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Lsi09G007570 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi09G007570
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr09:8670469..8678442
RNA-Seq ExpressionLsi09G007570
SyntenyLsi09G007570
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF3457574.1 hypothetical protein FNV43_RR02232 [Rhamnella rubrinervis]3.0e-0746.15Show/hide
Query:  TGRDVIQGDASTGKSLLNSIGNAISISVSGNGNRAAIVDINEGGTNILGDGVRIAALRNLTVLDVPPYRSLSPDVLGL
        TG+DV++ +A     LLN  G+AI I+V  NG+ A IVD+N+GG+++L DGV       LT+  VPP++ L P+VL L
Subjt:  TGRDVIQGDASTGKSLLNSIGNAISISVSGNGNRAAIVDINEGGTNILGDGVRIAALRNLTVLDVPPYRSLSPDVLGL
TrEMBL top hitse value%identityAlignment
A0A540L8U3 Uncharacterized protein9.8e-0441.27Show/hide
Query:  LLNSIGNAISISVSGNGNRAAIVDINEGGTNILGDGVRIAALRNLTVLDVPPYRSLSPDVLGL
        +LN I + + ++V G+G+   I+ ++EG T++LGDG+ I   R+L VL VPP+R     VL L
Subjt:  LLNSIGNAISISVSGNGNRAAIVDINEGGTNILGDGVRIAALRNLTVLDVPPYRSLSPDVLGL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGAACAGTAATCAGCAACATTTCAATGGAAACAGGGGTGGTACTAAAGAACACATTAGTCAAAGAAGATATCGTAATAGGACCACTTGCCAGTCAAAACAAAAGAG
CATCGTGTTTCCTTCCAGCGCCATAGATGACAAACTTATAGCATCTCAAAACAGACATGAAATGTACAACTCGCTGAGAAGACGAGAAAAACACGTGAACAAAGGTGTTC
AATGCAAGAAGAATAACTCCAATAAGGCCTTGAACAAGATGAATGAGGTGTACACTCTACTACATCACGAGCATGTCTTTTATTCAATGCATCATGATGGAATGATTGAC
CACCATGCTGACTACGGCCTTTGTCTGCTTATTAATATTGGGTGCAGAGAGATCAGGTTGACCAGGGACTGGAAAAGAACTATGATTAAGGGAGTTAGGAGGAAAAACAT
TATCTGGTCGAAAAGGAGGACGGAGCTGCATGTTGTTTTGCCTCATGTGGGGAGGTTGCTTGTCCTGTCTGCTGATTATGATCAAATCCAGAGCTCTGTGATATTTGAGG
GTCAGAAGACATTGGGGGTCCTCCAGCTACAAGACTCATCCAAAGCCAAACACTCTTTGCTGCTGCAACTAGTGGTGCAGAAGCCTTTTGTGGCTGTGCAAGAAGAATAT
TATATCTTCTCATTCTTAATTGATGAAGTGCGAGCAGGGTTATCAACTGCCCAAAACAACATATCGACTAGAATCTTCTTGTCACTTGCATCTTTAACACCTGTTAGAAG
AAAGCTTAACAAATTAGAGTCCAACAAGTCCTTCAACTTTGCGAATAAAAAACAAAACAGGAACCCTAGGGTTTGCATAACCTGTACAACGAGAAACATCATAAGGGGAA
AGAGAATTACCGGCAGGGACGTGATTCAAGGCGATGCCAGTACTGGAAAGAGCTTGCTGAATAGTATTGGGAATGCGATTAGTATCTCCGTAAGCGGAAATGGAAACAGG
GCCGCAATAGTTGATATTAACGAGGGCGGAACTAATATTCTGGGCGATGGCGTGAGGATCGCAGCCCTTAGGAACCTGACAGTTCTCGATGTCCCACCATACAGAAGTCT
TAGCCCTGATGTACTGGGGCTCGGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTGAACAGTAATCAGCAACATTTCAATGGAAACAGGGGTGGTACTAAAGAACACATTAGTCAAAGAAGATATCGTAATAGGACCACTTGCCAGTCAAAACAAAAGAG
CATCGTGTTTCCTTCCAGCGCCATAGATGACAAACTTATAGCATCTCAAAACAGACATGAAATGTACAACTCGCTGAGAAGACGAGAAAAACACGTGAACAAAGGTGTTC
AATGCAAGAAGAATAACTCCAATAAGGCCTTGAACAAGATGAATGAGGTGTACACTCTACTACATCACGAGCATGTCTTTTATTCAATGCATCATGATGGAATGATTGAC
CACCATGCTGACTACGGCCTTTGTCTGCTTATTAATATTGGGTGCAGAGAGATCAGGTTGACCAGGGACTGGAAAAGAACTATGATTAAGGGAGTTAGGAGGAAAAACAT
TATCTGGTCGAAAAGGAGGACGGAGCTGCATGTTGTTTTGCCTCATGTGGGGAGGTTGCTTGTCCTGTCTGCTGATTATGATCAAATCCAGAGCTCTGTGATATTTGAGG
GTCAGAAGACATTGGGGGTCCTCCAGCTACAAGACTCATCCAAAGCCAAACACTCTTTGCTGCTGCAACTAGTGGTGCAGAAGCCTTTTGTGGCTGTGCAAGAAGAATAT
TATATCTTCTCATTCTTAATTGATGAAGTGCGAGCAGGGTTATCAACTGCCCAAAACAACATATCGACTAGAATCTTCTTGTCACTTGCATCTTTAACACCTGTTAGAAG
AAAGCTTAACAAATTAGAGTCCAACAAGTCCTTCAACTTTGCGAATAAAAAACAAAACAGGAACCCTAGGGTTTGCATAACCTGTACAACGAGAAACATCATAAGGGGAA
AGAGAATTACCGGCAGGGACGTGATTCAAGGCGATGCCAGTACTGGAAAGAGCTTGCTGAATAGTATTGGGAATGCGATTAGTATCTCCGTAAGCGGAAATGGAAACAGG
GCCGCAATAGTTGATATTAACGAGGGCGGAACTAATATTCTGGGCGATGGCGTGAGGATCGCAGCCCTTAGGAACCTGACAGTTCTCGATGTCCCACCATACAGAAGTCT
TAGCCCTGATGTACTGGGGCTCGGCTGA
Protein sequenceShow/hide protein sequence
MVNSNQQHFNGNRGGTKEHISQRRYRNRTTCQSKQKSIVFPSSAIDDKLIASQNRHEMYNSLRRREKHVNKGVQCKKNNSNKALNKMNEVYTLLHHEHVFYSMHHDGMID
HHADYGLCLLINIGCREIRLTRDWKRTMIKGVRRKNIIWSKRRTELHVVLPHVGRLLVLSADYDQIQSSVIFEGQKTLGVLQLQDSSKAKHSLLLQLVVQKPFVAVQEEY
YIFSFLIDEVRAGLSTAQNNISTRIFLSLASLTPVRRKLNKLESNKSFNFANKKQNRNPRVCITCTTRNIIRGKRITGRDVIQGDASTGKSLLNSIGNAISISVSGNGNR
AAIVDINEGGTNILGDGVRIAALRNLTVLDVPPYRSLSPDVLGLG