; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi09G007690 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi09G007690
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr09:8776202..8787025
RNA-Seq ExpressionLsi09G007690
SyntenyLsi09G007690
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6401813.1 hypothetical protein SASPL_138680 [Salvia splendens]1.1e-0837.5Show/hide
Query:  KALVRTASSTAGEEENKAGVIDNIPGSWLLKATIAEAGLSLLFCWKWSRPTGKTKTSPFFMF---------VG--GGYESDVQFAVEDEDDLGGAWVRVR
        KAL  T+    G   N A  +  +PG WL K   A A +   F WKW RP G T  S   +F         +G  G  E DV+ A   E+  GG  V V 
Subjt:  KALVRTASSTAGEEENKAGVIDNIPGSWLLKATIAEAGLSLLFCWKWSRPTGKTKTSPFFMF---------VG--GGYESDVQFAVEDEDDLGGAWVRVR

Query:  WNQTTVRRVVDSVYGNAEGVEAGDLVDI
        W    +R  V++ +GNAE VEA +LVD+
Subjt:  WNQTTVRRVVDSVYGNAEGVEAGDLVDI

RWV81621.1 hypothetical protein GW17_00056938, partial [Ensete ventricosum]2.4e-0549.4Show/hide
Query:  VGGGYESDVQFAVEDEDDLGGAWVRVRWNQTTVRRVVDSVYGNAEGVEAGDLVDIGLRATEPDGVVDGG--GQHISPEVSRDH
        VGGG E+ V+ AVE EDDLGGA V VR  Q     VVD+ +G+A+GVEA DL+ +G R     G V G   GQ +  E S  H
Subjt:  VGGGYESDVQFAVEDEDDLGGAWVRVRWNQTTVRRVVDSVYGNAEGVEAGDLVDIGLRATEPDGVVDGG--GQHISPEVSRDH

TrEMBL top hitse value%identityAlignment
A0A0A9NYZ3 Uncharacterized protein4.9e-0462.5Show/hide
Query:  DNIPGSWLLKATIAEAGLSLLFCWKWSRPTGKTKTSPFFM
        D +PGSWLLKA +  AG S LF WK +RP G TKTSP  M
Subjt:  DNIPGSWLLKATIAEAGLSLLFCWKWSRPTGKTKTSPFFM

A0A444C6X6 Uncharacterized protein (Fragment)1.2e-0549.4Show/hide
Query:  VGGGYESDVQFAVEDEDDLGGAWVRVRWNQTTVRRVVDSVYGNAEGVEAGDLVDIGLRATEPDGVVDGG--GQHISPEVSRDH
        VGGG E+ V+ AVE EDDLGGA V VR  Q     VVD+ +G+A+GVEA DL+ +G R     G V G   GQ +  E S  H
Subjt:  VGGGYESDVQFAVEDEDDLGGAWVRVRWNQTTVRRVVDSVYGNAEGVEAGDLVDIGLRATEPDGVVDGG--GQHISPEVSRDH

A0A4D8ZUB9 Uncharacterized protein5.1e-0937.5Show/hide
Query:  KALVRTASSTAGEEENKAGVIDNIPGSWLLKATIAEAGLSLLFCWKWSRPTGKTKTSPFFMF---------VG--GGYESDVQFAVEDEDDLGGAWVRVR
        KAL  T+    G   N A  +  +PG WL K   A A +   F WKW RP G T  S   +F         +G  G  E DV+ A   E+  GG  V V 
Subjt:  KALVRTASSTAGEEENKAGVIDNIPGSWLLKATIAEAGLSLLFCWKWSRPTGKTKTSPFFMF---------VG--GGYESDVQFAVEDEDDLGGAWVRVR

Query:  WNQTTVRRVVDSVYGNAEGVEAGDLVDI
        W    +R  V++ +GNAE VEA +LVD+
Subjt:  WNQTTVRRVVDSVYGNAEGVEAGDLVDI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGGAGCATTCCTCGATTTAATCTCTCCCACCTCATCGGTTCCAATCTGGAAAGCTCTAGTTAGGACGGCGTCGTCGACGGCAGGAGAGGAGGAAAATAAGGCGGG
GGTGATCGACAATATTCCGGGCAGCTGGCTGTTGAAGGCGACGATAGCAGAAGCAGGTTTATCCTTGTTGTTCTGCTGGAAATGGAGTAGGCCTACGGGGAAGACAAAGA
CTTCGCCTTTTTTTATGTTTGTTGGCGGTGGTTATGAATCCGACGTCCAGTTCGCCGTCGAGGACGAAGATGATCTCGGTGGCGCGTGGGTGCGTGTGAGGTGGAACCAA
ACCACCGTTCGGCGAGTAGTCGACTCGGTTTATGGAAATGCCGAGGGTGTTGAGGCCGGGGACTTGGTTGACATTGGCTTGCGTGCCACTGAACCCGACGGAGTTGTTGA
TGGGGGCGGGCAACACATAAGTCCTGAAGTGAGTCGGGATCATAAGCGCGAAAACTGGGAATTGTTAGAAGAGGATGTAGAATTGGAAATGGAGACGTTGGCGGAGGTTC
TTGGAAGGGGAACAAACATTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGAGGAGCATTCCTCGATTTAATCTCTCCCACCTCATCGGTTCCAATCTGGAAAGCTCTAGTTAGGACGGCGTCGTCGACGGCAGGAGAGGAGGAAAATAAGGCGGG
GGTGATCGACAATATTCCGGGCAGCTGGCTGTTGAAGGCGACGATAGCAGAAGCAGGTTTATCCTTGTTGTTCTGCTGGAAATGGAGTAGGCCTACGGGGAAGACAAAGA
CTTCGCCTTTTTTTATGTTTGTTGGCGGTGGTTATGAATCCGACGTCCAGTTCGCCGTCGAGGACGAAGATGATCTCGGTGGCGCGTGGGTGCGTGTGAGGTGGAACCAA
ACCACCGTTCGGCGAGTAGTCGACTCGGTTTATGGAAATGCCGAGGGTGTTGAGGCCGGGGACTTGGTTGACATTGGCTTGCGTGCCACTGAACCCGACGGAGTTGTTGA
TGGGGGCGGGCAACACATAAGTCCTGAAGTGAGTCGGGATCATAAGCGCGAAAACTGGGAATTGTTAGAAGAGGATGTAGAATTGGAAATGGAGACGTTGGCGGAGGTTC
TTGGAAGGGGAACAAACATTTAG
Protein sequenceShow/hide protein sequence
MGGAFLDLISPTSSVPIWKALVRTASSTAGEEENKAGVIDNIPGSWLLKATIAEAGLSLLFCWKWSRPTGKTKTSPFFMFVGGGYESDVQFAVEDEDDLGGAWVRVRWNQ
TTVRRVVDSVYGNAEGVEAGDLVDIGLRATEPDGVVDGGGQHISPEVSRDHKRENWELLEEDVELEMETLAEVLGRGTNI