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Lsi09G007630 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi09G007630
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionribonuclease P protein subunit p38
Genome locationchr09:8724988..8728577
RNA-Seq ExpressionLsi09G007630
SyntenyLsi09G007630
Gene Ontology termsGO:0043232 - intracellular non-membrane-bounded organelle (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050271.1 ribonuclease P protein subunit p38 isoform X5 [Cucumis melo var. makuwa]7.6e-4283.33Show/hide
Query:  MGKKPKSSA-PDAVVQSKPNKD-SYEGERLDELLQSIQRELKAARFLNAESLPEKIWLKKQFAIGVNEVTRILERMTPSGDSARIMNPNYKACTVKLQVV
        MGK PKSSA P A +QSKP +D SYEGERLDELL SIQRE+K AR LNAESLPEKIWLKKQ+AIGVNEVTR LERMTP GDSAR+MNPNYKAC VKLQVV
Subjt:  MGKKPKSSA-PDAVVQSKPNKD-SYEGERLDELLQSIQRELKAARFLNAESLPEKIWLKKQFAIGVNEVTRILERMTPSGDSARIMNPNYKACTVKLQVV

Query:  YSYIYVGQCHLGFR
        YS IYVGQC+LGFR
Subjt:  YSYIYVGQCHLGFR
TYJ98136.1 ribonuclease P protein subunit p38 isoform X6 [Cucumis melo var. makuwa]3.1e-4384.07Show/hide
Query:  MGKKPKSSA-PDAVVQSKPNKDSYEGERLDELLQSIQRELKAARFLNAESLPEKIWLKKQFAIGVNEVTRILERMTPSGDSARIMNPNYKACTVKLQVVY
        MGK PKSSA P A +QSKP +DSYEGERLDELL SIQRE+K AR LNAESLPEKIWLKKQ+AIGVNEVTR LERMTP GDSAR+MNPNYKAC VKLQVVY
Subjt:  MGKKPKSSA-PDAVVQSKPNKDSYEGERLDELLQSIQRELKAARFLNAESLPEKIWLKKQFAIGVNEVTRILERMTPSGDSARIMNPNYKACTVKLQVVY

Query:  SYIYVGQCHLGFR
        S IYVGQC+LGFR
Subjt:  SYIYVGQCHLGFR
XP_008466263.1 PREDICTED: uncharacterized protein LOC103503720 isoform X2 [Cucumis melo]4.0e-4384.07Show/hide
Query:  MGKKPKSSA-PDAVVQSKPNKDSYEGERLDELLQSIQRELKAARFLNAESLPEKIWLKKQFAIGVNEVTRILERMTPSGDSARIMNPNYKACTVKLQVVY
        MGK PKSSA P A +QSKP +DSYEGERLDELL SIQRE+K AR LNAESLPEK WLKKQFAIGVNEVTR LERMTP GDSAR+MNPNYKAC VKLQVVY
Subjt:  MGKKPKSSA-PDAVVQSKPNKDSYEGERLDELLQSIQRELKAARFLNAESLPEKIWLKKQFAIGVNEVTRILERMTPSGDSARIMNPNYKACTVKLQVVY

Query:  SYIYVGQCHLGFR
        S IYVGQC+LGFR
Subjt:  SYIYVGQCHLGFR
XP_016903668.1 PREDICTED: uncharacterized protein LOC103503720 isoform X4 [Cucumis melo]9.9e-4283.33Show/hide
Query:  MGKKPKSSA-PDAVVQSKPNKD-SYEGERLDELLQSIQRELKAARFLNAESLPEKIWLKKQFAIGVNEVTRILERMTPSGDSARIMNPNYKACTVKLQVV
        MGK PKSSA P A +QSKP +D SYEGERLDELL SIQRE+K AR LNAESLPEK WLKKQFAIGVNEVTR LERMTP GDSAR+MNPNYKAC VKLQVV
Subjt:  MGKKPKSSA-PDAVVQSKPNKD-SYEGERLDELLQSIQRELKAARFLNAESLPEKIWLKKQFAIGVNEVTRILERMTPSGDSARIMNPNYKACTVKLQVV

Query:  YSYIYVGQCHLGFR
        YS IYVGQC+LGFR
Subjt:  YSYIYVGQCHLGFR
XP_038875290.1 ribonuclease P protein subunit p38 [Benincasa hispida]4.5e-4291.84Show/hide
Query:  MGKKPKSSAPDAVVQSKPNKDSYEGERLDELLQSIQRELKAARFLNAESLPEKIWLKKQFAIGVNEVTRILERMTPSGDSARIMNPNYKACTVKLQVV
        MGKK KSSAPDAV+QSKPN+DSYEGERLDE LQSIQRE+K ARFLNAESLPEKIWLKKQFAIGVNEVTR+LERMTPSGDSARIMNPNYKACTVKLQ V
Subjt:  MGKKPKSSAPDAVVQSKPNKDSYEGERLDELLQSIQRELKAARFLNAESLPEKIWLKKQFAIGVNEVTRILERMTPSGDSARIMNPNYKACTVKLQVV
TrEMBL top hitse value%identityAlignment
A0A0A0KJ77 Uncharacterized protein2.2e-4281.58Show/hide
Query:  MGKKPKSSA-PDAVVQSKPNKD-SYEGERLDELLQSIQRELKAARFLNAESLPEKIWLKKQFAIGVNEVTRILERMTPSGDSARIMNPNYKACTVKLQVV
        MGK PKSS+ P A +QSKPN+D SYEGERLDELL SIQRE+K  R LNAESLPEK WLKKQFAIGVNEVTR+LERMTP GDSAR+MNPNYK CTVKLQV+
Subjt:  MGKKPKSSA-PDAVVQSKPNKD-SYEGERLDELLQSIQRELKAARFLNAESLPEKIWLKKQFAIGVNEVTRILERMTPSGDSARIMNPNYKACTVKLQVV

Query:  YSYIYVGQCHLGFR
        YS IYVGQC+LGFR
Subjt:  YSYIYVGQCHLGFR
A0A1S3CQU5 uncharacterized protein LOC103503720 isoform X21.9e-4384.07Show/hide
Query:  MGKKPKSSA-PDAVVQSKPNKDSYEGERLDELLQSIQRELKAARFLNAESLPEKIWLKKQFAIGVNEVTRILERMTPSGDSARIMNPNYKACTVKLQVVY
        MGK PKSSA P A +QSKP +DSYEGERLDELL SIQRE+K AR LNAESLPEK WLKKQFAIGVNEVTR LERMTP GDSAR+MNPNYKAC VKLQVVY
Subjt:  MGKKPKSSA-PDAVVQSKPNKDSYEGERLDELLQSIQRELKAARFLNAESLPEKIWLKKQFAIGVNEVTRILERMTPSGDSARIMNPNYKACTVKLQVVY

Query:  SYIYVGQCHLGFR
        S IYVGQC+LGFR
Subjt:  SYIYVGQCHLGFR
A0A1S4E613 uncharacterized protein LOC103503720 isoform X44.8e-4283.33Show/hide
Query:  MGKKPKSSA-PDAVVQSKPNKD-SYEGERLDELLQSIQRELKAARFLNAESLPEKIWLKKQFAIGVNEVTRILERMTPSGDSARIMNPNYKACTVKLQVV
        MGK PKSSA P A +QSKP +D SYEGERLDELL SIQRE+K AR LNAESLPEK WLKKQFAIGVNEVTR LERMTP GDSAR+MNPNYKAC VKLQVV
Subjt:  MGKKPKSSA-PDAVVQSKPNKD-SYEGERLDELLQSIQRELKAARFLNAESLPEKIWLKKQFAIGVNEVTRILERMTPSGDSARIMNPNYKACTVKLQVV

Query:  YSYIYVGQCHLGFR
        YS IYVGQC+LGFR
Subjt:  YSYIYVGQCHLGFR
A0A5A7U9R8 Ribonuclease P protein subunit p38 isoform X53.7e-4283.33Show/hide
Query:  MGKKPKSSA-PDAVVQSKPNKD-SYEGERLDELLQSIQRELKAARFLNAESLPEKIWLKKQFAIGVNEVTRILERMTPSGDSARIMNPNYKACTVKLQVV
        MGK PKSSA P A +QSKP +D SYEGERLDELL SIQRE+K AR LNAESLPEKIWLKKQ+AIGVNEVTR LERMTP GDSAR+MNPNYKAC VKLQVV
Subjt:  MGKKPKSSA-PDAVVQSKPNKD-SYEGERLDELLQSIQRELKAARFLNAESLPEKIWLKKQFAIGVNEVTRILERMTPSGDSARIMNPNYKACTVKLQVV

Query:  YSYIYVGQCHLGFR
        YS IYVGQC+LGFR
Subjt:  YSYIYVGQCHLGFR
A0A5D3BGG5 Ribonuclease P protein subunit p38 isoform X61.5e-4384.07Show/hide
Query:  MGKKPKSSA-PDAVVQSKPNKDSYEGERLDELLQSIQRELKAARFLNAESLPEKIWLKKQFAIGVNEVTRILERMTPSGDSARIMNPNYKACTVKLQVVY
        MGK PKSSA P A +QSKP +DSYEGERLDELL SIQRE+K AR LNAESLPEKIWLKKQ+AIGVNEVTR LERMTP GDSAR+MNPNYKAC VKLQVVY
Subjt:  MGKKPKSSA-PDAVVQSKPNKDSYEGERLDELLQSIQRELKAARFLNAESLPEKIWLKKQFAIGVNEVTRILERMTPSGDSARIMNPNYKACTVKLQVVY

Query:  SYIYVGQCHLGFR
        S IYVGQC+LGFR
Subjt:  SYIYVGQCHLGFR
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G01790.1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein4.0e-1745.38Show/hide
Query:  GKKPKSSAPDAVVQSKPNKDS--YEGERLDELLQSIQRELKAARFLNAESLPEKIWLKKQFAIGVNEVTRILERMTPSGDSARIMNPNYKACTVKLQVVY
        G  P +        S P K+S  YEGERL  LL  IQR ++ ++  N  SLPEKIWLKKQ AIG+NEVTR+LERM P+  S +  NP       +LQVV 
Subjt:  GKKPKSSAPDAVVQSKPNKDS--YEGERLDELLQSIQRELKAARFLNAESLPEKIWLKKQFAIGVNEVTRILERMTPSGDSARIMNPNYKACTVKLQVVY

Query:  SYIYVGQC--HLGFRNLPN
          I V  C   +  +++PN
Subjt:  SYIYVGQC--HLGFRNLPN

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAAAGAAGCCTAAATCTTCTGCTCCTGATGCAGTCGTTCAATCCAAACCTAACAAAGATTCCTACGAAGGGGAACGTCTCGATGAATTGCTACAATCGATTCAGAG
AGAGTTAAAGGCAGCAAGATTTCTGAATGCGGAATCCTTGCCGGAAAAAATTTGGCTTAAGAAACAATTCGCAATTGGAGTTAATGAGGTTACTAGAATCCTTGAACGGA
TGACACCAAGTGGAGATTCTGCTCGCATAATGAACCCTAATTATAAGGCGTGTACAGTCAAGCTTCAGGTAGTCTACTCTTATATTTATGTTGGACAATGCCATCTTGGG
TTTAGGAATTTGCCGAATGCGTAA
mRNA sequenceShow/hide mRNA sequence
GGAACGATGAGATAAGCTTCTTATGGCTTTCTCTCTCATTCTCCGTCCAATCGCAAAATCTCACTTCATTAGGAGCTAAATAGACATCTCTATCCACAACTGCATTACTT
CACCCAAAATTCAAATAAAGCTACGAGTAAGGCCGTGCTAGTTCGTCTTCATCAACGGATATATTAAGATGCCAGGAGGCATGTGGTGCCCTCAGATGCACTGGAGAAGG
CAGTTTTTACGTTCAGGAACTATATTTACAAGTTAGCCGCCACCGGTTCTGTTCCACTACGGTGTCTTCCAATCGGAGAACGCCGCCGTTATTTCTCTTTAGACTTTGAA
GCTTCACTTTCCAGCAAGTTTTCAGTCATGGGAAAGAAGCCTAAATCTTCTGCTCCTGATGCAGTCGTTCAATCCAAACCTAACAAAGATTCCTACGAAGGGGAACGTCT
CGATGAATTGCTACAATCGATTCAGAGAGAGTTAAAGGCAGCAAGATTTCTGAATGCGGAATCCTTGCCGGAAAAAATTTGGCTTAAGAAACAATTCGCAATTGGAGTTA
ATGAGGTTACTAGAATCCTTGAACGGATGACACCAAGTGGAGATTCTGCTCGCATAATGAACCCTAATTATAAGGCGTGTACAGTCAAGCTTCAGGTAGTCTACTCTTAT
ATTTATGTTGGACAATGCCATCTTGGGTTTAGGAATTTGCCGAATGCGTAATTAATAGAATCTTAGCTTTACCCTCCTACGGCAGTGTTGTTGATCTTCACTTAATTATT
TCTGGTGGATTGATGGACCCTTTCATTAGCTCGAAGTCACAAGTGTTACTTGGTTTTGTTTCAGTTTTGTGTCATTCTCATGCGTGCAAAATGGATGTGTTTATAATGTG
TGTGTGTCTCTTTCATGGGAAGAGGCAACCAATTTAAAACATGACCCACATTTGGAGCTTCCATGAGCTTTGGTGATAAGCTGGTTTAAACTTCCTAAGGCCCTCATTAT
TTTCATATAGTTTTTCTTTGGTGTGATGGTGTCCAATGATATCAACAAAATCCTTAGTGTAGTTAGCACGGTTACATGCCTTCTTGGGGAGTATGCTACTTGATTGGTAC
AGTCCATGAGCTATACTTGGCCACAGTAGAAAACTTCTACAAGAATGACCCATTGTTTATGTATCCTACAAAGTGTTGTTTTGTTTGTTTGTGAAGTATCCGATCTCAAT
GCTTGGTAATAGTATAAAGCAAATTTAGTGGCCATTACATAGTGTTCTTATGTAGCAAGAACTGGGATGAGGCTTTGAACTCCTATTGGTAAGTACTATTTCCTCCCTGG
TAAGCTTAATTTCTCACTAAAACATTCCATAGGCTTACCATTCTTGGATAGAACTGCTCCTATCCCTTTAGCAATGCAGCATCCATCTGGACTTCATTGATTCCCAATAC
GGATCCTAAGAATAACTGTTTTGTAAGAAGCATACACTTAGAGATATTAAAGTAAAGCTTGGTGGAATTTGGAGCAGTTTGTCATCTAAGTAGACAATTAGGAATTTACC
TGGTATGGTCATAATACATGTATCATGAGGCACATAAAAGTACTTGGAGCATTGATCGAGCTAAAACCTACATGCACAACTTGCCTTATTTGTAAAGACTCATCTGAGTC
TTAAAGGCTATTTTTCATTATCTCTTGGTTTGATTGCAGTGACTGCTTAATTGGCCTACAAGTTTTGAAAGTGGTTTCGTTTTGTTCAGGGAGTTGATATTTTATGGCAA
ACTTTCAACTCTATTTTCCATATGAAGTCTTTGTACCATTCTAGTTCAGCAGTGAATGCCATTGTGAATTCCTTAGGACAGGCATCCTTTTTATGCTTGATATATAACTC
TCAAGTGTTAATTCGACATTTCACCTTTTATTATGTAGGCTATACTGTTAACAGCTAATTGCAACCCTCGATGGCTGACAAACCATGTGCCAAGCTTGGCCATGTCTAGG
AAGGTACCATTGATACTCGTGAAAGATAAAGAGGGATCATTAAGGTTAGGTGAACTCGTTAACCTTAAAACAGCAATTGCAATTGGAATAAAGGCGAATGGGAGCCCTAT
TAATCAACTTATTGATGAAATTCTTCAAAGAACAACATAAAAACATGTTTCATGAGTACAACGAAGTTGTCTGGTGTACAGTAAAAATGATATGAAATTGAAGCAAATTC
TTGTCTTCTTCCCTCTAGCAGTCTGAGATTTCTAGTCTTGCTAATACACGAAATGGATTTGAGTTCATTTATTCTAGATAATGACCACCTCTAGCAGTCTGAGATTTCTA
AAGATACTAGATAGTTCATTAGACTTTTAGTTGGAAATAATGTATGGAAGTACAGTGTATCCTTATAAAGAGTTTGCAGAAGCCTGAGATGGTAGAATAGTAATTCTTAT
TTAATTCATTGATTAGTTGAGTTGGGGATTTCAAAATTTACTGTTGTTATTTTGACTTTTTTTTTCTTTCTATTATTTTAAAAGAGTTATGGTTGATAGAATTTAGAAAC
TTCATAATAACATGTGTCTTGCCCATTCGATTGGAAGTAATAGAGTGAAGAGATTACTTGTGTTTGGTATGCCTTTTGTTGTTTATGTAAGACATGTCTTTATATGG
Protein sequenceShow/hide protein sequence
MGKKPKSSAPDAVVQSKPNKDSYEGERLDELLQSIQRELKAARFLNAESLPEKIWLKKQFAIGVNEVTRILERMTPSGDSARIMNPNYKACTVKLQVVYSYIYVGQCHLG
FRNLPNA