CuGenDBv2

Gene ID	Lsi09G007610
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	FAM192A_Fyv6_N domain-containing protein
Genome location	chr09:8710876..8715975
RNA-Seq Expression	Lsi09G007610
Synteny	Lsi09G007610
Gene Ontology terms	GO:0005634 - nucleus (cellular component)
InterPro domains	IPR019331 - FAM192A/Fyv6, N-terminal IPR039845 - PSME3-interacting protein

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

TYJ98134.1 protein FAM192A [Cucumis melo var. makuwa]

1.5e-96

94.84

Show/hide

Query:  MEDESARAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRDRPLFEILKENKDKRDAEFNERFKHRPPKALDEDETEFLDKLETSKREYERQMADADEQELR
        MEDES+RAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRDRPLFEILK+NKDKRDAEFNERFKHRPPKALDEDETEFLDKLETSKREYERQMADA+EQELR
Subjt:  MEDESARAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRDRPLFEILKENKDKRDAEFNERFKHRPPKALDEDETEFLDKLETSKREYERQMADADEQELR

Query:  SFQAAVAAQSILLNEVREITPPAPAAQEKASVRRETPVTRPPSMIIRVKPQAKKARIEPRSPEKAGSTTEIPDAKAKEPSKSAKTLDTNSDRPLE-AAIT
        SFQAAVAAQSILLNEVREITPPAPAAQEKASVRRETPV+RPPSMIIRVKPQAKKARIEPRSP+ AGS TEIP AKA+EPSKS KTLDTNSDRPLE AAIT
Subjt:  SFQAAVAAQSILLNEVREITPPAPAAQEKASVRRETPVTRPPSMIIRVKPQAKKARIEPRSPEKAGSTTEIPDAKAKEPSKSAKTLDTNSDRPLE-AAIT

Query:  GLVSYSDESEDED
        GLVSYSDESEDED
Subjt:  GLVSYSDESEDED

XP_004149477.1 PSME3-interacting protein [Cucumis sativus]

7.0e-94

93.43

Show/hide

Query:  MEDESARAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRDRPLFEILKENKDKRDAEFNERFKHRPPKALDEDETEFLDKLETSKREYERQMADADEQELR
        MEDES+RAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRDRPLFEILKENKDKRDAEFNERFKHRPPKALDEDETEFLDKLETSKREYERQMA+A+EQELR
Subjt:  MEDESARAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRDRPLFEILKENKDKRDAEFNERFKHRPPKALDEDETEFLDKLETSKREYERQMADADEQELR

Query:  SFQAAVAAQSILLNEVREITPPAPAAQEKASVRRETPVTRPPSMIIRVKPQAKKARIEPRSPEKAGSTTEIPDAKAKEPSKSAKTLDTNSDRPLEA-AIT
        SFQAAVAAQSILL+EVREITPPAPAAQEKASVRRETPV+RPPSMIIRVKPQAKKARIEPRSP+ AGSTTEI  AKA+E S S KTLDTNSDRPLEA AIT
Subjt:  SFQAAVAAQSILLNEVREITPPAPAAQEKASVRRETPVTRPPSMIIRVKPQAKKARIEPRSPEKAGSTTEIPDAKAKEPSKSAKTLDTNSDRPLEA-AIT

Query:  GLVSYSDESEDED
        GLVSYSDESEDED
Subjt:  GLVSYSDESEDED

XP_008466362.1 PREDICTED: protein FAM192A [Cucumis melo]

1.5e-96

94.84

Show/hide

Query:  MEDESARAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRDRPLFEILKENKDKRDAEFNERFKHRPPKALDEDETEFLDKLETSKREYERQMADADEQELR
        MEDES+RAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRDRPLFEILK+NKDKRDAEFNERFKHRPPKALDEDETEFLDKLETSKREYERQMADA+EQELR
Subjt:  MEDESARAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRDRPLFEILKENKDKRDAEFNERFKHRPPKALDEDETEFLDKLETSKREYERQMADADEQELR

Query:  SFQAAVAAQSILLNEVREITPPAPAAQEKASVRRETPVTRPPSMIIRVKPQAKKARIEPRSPEKAGSTTEIPDAKAKEPSKSAKTLDTNSDRPLE-AAIT
        SFQAAVAAQSILLNEVREITPPAPAAQEKASVRRETPV+RPPSMIIRVKPQAKKARIEPRSP+ AGS TEIP AKA+EPSKS KTLDTNSDRPLE AAIT
Subjt:  SFQAAVAAQSILLNEVREITPPAPAAQEKASVRRETPVTRPPSMIIRVKPQAKKARIEPRSPEKAGSTTEIPDAKAKEPSKSAKTLDTNSDRPLE-AAIT

Query:  GLVSYSDESEDED
        GLVSYSDESEDED
Subjt:  GLVSYSDESEDED

XP_022938625.1 uncharacterized protein LOC111444804 [Cucurbita moschata]

1.4e-91

91.08

Show/hide

Query:  MEDESARAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRDRPLFEILKENKDKRDAEFNERFKHRPPKALDEDETEFLDKLETSKREYERQMADADEQELR
        MEDESARAIRLM+FVSEEQLDEAKKTRGERVEDGTAQRDRPL+EILKENKDKRDAEFNERFKHRPPKALDEDETEFLDK ETSKREYERQMADADEQELR
Subjt:  MEDESARAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRDRPLFEILKENKDKRDAEFNERFKHRPPKALDEDETEFLDKLETSKREYERQMADADEQELR

Query:  SFQAAVAAQSILLNEVREITPPAPAAQEKASVRRETPVTRPPSMIIRVKPQAKKARIEPRSPEKAGSTTEIPDAKAKEPSKSAKTLDTNSDRPLEAAIT-
        SFQAAVAAQSILL+EVREITPPAPAAQEKA VR+ETPVTRPPSMIIRVKPQAKKARIEPRSPEKAGS  EI +AKA+E S+S +T DT+SDRPLEAA T 
Subjt:  SFQAAVAAQSILLNEVREITPPAPAAQEKASVRRETPVTRPPSMIIRVKPQAKKARIEPRSPEKAGSTTEIPDAKAKEPSKSAKTLDTNSDRPLEAAIT-

Query:  GLVSYSDESEDED
        GLVSYSDESEDED
Subjt:  GLVSYSDESEDED

XP_023549588.1 protein FAM192A [Cucurbita pepo subsp. pepo]

1.0e-92

91.55

Show/hide

Query:  MEDESARAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRDRPLFEILKENKDKRDAEFNERFKHRPPKALDEDETEFLDKLETSKREYERQMADADEQELR
        MEDESARAIRLM+FVSEEQLDEAKKTRGERVEDGTAQRDRPL+EILKENKDKRDAEFNERFKHRPPKALDEDETEFLDK ETSKREYERQMADADEQELR
Subjt:  MEDESARAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRDRPLFEILKENKDKRDAEFNERFKHRPPKALDEDETEFLDKLETSKREYERQMADADEQELR

Query:  SFQAAVAAQSILLNEVREITPPAPAAQEKASVRRETPVTRPPSMIIRVKPQAKKARIEPRSPEKAGSTTEIPDAKAKEPSKSAKTLDTNSDRPLEAAIT-
        SFQAAVAAQSILL+EVREITPPAPAAQEKA VR+ETPVTRPPSMIIRVKPQAKKARIEPRSPEKAGS  EIP+AKA+E S+S +T DT+SDRPLEAA T 
Subjt:  SFQAAVAAQSILLNEVREITPPAPAAQEKASVRRETPVTRPPSMIIRVKPQAKKARIEPRSPEKAGSTTEIPDAKAKEPSKSAKTLDTNSDRPLEAAIT-

Query:  GLVSYSDESEDED
        GLVSYSDESEDED
Subjt:  GLVSYSDESEDED

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KPX8 FAM192A_Fyv6_N domain-containing protein

3.4e-94

93.43

Show/hide

Query:  MEDESARAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRDRPLFEILKENKDKRDAEFNERFKHRPPKALDEDETEFLDKLETSKREYERQMADADEQELR
        MEDES+RAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRDRPLFEILKENKDKRDAEFNERFKHRPPKALDEDETEFLDKLETSKREYERQMA+A+EQELR
Subjt:  MEDESARAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRDRPLFEILKENKDKRDAEFNERFKHRPPKALDEDETEFLDKLETSKREYERQMADADEQELR

Query:  SFQAAVAAQSILLNEVREITPPAPAAQEKASVRRETPVTRPPSMIIRVKPQAKKARIEPRSPEKAGSTTEIPDAKAKEPSKSAKTLDTNSDRPLEA-AIT
        SFQAAVAAQSILL+EVREITPPAPAAQEKASVRRETPV+RPPSMIIRVKPQAKKARIEPRSP+ AGSTTEI  AKA+E S S KTLDTNSDRPLEA AIT
Subjt:  SFQAAVAAQSILLNEVREITPPAPAAQEKASVRRETPVTRPPSMIIRVKPQAKKARIEPRSPEKAGSTTEIPDAKAKEPSKSAKTLDTNSDRPLEA-AIT

Query:  GLVSYSDESEDED
        GLVSYSDESEDED
Subjt:  GLVSYSDESEDED

A0A1S3CR24 protein FAM192A

7.2e-97

94.84

Show/hide

Query:  MEDESARAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRDRPLFEILKENKDKRDAEFNERFKHRPPKALDEDETEFLDKLETSKREYERQMADADEQELR
        MEDES+RAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRDRPLFEILK+NKDKRDAEFNERFKHRPPKALDEDETEFLDKLETSKREYERQMADA+EQELR
Subjt:  MEDESARAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRDRPLFEILKENKDKRDAEFNERFKHRPPKALDEDETEFLDKLETSKREYERQMADADEQELR

Query:  SFQAAVAAQSILLNEVREITPPAPAAQEKASVRRETPVTRPPSMIIRVKPQAKKARIEPRSPEKAGSTTEIPDAKAKEPSKSAKTLDTNSDRPLE-AAIT
        SFQAAVAAQSILLNEVREITPPAPAAQEKASVRRETPV+RPPSMIIRVKPQAKKARIEPRSP+ AGS TEIP AKA+EPSKS KTLDTNSDRPLE AAIT
Subjt:  SFQAAVAAQSILLNEVREITPPAPAAQEKASVRRETPVTRPPSMIIRVKPQAKKARIEPRSPEKAGSTTEIPDAKAKEPSKSAKTLDTNSDRPLE-AAIT

Query:  GLVSYSDESEDED
        GLVSYSDESEDED
Subjt:  GLVSYSDESEDED

A0A5A7U2Y6 Protein FAM192A

7.2e-97

94.84

Show/hide

Query:  MEDESARAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRDRPLFEILKENKDKRDAEFNERFKHRPPKALDEDETEFLDKLETSKREYERQMADADEQELR
        MEDES+RAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRDRPLFEILK+NKDKRDAEFNERFKHRPPKALDEDETEFLDKLETSKREYERQMADA+EQELR
Subjt:  MEDESARAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRDRPLFEILKENKDKRDAEFNERFKHRPPKALDEDETEFLDKLETSKREYERQMADADEQELR

Query:  SFQAAVAAQSILLNEVREITPPAPAAQEKASVRRETPVTRPPSMIIRVKPQAKKARIEPRSPEKAGSTTEIPDAKAKEPSKSAKTLDTNSDRPLE-AAIT
        SFQAAVAAQSILLNEVREITPPAPAAQEKASVRRETPV+RPPSMIIRVKPQAKKARIEPRSP+ AGS TEIP AKA+EPSKS KTLDTNSDRPLE AAIT
Subjt:  SFQAAVAAQSILLNEVREITPPAPAAQEKASVRRETPVTRPPSMIIRVKPQAKKARIEPRSPEKAGSTTEIPDAKAKEPSKSAKTLDTNSDRPLE-AAIT

Query:  GLVSYSDESEDED
        GLVSYSDESEDED
Subjt:  GLVSYSDESEDED

A0A5D3BGC9 Protein FAM192A

7.2e-97

94.84

Show/hide

Query:  MEDESARAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRDRPLFEILKENKDKRDAEFNERFKHRPPKALDEDETEFLDKLETSKREYERQMADADEQELR
        MEDES+RAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRDRPLFEILK+NKDKRDAEFNERFKHRPPKALDEDETEFLDKLETSKREYERQMADA+EQELR
Subjt:  MEDESARAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRDRPLFEILKENKDKRDAEFNERFKHRPPKALDEDETEFLDKLETSKREYERQMADADEQELR

Query:  SFQAAVAAQSILLNEVREITPPAPAAQEKASVRRETPVTRPPSMIIRVKPQAKKARIEPRSPEKAGSTTEIPDAKAKEPSKSAKTLDTNSDRPLE-AAIT
        SFQAAVAAQSILLNEVREITPPAPAAQEKASVRRETPV+RPPSMIIRVKPQAKKARIEPRSP+ AGS TEIP AKA+EPSKS KTLDTNSDRPLE AAIT
Subjt:  SFQAAVAAQSILLNEVREITPPAPAAQEKASVRRETPVTRPPSMIIRVKPQAKKARIEPRSPEKAGSTTEIPDAKAKEPSKSAKTLDTNSDRPLE-AAIT

Query:  GLVSYSDESEDED
        GLVSYSDESEDED
Subjt:  GLVSYSDESEDED

A0A6J1FKA5 uncharacterized protein LOC111444804

7.0e-92

91.08

Show/hide

Query:  MEDESARAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRDRPLFEILKENKDKRDAEFNERFKHRPPKALDEDETEFLDKLETSKREYERQMADADEQELR
        MEDESARAIRLM+FVSEEQLDEAKKTRGERVEDGTAQRDRPL+EILKENKDKRDAEFNERFKHRPPKALDEDETEFLDK ETSKREYERQMADADEQELR
Subjt:  MEDESARAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRDRPLFEILKENKDKRDAEFNERFKHRPPKALDEDETEFLDKLETSKREYERQMADADEQELR

Query:  SFQAAVAAQSILLNEVREITPPAPAAQEKASVRRETPVTRPPSMIIRVKPQAKKARIEPRSPEKAGSTTEIPDAKAKEPSKSAKTLDTNSDRPLEAAIT-
        SFQAAVAAQSILL+EVREITPPAPAAQEKA VR+ETPVTRPPSMIIRVKPQAKKARIEPRSPEKAGS  EI +AKA+E S+S +T DT+SDRPLEAA T 
Subjt:  SFQAAVAAQSILLNEVREITPPAPAAQEKASVRRETPVTRPPSMIIRVKPQAKKARIEPRSPEKAGSTTEIPDAKAKEPSKSAKTLDTNSDRPLEAAIT-

Query:  GLVSYSDESEDED
        GLVSYSDESEDED
Subjt:  GLVSYSDESEDED

SwissProt top hits

e value

%identity

Alignment

Q91WE2 PSME3-interacting protein

7.4e-06

34.78

Show/hide

Query:  EDESARAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRD-----------RPLFEILKENKDKRDAEFNERFKHR-PPKALDEDETEFLDKLETSKREYER
        ED+S   I+   FVSE +LDE +K R E  E      D           R L+E L+E KD++  E+ E+FK +   + LDEDET FLD++   +   E+
Subjt:  EDESARAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRD-----------RPLFEILKENKDKRDAEFNERFKHR-PPKALDEDETEFLDKLETSKREYER

Query:  QMADADEQELRSFQA
        Q  + + +EL+ +++
Subjt:  QMADADEQELRSFQA

Arabidopsis top hits

e value

%identity

Alignment

AT3G62140.1 CONTAINS InterPro DOMAIN/s: NEFA-interacting nuclear protein NIP30, N-terminal (InterPro:IPR019331); Has 398 Blast hits to 395 proteins in 139 species: Archae - 0; Bacteria - 6; Metazoa - 193; Fungi - 83; Plants - 36; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink).

1.2e-54

56.89

Show/hide

Query:  MEDESARAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRDRPLFEILKENKDKRDAEFNERFKHRPPKALDEDETEFLDKLETSKREYERQMADADEQELR
        M DE+ + IRL+NFVSEEQLDE+KK RGERVEDGT QRDR L+EILKENKDK+DAEFNERFKHRPPKALDEDETEFLDKLE SKREYERQ+A+ ++++LR
Subjt:  MEDESARAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRDRPLFEILKENKDKRDAEFNERFKHRPPKALDEDETEFLDKLETSKREYERQMADADEQELR

Query:  SFQAAVAAQSILLNEVRE--ITPPAPAAQEKASVRRETPVTRPPSMIIRVKPQAKKARIEPRSPEKAGSTTEIPDAKAKEPSKSAKTLDTNSDRPLEAAI
        +FQAAVAA+S +L+E +E  + PPAP  +E+  + +  P TRP   II+VKPQ KKA+            TE  + +     K A  +D  S   ++  +
Subjt:  SFQAAVAAQSILLNEVRE--ITPPAPAAQEKASVRRETPVTRPPSMIIRVKPQAKKARIEPRSPEKAGSTTEIPDAKAKEPSKSAKTLDTNSDRPLEAAI

Query:  TG-----------LVSYSDESEDED
        TG           LVSYSDESED+D
Subjt:  TG-----------LVSYSDESEDED

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGAGGATGAATCTGCGCGAGCAATTAGGCTTATGAATTTCGTCTCTGAGGAGCAGTTGGATGAAGCCAAGAAAACAAGGGGCGAACGAGTTGAGGATGGCACTGCTCA
AAGAGACAGACCCCTCTTCGAGATTTTAAAGGAAAATAAAGACAAGCGTGATGCTGAGTTTAATGAACGGTTCAAGCACAGACCACCAAAGGCTCTGGACGAGGATGAGA
CAGAATTTCTGGATAAATTGGAGACGTCGAAGAGAGAATATGAAAGACAAATGGCTGATGCAGACGAACAAGAGCTTCGCAGTTTTCAAGCAGCAGTAGCAGCACAATCT
ATTTTGTTGAATGAAGTGAGGGAAATAACCCCGCCTGCTCCCGCAGCTCAGGAAAAAGCATCAGTCAGGAGAGAAACTCCGGTCACTCGACCCCCGAGTATGATTATTAG
AGTAAAGCCACAGGCAAAGAAAGCAAGGATCGAACCTAGAAGTCCAGAAAAAGCTGGTAGCACAACTGAAATCCCTGATGCCAAAGCAAAGGAGCCTTCAAAATCAGCAA
AAACACTTGATACCAATAGTGATAGGCCGCTTGAAGCTGCTATAACAGGACTTGTTTCGTATAGTGATGAAAGTGAAGATGAAGATTAG

mRNA sequence

Show/hide mRNA sequence

ATCAAACATAAAAATATAAAAGTTACATGAACTGGGTTCGATTCGGTGGGGTTCTTTATCAGAACTTCAGAAGCATTGTAAGGGAGAAAGTCGAAAGAGGGAAGAAGAGA
ACTCGCAGGGAAGTGACTTTGTAATATCTTAATCCCTTTTTGGCCTTTTCTTTTCGGTGAAATTTTGAAGTGTTCGAACTAGAGGGCAAGCGAGAATGGAGGATGAATCT
GCGCGAGCAATTAGGCTTATGAATTTCGTCTCTGAGGAGCAGTTGGATGAAGCCAAGAAAACAAGGGGCGAACGAGTTGAGGATGGCACTGCTCAAAGAGACAGACCCCT
CTTCGAGATTTTAAAGGAAAATAAAGACAAGCGTGATGCTGAGTTTAATGAACGGTTCAAGCACAGACCACCAAAGGCTCTGGACGAGGATGAGACAGAATTTCTGGATA
AATTGGAGACGTCGAAGAGAGAATATGAAAGACAAATGGCTGATGCAGACGAACAAGAGCTTCGCAGTTTTCAAGCAGCAGTAGCAGCACAATCTATTTTGTTGAATGAA
GTGAGGGAAATAACCCCGCCTGCTCCCGCAGCTCAGGAAAAAGCATCAGTCAGGAGAGAAACTCCGGTCACTCGACCCCCGAGTATGATTATTAGAGTAAAGCCACAGGC
AAAGAAAGCAAGGATCGAACCTAGAAGTCCAGAAAAAGCTGGTAGCACAACTGAAATCCCTGATGCCAAAGCAAAGGAGCCTTCAAAATCAGCAAAAACACTTGATACCA
ATAGTGATAGGCCGCTTGAAGCTGCTATAACAGGACTTGTTTCGTATAGTGATGAAAGTGAAGATGAAGATTAGACAATTGAGTTAGCTATTAGAATTTCCGAAACAATC
ACCATATTGTATTTAATTTTTTGTGTTGAGGTTCTGAAATGATGAAATCTTTTTCTGTAGCTTGTCAACTTTGATTATATATGTACATCTAACCCTTCATTGTTAAAATA
TTTCAGACAACTCTCAAGGATAATTTTTTATGAAATATTTAGGGGCTGGTTTCCATTGTGGTTAGGAGTTTGATATTTGACCAAGGCTATACTTGTCCCAAACTACATTA
TTTTTATATAGAGAAGTTTAATGGGTAG

Protein sequence

Show/hide protein sequence

MEDESARAIRLMNFVSEEQLDEAKKTRGERVEDGTAQRDRPLFEILKENKDKRDAEFNERFKHRPPKALDEDETEFLDKLETSKREYERQMADADEQELRSFQAAVAAQS
ILLNEVREITPPAPAAQEKASVRRETPVTRPPSMIIRVKPQAKKARIEPRSPEKAGSTTEIPDAKAKEPSKSAKTLDTNSDRPLEAAITGLVSYSDESEDED

Lsi09G007610 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome