; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi09G007290 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi09G007290
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionProtein XRI1
Genome locationchr09:8399375..8401574
RNA-Seq ExpressionLsi09G007290
SyntenyLsi09G007290
Gene Ontology termsGO:0007140 - male meiotic nuclear division (biological process)
GO:0007143 - female meiotic nuclear division (biological process)
InterPro domainsIPR039933 - Protein XRI1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0067591.1 protein XRI1 [Cucumis melo var. makuwa]3.2e-9975.93Show/hide
Query:  GGAAVIDPSFSPAISTGYLEDALVEYSSKRRRLD---QHVLQFEFPQSYWSALESYDWNNQIDDINNNYYYYHNYDAIST-----------DEGISTSPK
        GGAAVIDP FSPAISTGYLEDAL+EY+SKRRRLD    H  QFEFPQS +     + WN+QIDD+NN+ YYY+NYDAIST           DEGIS+SPK
Subjt:  GGAAVIDPSFSPAISTGYLEDALVEYSSKRRRLD---QHVLQFEFPQSYWSALESYDWNNQIDDINNNYYYYHNYDAIST-----------DEGISTSPK

Query:  SRMS-EETSMEMCGEEGMKTQELETFSTPNYYYE---HHPNSSSSSSSKLHKVEAEFLADKESIFSMSHNLPISTGNGGNEIKKTKKRKVVYPFALVKPG
        SR+S EETSME      MKTQ++ET+STPNYYYE   HHPNSSSSSSSK HK E    AD++SIFSMS NLPISTG+G  E KK KKRKVVYPFALVKPG
Subjt:  SRMS-EETSMEMCGEEGMKTQELETFSTPNYYYE---HHPNSSSSSSSKLHKVEAEFLADKESIFSMSHNLPISTGNGGNEIKKTKKRKVVYPFALVKPG

Query:  GIEGDMTLNDINQKILMPPTRPVRHPVGDFACRPCVSADGPGLSGKAVVALTKIHTQGRRGTITIIRTKG
        G+EGD+TLNDINQKILMPPTRPVRHPVGDFACRPCVSADGPGLSGKAVVALTKIHTQGRRGTITIIRTKG
Subjt:  GIEGDMTLNDINQKILMPPTRPVRHPVGDFACRPCVSADGPGLSGKAVVALTKIHTQGRRGTITIIRTKG

XP_004151416.1 uncharacterized protein LOC101215634 [Cucumis sativus]3.7e-11178.2Show/hide
Query:  SSGSELQSLSLFNSSPLGFAIMDGGAAVIDPSFSPAISTGYLEDALVEYSSKRRRLD----QHVLQFEFPQSYWSALESYD-WNNQIDDINNNYYYYHNY
        SSGSEL SL   NSSPLGFAIM+G AAVIDP FSPAISTGYLEDALVEY+SKRRRLD     H   F+FPQ+      SYD WNNQIDDINN+YYYY+NY
Subjt:  SSGSELQSLSLFNSSPLGFAIMDGGAAVIDPSFSPAISTGYLEDALVEYSSKRRRLD----QHVLQFEFPQSYWSALESYD-WNNQIDDINNNYYYYHNY

Query:  DAISTDEGISTSPKSRMS-EETSMEMCGEEGMKTQELETFSTPNYYYE--------HHPNSSSSSSSKLHKVEAEFLADKESIFSMSHNLPISTGNGGNE
         AISTDEGIS+SPKSR+S EETSM    E+ MKTQ++ET+STPNYYYE        HHPNSSSSSSSK HK E    AD++SIFSMS NLPISTG+G  E
Subjt:  DAISTDEGISTSPKSRMS-EETSMEMCGEEGMKTQELETFSTPNYYYE--------HHPNSSSSSSSKLHKVEAEFLADKESIFSMSHNLPISTGNGGNE

Query:  IKKTKKRKVVYPFALVKPGGIEGDMTLNDINQKILMPPTRPVRHPVGDFACRPCVSADGPGLSGKAVVALTKIHTQGRRGTITIIRTKG
         KK KKRKVVYPFALVKPGG+EGDMTLNDINQKILMPPTRPVRHPVGDFACRPCVSADGPGLSGKAVVALTKIHTQGRRGTITIIRTKG
Subjt:  IKKTKKRKVVYPFALVKPGGIEGDMTLNDINQKILMPPTRPVRHPVGDFACRPCVSADGPGLSGKAVVALTKIHTQGRRGTITIIRTKG

XP_008466833.2 PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103504140 [Cucumis melo]2.5e-9175.78Show/hide
Query:  GGAAVIDPSFSPAISTGYLEDALVEYSSKRRRLDQHVLQFEFPQSYWSALESYDWNNQIDDINNNYYYYHNYDAISTDEGISTSPKSRMS-EETSMEMCG
        GGAAVIDP FSPAISTGYLEDAL+EY+SKRRRLD     F F  +   AL        +  I    YYY+NYDAISTDEGIS+SPKSR+S EETSME   
Subjt:  GGAAVIDPSFSPAISTGYLEDALVEYSSKRRRLDQHVLQFEFPQSYWSALESYDWNNQIDDINNNYYYYHNYDAISTDEGISTSPKSRMS-EETSMEMCG

Query:  EEGMKTQELETFSTPNYYYE---HHPNSSSSSSSKLHKVEAEFLADKESIFSMSHNLPISTGNGGNEIKKTKKRKVVYPFALVKPGGIEGDMTLNDINQK
           MKTQ++ET+STPNYYYE   HHPNSSSSSSSK HK E    AD++SIFSMS NLPISTG+G  E KK KKRKVVYPFALVKPGG+EGD+TLNDINQK
Subjt:  EEGMKTQELETFSTPNYYYE---HHPNSSSSSSSKLHKVEAEFLADKESIFSMSHNLPISTGNGGNEIKKTKKRKVVYPFALVKPGGIEGDMTLNDINQK

Query:  ILMPPTRPVRHPVGDFACRPCVSADGPGLSGKAVVALTKIHTQGRRGTITIIRTKG
        ILMPPTRPVRHPVGDFACRPCVSADGPGLSGKAVVALTKIHTQGRRGTITIIRTKG
Subjt:  ILMPPTRPVRHPVGDFACRPCVSADGPGLSGKAVVALTKIHTQGRRGTITIIRTKG

XP_022146436.1 uncharacterized protein LOC111015652 [Momordica charantia]6.7e-8964.98Show/hide
Query:  SELQSLSLFNSSPLGFAIMDGG----AAVIDPSFSPAISTGYLEDALVEYSSKRRRL--------DQHVLQFEFPQSYWS-----------ALESYDWNN
        S+L SL    SSPL FA+MD      A  +DP FSP +STGYLEDALVE++SKRRRL        +  V QF+FPQSYWS           A +++DW N
Subjt:  SELQSLSLFNSSPLGFAIMDGG----AAVIDPSFSPAISTGYLEDALVEYSSKRRRL--------DQHVLQFEFPQSYWS-----------ALESYDWNN

Query:  QIDDINNNYYYYHNYDAISTDEGISTSPKSRMSEETSMEMCGEEGMKTQELETFSTPNY--YYEHHPNSSSSSSSKLHKVEAEFLADKESIFSMSHNLPI
        QI D N       NYDA+S DE ISTSPKSR+SEET+        MKT E+E FSTPNY  Y   HPNSSSSSS   H+  AEFLADK++I S+S  LP+
Subjt:  QIDDINNNYYYYHNYDAISTDEGISTSPKSRMSEETSMEMCGEEGMKTQELETFSTPNY--YYEHHPNSSSSSSSKLHKVEAEFLADKESIFSMSHNLPI

Query:  STGNGGNEIKKTKKRKVVYPFALVKPGGIEGDMTLNDINQKILMPPTRPVRHPVGDFACRPCVSADGPGLSGKAVVALTKIHTQGRRGTITIIRTKG
        S+G GG+E K  KKRKVVYPFALVKPGG+EGD+TLNDINQKILMPPTRPVRHPVGDFACRPCVSADGPGLSGKAVVALT+IHTQGRRG+ITIIRTKG
Subjt:  STGNGGNEIKKTKKRKVVYPFALVKPGGIEGDMTLNDINQKILMPPTRPVRHPVGDFACRPCVSADGPGLSGKAVVALTKIHTQGRRGTITIIRTKG

XP_038874964.1 uncharacterized protein LOC120067481 [Benincasa hispida]4.5e-11782.21Show/hide
Query:  SSGSELQSLSLFNSSPLGFAIMDGGAAVIDPSFSPAISTGYLEDALVEYSSKRRRLDQHVLQFEFPQSYWSALESYDWNNQIDDI--NNNYYYYHNYDAI
        S G ELQSLSLFNSSPLGFA+MDG AAVI+PSFSPAISTGYLEDALVEY+SKRRRLD H+ QFEFPQS WSALE YDWNNQIDD+  NNNYYYYHNYDA+
Subjt:  SSGSELQSLSLFNSSPLGFAIMDGGAAVIDPSFSPAISTGYLEDALVEYSSKRRRLDQHVLQFEFPQSYWSALESYDWNNQIDDI--NNNYYYYHNYDAI

Query:  STDEGISTSPKSRMSEETSMEMCGEEGMKTQELETFSTPNYYYEHH-PNSSSSS-SSKLHKV--EAEFLADKESIFSMSHNLPISTGNGGNEIKKTKKRK
        ST+EGIS+S KSRMSEETSM+M     MKTQE++T+STPNYYYEH+ PNSSSSS SSKLHKV  EAEFLADKESIFS+S NLPISTG             
Subjt:  STDEGISTSPKSRMSEETSMEMCGEEGMKTQELETFSTPNYYYEHH-PNSSSSS-SSKLHKV--EAEFLADKESIFSMSHNLPISTGNGGNEIKKTKKRK

Query:  VVYPFALVKPGGIEGDMTLNDINQKILMPPTRPVRHPVGDFACRPCVSADGPGLSGKAVVALTKIHTQGRRGTITIIRTKG
          +PFALVKPGGIEGDMTLNDINQKILMPPTRPVRHPVGDFACRPCVSADGPGLSGKAVVALTKIHTQGRRGTITIIRTKG
Subjt:  VVYPFALVKPGGIEGDMTLNDINQKILMPPTRPVRHPVGDFACRPCVSADGPGLSGKAVVALTKIHTQGRRGTITIIRTKG

TrEMBL top hitse value%identityAlignment
A0A0A0KMV0 Uncharacterized protein1.8e-11178.2Show/hide
Query:  SSGSELQSLSLFNSSPLGFAIMDGGAAVIDPSFSPAISTGYLEDALVEYSSKRRRLD----QHVLQFEFPQSYWSALESYD-WNNQIDDINNNYYYYHNY
        SSGSEL SL   NSSPLGFAIM+G AAVIDP FSPAISTGYLEDALVEY+SKRRRLD     H   F+FPQ+      SYD WNNQIDDINN+YYYY+NY
Subjt:  SSGSELQSLSLFNSSPLGFAIMDGGAAVIDPSFSPAISTGYLEDALVEYSSKRRRLD----QHVLQFEFPQSYWSALESYD-WNNQIDDINNNYYYYHNY

Query:  DAISTDEGISTSPKSRMS-EETSMEMCGEEGMKTQELETFSTPNYYYE--------HHPNSSSSSSSKLHKVEAEFLADKESIFSMSHNLPISTGNGGNE
         AISTDEGIS+SPKSR+S EETSM    E+ MKTQ++ET+STPNYYYE        HHPNSSSSSSSK HK E    AD++SIFSMS NLPISTG+G  E
Subjt:  DAISTDEGISTSPKSRMS-EETSMEMCGEEGMKTQELETFSTPNYYYE--------HHPNSSSSSSSKLHKVEAEFLADKESIFSMSHNLPISTGNGGNE

Query:  IKKTKKRKVVYPFALVKPGGIEGDMTLNDINQKILMPPTRPVRHPVGDFACRPCVSADGPGLSGKAVVALTKIHTQGRRGTITIIRTKG
         KK KKRKVVYPFALVKPGG+EGDMTLNDINQKILMPPTRPVRHPVGDFACRPCVSADGPGLSGKAVVALTKIHTQGRRGTITIIRTKG
Subjt:  IKKTKKRKVVYPFALVKPGGIEGDMTLNDINQKILMPPTRPVRHPVGDFACRPCVSADGPGLSGKAVVALTKIHTQGRRGTITIIRTKG

A0A1S3CSB7 LOW QUALITY PROTEIN: uncharacterized protein LOC1035041401.2e-9175.78Show/hide
Query:  GGAAVIDPSFSPAISTGYLEDALVEYSSKRRRLDQHVLQFEFPQSYWSALESYDWNNQIDDINNNYYYYHNYDAISTDEGISTSPKSRMS-EETSMEMCG
        GGAAVIDP FSPAISTGYLEDAL+EY+SKRRRLD     F F  +   AL        +  I    YYY+NYDAISTDEGIS+SPKSR+S EETSME   
Subjt:  GGAAVIDPSFSPAISTGYLEDALVEYSSKRRRLDQHVLQFEFPQSYWSALESYDWNNQIDDINNNYYYYHNYDAISTDEGISTSPKSRMS-EETSMEMCG

Query:  EEGMKTQELETFSTPNYYYE---HHPNSSSSSSSKLHKVEAEFLADKESIFSMSHNLPISTGNGGNEIKKTKKRKVVYPFALVKPGGIEGDMTLNDINQK
           MKTQ++ET+STPNYYYE   HHPNSSSSSSSK HK E    AD++SIFSMS NLPISTG+G  E KK KKRKVVYPFALVKPGG+EGD+TLNDINQK
Subjt:  EEGMKTQELETFSTPNYYYE---HHPNSSSSSSSKLHKVEAEFLADKESIFSMSHNLPISTGNGGNEIKKTKKRKVVYPFALVKPGGIEGDMTLNDINQK

Query:  ILMPPTRPVRHPVGDFACRPCVSADGPGLSGKAVVALTKIHTQGRRGTITIIRTKG
        ILMPPTRPVRHPVGDFACRPCVSADGPGLSGKAVVALTKIHTQGRRGTITIIRTKG
Subjt:  ILMPPTRPVRHPVGDFACRPCVSADGPGLSGKAVVALTKIHTQGRRGTITIIRTKG

A0A5A7VPU6 Protein XRI11.6e-9975.93Show/hide
Query:  GGAAVIDPSFSPAISTGYLEDALVEYSSKRRRLD---QHVLQFEFPQSYWSALESYDWNNQIDDINNNYYYYHNYDAIST-----------DEGISTSPK
        GGAAVIDP FSPAISTGYLEDAL+EY+SKRRRLD    H  QFEFPQS +     + WN+QIDD+NN+ YYY+NYDAIST           DEGIS+SPK
Subjt:  GGAAVIDPSFSPAISTGYLEDALVEYSSKRRRLD---QHVLQFEFPQSYWSALESYDWNNQIDDINNNYYYYHNYDAIST-----------DEGISTSPK

Query:  SRMS-EETSMEMCGEEGMKTQELETFSTPNYYYE---HHPNSSSSSSSKLHKVEAEFLADKESIFSMSHNLPISTGNGGNEIKKTKKRKVVYPFALVKPG
        SR+S EETSME      MKTQ++ET+STPNYYYE   HHPNSSSSSSSK HK E    AD++SIFSMS NLPISTG+G  E KK KKRKVVYPFALVKPG
Subjt:  SRMS-EETSMEMCGEEGMKTQELETFSTPNYYYE---HHPNSSSSSSSKLHKVEAEFLADKESIFSMSHNLPISTGNGGNEIKKTKKRKVVYPFALVKPG

Query:  GIEGDMTLNDINQKILMPPTRPVRHPVGDFACRPCVSADGPGLSGKAVVALTKIHTQGRRGTITIIRTKG
        G+EGD+TLNDINQKILMPPTRPVRHPVGDFACRPCVSADGPGLSGKAVVALTKIHTQGRRGTITIIRTKG
Subjt:  GIEGDMTLNDINQKILMPPTRPVRHPVGDFACRPCVSADGPGLSGKAVVALTKIHTQGRRGTITIIRTKG

A0A6J1CZC7 uncharacterized protein LOC1110156523.2e-8964.98Show/hide
Query:  SELQSLSLFNSSPLGFAIMDGG----AAVIDPSFSPAISTGYLEDALVEYSSKRRRL--------DQHVLQFEFPQSYWS-----------ALESYDWNN
        S+L SL    SSPL FA+MD      A  +DP FSP +STGYLEDALVE++SKRRRL        +  V QF+FPQSYWS           A +++DW N
Subjt:  SELQSLSLFNSSPLGFAIMDGG----AAVIDPSFSPAISTGYLEDALVEYSSKRRRL--------DQHVLQFEFPQSYWS-----------ALESYDWNN

Query:  QIDDINNNYYYYHNYDAISTDEGISTSPKSRMSEETSMEMCGEEGMKTQELETFSTPNY--YYEHHPNSSSSSSSKLHKVEAEFLADKESIFSMSHNLPI
        QI D N       NYDA+S DE ISTSPKSR+SEET+        MKT E+E FSTPNY  Y   HPNSSSSSS   H+  AEFLADK++I S+S  LP+
Subjt:  QIDDINNNYYYYHNYDAISTDEGISTSPKSRMSEETSMEMCGEEGMKTQELETFSTPNY--YYEHHPNSSSSSSSKLHKVEAEFLADKESIFSMSHNLPI

Query:  STGNGGNEIKKTKKRKVVYPFALVKPGGIEGDMTLNDINQKILMPPTRPVRHPVGDFACRPCVSADGPGLSGKAVVALTKIHTQGRRGTITIIRTKG
        S+G GG+E K  KKRKVVYPFALVKPGG+EGD+TLNDINQKILMPPTRPVRHPVGDFACRPCVSADGPGLSGKAVVALT+IHTQGRRG+ITIIRTKG
Subjt:  STGNGGNEIKKTKKRKVVYPFALVKPGGIEGDMTLNDINQKILMPPTRPVRHPVGDFACRPCVSADGPGLSGKAVVALTKIHTQGRRGTITIIRTKG

A0A6J1FFR7 protein XRI1-like1.5e-7357.69Show/hide
Query:  MSSGSELQSLSLFNSSPLGFAIMDGGAAVIDPSFSPAISTGYLEDALVEYSSKRRRLDQHVLQFEFPQSYWS--------ALESYDW-NNQIDDINNNYY
        MS GSEL SLSLF+SSPLGFA+MD   A +D SF PAISTGYLEDALV+Y+ KRRRL  H+++FEFPQ YWS        ALES+DW NNQIDD+NN   
Subjt:  MSSGSELQSLSLFNSSPLGFAIMDGGAAVIDPSFSPAISTGYLEDALVEYSSKRRRLDQHVLQFEFPQSYWS--------ALESYDW-NNQIDDINNNYY

Query:  YYHNYDAISTDEGISTSPKSRMSEETSMEMCGEEGMKT-QELETFSTPNYYYEHHPNSSSSSSSKLHKVEAEFLADKESIFSMSHNLPISTGNGGNEIKK
                 T+EGISTSPK+R+             +KT  E+E FSTPN                                        S+   G+E KK
Subjt:  YYHNYDAISTDEGISTSPKSRMSEETSMEMCGEEGMKT-QELETFSTPNYYYEHHPNSSSSSSSKLHKVEAEFLADKESIFSMSHNLPISTGNGGNEIKK

Query:  TKKRKVVYPFALVKPGGIEGDMTLNDINQKILMPPTRPVRHPVGDFACRPCVSADGPGLSGKAVVALTKIHTQGRRGTITIIRTKG
         KKRKVVYPFALVKPGG+EGD+TLNDIN+K+LMPPTR VRHPVGDFACRP V+A+G GLSGKAVVALTKIHTQGRRG+ITIIRTKG
Subjt:  TKKRKVVYPFALVKPGGIEGDMTLNDINQKILMPPTRPVRHPVGDFACRPCVSADGPGLSGKAVVALTKIHTQGRRGTITIIRTKG

SwissProt top hitse value%identityAlignment
Q6NLW5 Protein XRI14.8e-1349.38Show/hide
Query:  VVYPFALVKPGGIEGDMTLNDINQKILMPPTRPVRHPVGDFACRPCVSADGPGLSGKAVVALTKIHTQGRRGTITIIRTKG
        ++YPFA +KP G+ G MTL DINQKI  PP +P  H        P V       SGK VV  TKI T+G +G+ITI+RT+G
Subjt:  VVYPFALVKPGGIEGDMTLNDINQKILMPPTRPVRHPVGDFACRPCVSADGPGLSGKAVVALTKIHTQGRRGTITIIRTKG

Arabidopsis top hitse value%identityAlignment
AT1G14630.1 unknown protein2.9e-3742.74Show/hide
Query:  ISTGYLEDALVEYS--SKRRRLDQHVLQFEFPQSYWSALESYDWNNQIDDINNNYYYYHNYDAISTDEGISTSPKSRMSEETSMEMCGEEGMKTQELETF
        +STGYLEDAL+E+S  SKRRRL                     +N   D  +N+  +  N+  +S +   ++S  +  S  +S+ +C EE        +F
Subjt:  ISTGYLEDALVEYS--SKRRRLDQHVLQFEFPQSYWSALESYDWNNQIDDINNNYYYYHNYDAISTDEGISTSPKSRMSEETSMEMCGEEGMKTQELETF

Query:  STPNYYYEHHPNSSSSSSSKLHKVEAEFLADKESIFSMSHNLPISTGNGGNEIKKTKKRKVVYPFALVKPGGIEGDMTLNDINQKILMPPTRPVRHPVGD
                      SSS+SK +  +                               +K++VVYPF +VKPGG E D+TLNDIN++ILMP  RPVRHPVGD
Subjt:  STPNYYYEHHPNSSSSSSSKLHKVEAEFLADKESIFSMSHNLPISTGNGGNEIKKTKKRKVVYPFALVKPGGIEGDMTLNDINQKILMPPTRPVRHPVGD

Query:  FACRPCVSADGPGLSGKAVVALTKIHTQGRRGTITIIRTKG
        FACRPCVSADGPGLSGKAVVA TKI T G RGTITIIRTKG
Subjt:  FACRPCVSADGPGLSGKAVVALTKIHTQGRRGTITIIRTKG

AT2G01990.1 unknown protein5.9e-3546.28Show/hide
Query:  ISTGYLEDALVEYS--SKRRRLDQHVLQFEFPQSYWSALESYDWNNQIDDINNNYYYYHNYDAISTDEGISTSPKSRMSEETS-MEMCGEEGMKTQELET
        +STGYLEDAL+E    SKRRR     L FE P        S  +N+  DD  N++  + +Y  +++      +P     E  S +  C E          
Subjt:  ISTGYLEDALVEYS--SKRRRLDQHVLQFEFPQSYWSALESYDWNNQIDDINNNYYYYHNYDAISTDEGISTSPKSRMSEETS-MEMCGEEGMKTQELET

Query:  FSTPNYYYEHHPNSSSSSSSKLHKVEAEFLADKESIFSMSHNLPISTGNGGNEIKKTKKRKVVYPFALVKPGGIEGDMTLNDINQKILMPPTRPVRHPVG
          T +  YE  P++S S              DK  +   S   P S+ N GN+ K+    K+VYPF LVKPGG E D+TLNDIN++ILM P+RP+RHPVG
Subjt:  FSTPNYYYEHHPNSSSSSSSKLHKVEAEFLADKESIFSMSHNLPISTGNGGNEIKKTKKRKVVYPFALVKPGGIEGDMTLNDINQKILMPPTRPVRHPVG

Query:  DFACRPCVSADGPGLSGKAVVALTKIHTQGRRGTITIIRTKG
        DFA RPCVS  GPGLSGKAVVALTKI TQG RGTITIIRTKG
Subjt:  DFACRPCVSADGPGLSGKAVVALTKIHTQGRRGTITIIRTKG

AT5G48720.1 x-ray induced transcript 13.4e-1449.38Show/hide
Query:  VVYPFALVKPGGIEGDMTLNDINQKILMPPTRPVRHPVGDFACRPCVSADGPGLSGKAVVALTKIHTQGRRGTITIIRTKG
        ++YPFA +KP G+ G MTL DINQKI  PP +P  H        P V       SGK VV  TKI T+G +G+ITI+RT+G
Subjt:  VVYPFALVKPGGIEGDMTLNDINQKILMPPTRPVRHPVGDFACRPCVSADGPGLSGKAVVALTKIHTQGRRGTITIIRTKG

AT5G48720.2 x-ray induced transcript 13.4e-1449.38Show/hide
Query:  VVYPFALVKPGGIEGDMTLNDINQKILMPPTRPVRHPVGDFACRPCVSADGPGLSGKAVVALTKIHTQGRRGTITIIRTKG
        ++YPFA +KP G+ G MTL DINQKI  PP +P  H        P V       SGK VV  TKI T+G +G+ITI+RT+G
Subjt:  VVYPFALVKPGGIEGDMTLNDINQKILMPPTRPVRHPVGDFACRPCVSADGPGLSGKAVVALTKIHTQGRRGTITIIRTKG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTAGTGGTAGTGAACTTCAGTCTCTATCTTTGTTCAATTCCTCACCGTTGGGTTTTGCAATTATGGACGGCGGCGCCGCCGTCATAGACCCATCTTTCTCGCCGGC
GATTTCCACCGGTTATTTGGAAGATGCGTTGGTTGAGTATAGTTCAAAACGACGCCGCTTGGATCAACATGTTCTTCAATTTGAATTCCCACAGAGCTATTGGAGTGCCC
TCGAGAGTTACGATTGGAACAACCAAATTGACGATATTAACAATAATTATTATTATTATCATAATTATGACGCGATTTCTACAGATGAGGGAATAAGCACTTCGCCAAAA
AGCAGAATGAGTGAGGAAACGAGTATGGAAATGTGTGGGGAAGAGGGGATGAAAACGCAAGAATTGGAGACGTTTTCGACTCCAAATTACTACTATGAACATCATCCCAA
TTCTTCTTCTTCATCTTCTTCGAAATTACACAAAGTTGAGGCCGAGTTTTTGGCTGATAAGGAATCCATTTTCTCCATGTCCCACAACCTGCCTATTTCAACAGGAAACG
GTGGAAATGAAATAAAGAAGACAAAGAAGAGGAAGGTGGTGTATCCATTTGCATTAGTGAAGCCAGGAGGTATAGAAGGTGATATGACCTTAAACGACATAAACCAAAAG
ATTTTAATGCCTCCAACCCGGCCGGTCCGACACCCAGTCGGAGATTTCGCGTGTAGACCGTGCGTGTCGGCTGACGGACCGGGGCTGTCGGGCAAAGCCGTGGTGGCGTT
GACCAAAATTCATACTCAAGGAAGGAGAGGCACCATCACCATTATTAGAACCAAGGGTTAA
mRNA sequenceShow/hide mRNA sequence
TTTCAGTTTTAAAAATTTTAGTAATTACAAAATGAGTAGTGGTAGTGAACTTCAGTCTCTATCTTTGTTCAATTCCTCACCGTTGGGTTTTGCAATTATGGACGGCGGCG
CCGCCGTCATAGACCCATCTTTCTCGCCGGCGATTTCCACCGGTTATTTGGAAGATGCGTTGGTTGAGTATAGTTCAAAACGACGCCGCTTGGATCAACATGTTCTTCAA
TTTGAATTCCCACAGAGCTATTGGAGTGCCCTCGAGAGTTACGATTGGAACAACCAAATTGACGATATTAACAATAATTATTATTATTATCATAATTATGACGCGATTTC
TACAGATGAGGGAATAAGCACTTCGCCAAAAAGCAGAATGAGTGAGGAAACGAGTATGGAAATGTGTGGGGAAGAGGGGATGAAAACGCAAGAATTGGAGACGTTTTCGA
CTCCAAATTACTACTATGAACATCATCCCAATTCTTCTTCTTCATCTTCTTCGAAATTACACAAAGTTGAGGCCGAGTTTTTGGCTGATAAGGAATCCATTTTCTCCATG
TCCCACAACCTGCCTATTTCAACAGGAAACGGTGGAAATGAAATAAAGAAGACAAAGAAGAGGAAGGTGGTGTATCCATTTGCATTAGTGAAGCCAGGAGGTATAGAAGG
TGATATGACCTTAAACGACATAAACCAAAAGATTTTAATGCCTCCAACCCGGCCGGTCCGACACCCAGTCGGAGATTTCGCGTGTAGACCGTGCGTGTCGGCTGACGGAC
CGGGGCTGTCGGGCAAAGCCGTGGTGGCGTTGACCAAAATTCATACTCAAGGAAGGAGAGGCACCATCACCATTATTAGAACCAAGGGTTAATAATAGAGACCAAAATGT
TAACCCCAAATATTTATTACTACTTCAAAAGTCTTTTAAGTTGTTCCAACTTTTATCAATTGGCTTTGCCTCTTTGAATTGTACAGAGGGGAGAGAGAAAGAAGGAGAGA
GAAGAAAATGTATATGTAATATAATGATTGGGAGAAGGGAGAGAGAGAGGTTAATGAATTTGTACTTGTATCATAGTTTTCAATTAAGACAGCCCTGCAGTCGTAATTGA
ATTGTTTAAATCAATCTTTTCTATA
Protein sequenceShow/hide protein sequence
MSSGSELQSLSLFNSSPLGFAIMDGGAAVIDPSFSPAISTGYLEDALVEYSSKRRRLDQHVLQFEFPQSYWSALESYDWNNQIDDINNNYYYYHNYDAISTDEGISTSPK
SRMSEETSMEMCGEEGMKTQELETFSTPNYYYEHHPNSSSSSSSKLHKVEAEFLADKESIFSMSHNLPISTGNGGNEIKKTKKRKVVYPFALVKPGGIEGDMTLNDINQK
ILMPPTRPVRHPVGDFACRPCVSADGPGLSGKAVVALTKIHTQGRRGTITIIRTKG