------------------------VSMVPVELNNQSCRYIDLESNLKDIPWKENHNLETNTSEMESSSISVAESTEEIKAW

Query:  RVKTVLNPKKLLHKRKGIPHRSPLK
        +VK+ LNP+KLLHKRKGIPHRSPLK
Subjt:  RVKTVLNPKKLLHKRKGIPHRSPLK

XP_038875225.1 uncharacterized protein LOC120067735 [Benincasa hispida]6.5e-8272.89Show/hide
Query:  MAGCKIYLKKRKTDWLNSLLQSKFFGSCVHHQNNRKNEKNVFCIDCGIAICRHCLISHCVHRRLQICKYVYQYVVRVPDLQNHLDCCNIQ----------
        MAGCKIYLKKRKTDWLNSLLQSKFFGSCVHHQNNRKNEKNVFCIDCGIAICRHCLISHCVH+RLQICKYVYQYVVRVPDLQN LDCCNIQ          
Subjt:  MAGCKIYLKKRKTDWLNSLLQSKFFGSCVHHQNNRKNEKNVFCIDCGIAICRHCLISHCVHRRLQICKYVYQYVVRVPDLQNHLDCCNIQ----------

Query:  -------------------------------------------VSMVPVELNNQSCRYIDLESNLKDIPWKENHNLETNTSEMESSSISVAESTEEIKAW
                                                   VSMVPVELNNQ+CR ID ESNLK IPW ENHNLETNTSEMESSSISVAESTEEIKAW
Subjt:  -------------------------------------------VSMVPVELNNQSCRYIDLESNLKDIPWKENHNLETNTSEMESSSISVAESTEEIKAW

Query:  RVKTVLNPKKLLHKRKGIPHRSPLK
        RVKTVLNPKKLLHKRKGIPHRS LK
Subjt:  RVKTVLNPKKLLHKRKGIPHRSPLK

TrEMBL top hitse value%identityAlignment
A0A0A0KPD0 B box-type domain-containing protein1.3e-8372.44Show/hide
Query:  MAGCKIYLKKRKTDWLNSLLQSKFFGSCVHHQNNRKNEKNVFCIDCGIAICRHCLISHCVHRRLQICKYVYQYVVRVPDLQNHLDCCNIQ----------
        MAGCKIYLKKRKTDWLNSLLQSKFFGSCVHHQNNRKNEKNVFCIDCGIAICRHCLISHCVHRRLQICKYVYQYVVRVPDLQ+HLDCCNIQ          
Subjt:  MAGCKIYLKKRKTDWLNSLLQSKFFGSCVHHQNNRKNEKNVFCIDCGIAICRHCLISHCVHRRLQICKYVYQYVVRVPDLQNHLDCCNIQ----------

Query:  -------------------------------------------VSMVPVELNNQSCRYIDLESNLKDIPWKENHNLETNTSEMESSSISVAESTEEIKAW
                                                   VSMVP+ELNNQ CR++D E NLKDIPWKENHNLE NTSEMESSSISVAESTEEIKAW
Subjt:  -------------------------------------------VSMVPVELNNQSCRYIDLESNLKDIPWKENHNLETNTSEMESSSISVAESTEEIKAW

Query:  RVKTVLNPKKLLHKRKGIPHRSPLK
        RVK VLNPKKLLHKRKGIPHRSPLK
Subjt:  RVKTVLNPKKLLHKRKGIPHRSPLK

A0A1S3CSV3 uncharacterized protein LOC1035045101.2e-8472.89Show/hide
Query:  MAGCKIYLKKRKTDWLNSLLQSKFFGSCVHHQNNRKNEKNVFCIDCGIAICRHCLISHCVHRRLQICKYVYQYVVRVPDLQNHLDCCNIQ----------
        MAGCKI+LKKRKTDWLNSLLQSKFFGSCVHHQNNRKNEKNVFCIDCGIAICRHCLISHCVHRRLQICKYVYQYVVRVPDLQ+HLDCCNIQ          
Subjt:  MAGCKIYLKKRKTDWLNSLLQSKFFGSCVHHQNNRKNEKNVFCIDCGIAICRHCLISHCVHRRLQICKYVYQYVVRVPDLQNHLDCCNIQ----------

Query:  -------------------------------------------VSMVPVELNNQSCRYIDLESNLKDIPWKENHNLETNTSEMESSSISVAESTEEIKAW
                                                   VSMVP+ELNNQ CR+ID ESNLKDIPWKENHNLE NTSEMESSSISVAESTEEIKAW
Subjt:  -------------------------------------------VSMVPVELNNQSCRYIDLESNLKDIPWKENHNLETNTSEMESSSISVAESTEEIKAW

Query:  RVKTVLNPKKLLHKRKGIPHRSPLK
        RVKT+LNPKKLLHKRKGIPHRSPLK
Subjt:  RVKTVLNPKKLLHKRKGIPHRSPLK

A0A6J1CYJ3 uncharacterized protein LOC111015643 isoform X13.2e-7164.89Show/hide
Query:  MAGCKIYLKKRKTDWLNSLLQSKFFGSCVHHQNNRKNEKNVFCIDCGIAICRHCLISHCVHRRLQICKYVYQYVVRVPDLQNHLDCCNIQ----------
        MAGCKIYLKKRK DWL+SLLQSKFFGSC HHQNNRKNEKNVFC+DCG+AICRHCLISHC+HRRLQICKYVYQYVVRV DLQNHLDCCNIQ          
Subjt:  MAGCKIYLKKRKTDWLNSLLQSKFFGSCVHHQNNRKNEKNVFCIDCGIAICRHCLISHCVHRRLQICKYVYQYVVRVPDLQNHLDCCNIQ----------

Query:  -------------------------------------------VSMVPVELNNQSCRYIDLESNLKDIPWKENHNLETNTSEMESSSISVAESTEEIKAW
                                                   VSM PVELN+QS R++  E NLKD+  KENHN ETNTSE+E SSIS+AESTEEIKAW
Subjt:  -------------------------------------------VSMVPVELNNQSCRYIDLESNLKDIPWKENHNLETNTSEMESSSISVAESTEEIKAW

Query:  RVKTVLNPKKLLHKRKGIPHRSPLK
        R K+ LN KKLLHKRKGIPHRSPLK
Subjt:  RVKTVLNPKKLLHKRKGIPHRSPLK

A0A6J1HHR7 uncharacterized protein LOC1114636313.7e-7567.11Show/hide
Query:  MAGCKIYLKKRKTDWLNSLLQSKFFGSCVHHQNNRKNEKNVFCIDCGIAICRHCLISHCVHRRLQICKYVYQYVVRVPDLQNHLDCCNIQ----------
        MAGCKIYLKKRK DWL+SLLQSKFFGSCVHHQNNRKNEKNVFCIDCGIAICRHCLISHC+HRRLQICKYVYQYVVRVPDLQNHLDCCNIQ          
Subjt:  MAGCKIYLKKRKTDWLNSLLQSKFFGSCVHHQNNRKNEKNVFCIDCGIAICRHCLISHCVHRRLQICKYVYQYVVRVPDLQNHLDCCNIQ----------

Query:  -------------------------------------------VSMVPVELNNQSCRYIDLESNLKDIPWKENHNLETNTSEMESSSISVAESTEEIKAW
                                                   VSMVPVELNNQSCR I  +S+  +I WKENHN+E NTSEM+ SSIS+AESTEEIKAW
Subjt:  -------------------------------------------VSMVPVELNNQSCRYIDLESNLKDIPWKENHNLETNTSEMESSSISVAESTEEIKAW

Query:  RVKTVLNPKKLLHKRKGIPHRSPLK
        +VK+ LNP+KLLHKRKGIPHRSPLK
Subjt:  RVKTVLNPKKLLHKRKGIPHRSPLK

A0A6J1JTJ5 uncharacterized protein LOC1114877193.1e-7466.67Show/hide
Query:  MAGCKIYLKKRKTDWLNSLLQSKFFGSCVHHQNNRKNEKNVFCIDCGIAICRHCLISHCVHRRLQICKYVYQYVVRVPDLQNHLDCCNIQ----------
        MAGCKIYLKKRK DWL+SLLQSKFFGSCVHHQNNRKNEKNVFCIDCGIAICRHCLISHC+HRRLQICKYVYQYVVRVPDLQNHLDCCNIQ          
Subjt:  MAGCKIYLKKRKTDWLNSLLQSKFFGSCVHHQNNRKNEKNVFCIDCGIAICRHCLISHCVHRRLQICKYVYQYVVRVPDLQNHLDCCNIQ----------

Query:  -------------------------------------------VSMVPVELNNQSCRYIDLESNLKDIPWKENHNLETNTSEMESSSISVAESTEEIKAW
                                                   VSMV VELNNQSCR I  +S+  +I WKENHN+E NTSEM+ SSIS+AESTEEIKAW
Subjt:  -------------------------------------------VSMVPVELNNQSCRYIDLESNLKDIPWKENHNLETNTSEMESSSISVAESTEEIKAW

Query:  RVKTVLNPKKLLHKRKGIPHRSPLK
        +VK+ LNP+KLLHKRKGIPHRSPLK
Subjt:  RVKTVLNPKKLLHKRKGIPHRSPLK

SwissProt top hitse value%identityAlignment
Q1G3Q4 Protein RGF1 INDUCIBLE TRANSCRIPTION FACTOR 11.5e-1748.75Show/hide
Query:  RKTDWLNSLLQSKFFGSCVHHQNNRKNEKNVFCIDCGIAICRHCLISHCVHRRLQICKYVYQYVVRVPDLQNHLDCCNIQ
        +K  WL++L   KFF  C +H+  +KNE+NV C+DC  ++C HC+ SH  HR LQ+ +YVY  VVR+ DLQ  +DC N+Q
Subjt:  RKTDWLNSLLQSKFFGSCVHHQNNRKNEKNVFCIDCGIAICRHCLISHCVHRRLQICKYVYQYVVRVPDLQNHLDCCNIQ

Arabidopsis top hitse value%identityAlignment
AT1G31040.1 PLATZ transcription factor family protein7.8e-1748.1Show/hide
Query:  KTDWLNSLLQSKFFGSCVHHQNNRKNEKNVFCIDCGIAICRHCLISHCVHRRLQICKYVYQYVVRVPDLQNHLDCCNIQ
        K  WL  L+   FF SC  H+  RK+EKNVFC+ C +++C HCL SH  H  LQ+ +YVY  VVR+ DL+  +DC  +Q
Subjt:  KTDWLNSLLQSKFFGSCVHHQNNRKNEKNVFCIDCGIAICRHCLISHCVHRRLQICKYVYQYVVRVPDLQNHLDCCNIQ

AT1G43000.1 PLATZ transcription factor family protein3.4e-1240.74Show/hide
Query:  WLNSLLQSKFFGSCVHHQNNRKNEKNVFCIDC-GIAICRHCLISHCVHRRLQICKYVYQYVVRVPDLQNHLDCCNIQVSMV
        WL  +L++ +F +C  H  + K+E N+FC+DC G A C  CL  H  HR +QI +  Y  VVRV ++Q H+D   IQ  ++
Subjt:  WLNSLLQSKFFGSCVHHQNNRKNEKNVFCIDC-GIAICRHCLISHCVHRRLQICKYVYQYVVRVPDLQNHLDCCNIQVSMV

AT2G01818.1 PLATZ transcription factor family protein2.3e-2447.32Show/hide
Query:  KKRKTD--WLNSLLQSKFFGSCVHHQNNRKNEKNVFCIDCGIAICRHC----LISHCVHRRLQICKYVYQYVVRVPDLQNHLDCCNIQVSMVPVELNNQS
        +KR+++  W+ +LL S+FFG C++H+  RKNEKNVFCIDC + ICRHC      SH +HRRLQICKYVYQ V+R+ ++QN+ DC  IQ      ++N + 
Subjt:  KKRKTD--WLNSLLQSKFFGSCVHHQNNRKNEKNVFCIDCGIAICRHC----LISHCVHRRLQICKYVYQYVVRVPDLQNHLDCCNIQVSMVPVELNNQS

Query:  CRYIDLESNLKD
          +++     KD
Subjt:  CRYIDLESNLKD

AT2G12646.1 PLATZ transcription factor family protein1.1e-1848.75Show/hide
Query:  RKTDWLNSLLQSKFFGSCVHHQNNRKNEKNVFCIDCGIAICRHCLISHCVHRRLQICKYVYQYVVRVPDLQNHLDCCNIQ
        +K  WL++L   KFF  C +H+  +KNE+NV C+DC  ++C HC+ SH  HR LQ+ +YVY  VVR+ DLQ  +DC N+Q
Subjt:  RKTDWLNSLLQSKFFGSCVHHQNNRKNEKNVFCIDCGIAICRHCLISHCVHRRLQICKYVYQYVVRVPDLQNHLDCCNIQ

AT3G60670.1 PLATZ transcription factor family protein4.9e-1953.95Show/hide
Query:  WLNSLLQSKFFGSCVHHQNNRKNEKNVFCIDCGIAICRHCLISHCVHRRLQICKYVYQYVVRVPDLQNHLDCCNIQ
        WL  LL+ KFF +C+ H++++KNEKN+ CIDC + IC HCL SH  HR LQI +YVY+ V+RV D    +DC  IQ
Subjt:  WLNSLLQSKFFGSCVHHQNNRKNEKNVFCIDCGIAICRHCLISHCVHRRLQICKYVYQYVVRVPDLQNHLDCCNIQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGGATGCAAGATTTATCTGAAGAAAAGGAAAACAGATTGGCTTAATTCCCTTTTGCAAAGCAAATTTTTTGGTTCTTGTGTTCATCATCAAAACAATAGGAAAAA
TGAAAAGAATGTGTTTTGTATAGACTGTGGTATTGCCATCTGCAGGCATTGCCTGATATCTCATTGCGTTCATCGGCGTCTACAGATCTGTAAGTACGTTTATCAGTACG
TCGTTCGTGTGCCCGACTTGCAAAACCACCTTGATTGTTGCAATATTCAGGTCTCTATGGTTCCAGTGGAACTTAACAATCAAAGCTGTAGATATATCGATTTGGAGTCG
AATCTTAAAGACATTCCATGGAAGGAAAACCATAATCTAGAAACCAATACAAGCGAAATGGAATCGTCGTCGATCTCGGTGGCTGAATCAACTGAAGAAATTAAAGCGTG
GCGAGTGAAGACCGTCTTGAATCCAAAGAAGCTTTTGCATAAAAGGAAGGGCATTCCCCATCGATCGCCTCTAAAGTAA
mRNA sequenceShow/hide mRNA sequence
CACTTTCCCTTTTTCTTTTTATTTTTCCCCTCTTCTTTTTATTTATTTATTTTTAATTATCATTCTTCTTCTTCTTATTATTGTTCAGTTTTCACTTTGCAGCCGCACAT
ACAGTCTCTATTGCCTATTCATGTTCTTCTCTCTCTGATTTCTCTTCTCCCCTTCTCTTTTTCCCTATATACTTGAAGAAATTTCCCACAATTTCAGCGTTTTTTTTTTT
TTATCGATTTTTCATCGACCCAGAACTTGGGGTTCCTTCAAATTACATTTGGATATGGCAGGATGCAAGATTTATCTGAAGAAAAGGAAAACAGATTGGCTTAATTCCCT
TTTGCAAAGCAAATTTTTTGGTTCTTGTGTTCATCATCAAAACAATAGGAAAAATGAAAAGAATGTGTTTTGTATAGACTGTGGTATTGCCATCTGCAGGCATTGCCTGA
TATCTCATTGCGTTCATCGGCGTCTACAGATCTGTAAGTACGTTTATCAGTACGTCGTTCGTGTGCCCGACTTGCAAAACCACCTTGATTGTTGCAATATTCAGGTCTCT
ATGGTTCCAGTGGAACTTAACAATCAAAGCTGTAGATATATCGATTTGGAGTCGAATCTTAAAGACATTCCATGGAAGGAAAACCATAATCTAGAAACCAATACAAGCGA
AATGGAATCGTCGTCGATCTCGGTGGCTGAATCAACTGAAGAAATTAAAGCGTGGCGAGTGAAGACCGTCTTGAATCCAAAGAAGCTTTTGCATAAAAGGAAGGGCATTC
CCCATCGATCGCCTCTAAAGTAATGCCTAAAAACTAATCATGAAGATCTTCGATACCCTTTTTTCTGCCAAACCCACATTTTTTTTTCATATATCAAAGTCCTATAAGCA
TATAAGTATAGATATATAATAACATATATTTCACCTCTTGGTTTTTGGCTCTATATTGGATTAGTTATGTTTTAGCTTCATTTATTTTTGGCAATTTTTTGGAGATTGTA
TAGAAAAGGATAAAGTTGCTTGTGGAAACAATAATCAAATAATCAACCTTTTTTATCTT
Protein sequenceShow/hide protein sequence
MAGCKIYLKKRKTDWLNSLLQSKFFGSCVHHQNNRKNEKNVFCIDCGIAICRHCLISHCVHRRLQICKYVYQYVVRVPDLQNHLDCCNIQVSMVPVELNNQSCRYIDLES
NLKDIPWKENHNLETNTSEMESSSISVAESTEEIKAWRVKTVLNPKKLLHKRKGIPHRSPLK