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Lsi09G007790 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi09G007790
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionIleal sodium/bile acid cotransporter, putative
Genome locationchr09:8864384..8864827
RNA-Seq ExpressionLsi09G007790
SyntenyLsi09G007790
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050246.1 putative Ileal sodium/bile acid cotransporter [Cucumis melo var. makuwa]2.3e-5682.31Show/hide
Query:  MNDLYSFITAINERNPGINSLPISIIMQRPPPANSSQTWNNLGKTILGLTFQAVLTLFISTPRSSPPVFTHLFGAAALISFAVSFAGFFLQNAFPRIACL
        MN+LYSFITAINERNP INSLPI I MQRP PANSS+T NN+GKTILGLTFQAVL LFI++P SSPP+ THLF AA LISFAVSFAG FLQN FPRIA L
Subjt:  MNDLYSFITAINERNPGINSLPISIIMQRPPPANSSQTWNNLGKTILGLTFQAVLTLFISTPRSSPPVFTHLFGAAALISFAVSFAGFFLQNAFPRIACL

Query:  FGKIGALIAAIGVCIIASLLLIHQNFAWISWLACGLSLMAFILSFKG
        F KIGALIAAIGVCI+AS LLIHQNFAWISWLA G SLMAF+LSF+G
Subjt:  FGKIGALIAAIGVCIIASLLLIHQNFAWISWLACGLSLMAFILSFKG

KAG6579136.1 hypothetical protein SDJN03_23584, partial [Cucurbita argyrosperma subsp. sororia]1.4e-3270.91Show/hide
Query:  QTWNNLGKTILGLTFQAVLTLFISTPRSSPPVFTHLFGAAALISFAVSFAGFFLQNAFPRIACLFGKIGALIAAIGVCIIASLLLIHQNFAWISWLACGL
        Q  NNLGK + GLTFQAVL LFISTP S PP+  +LF AA LIS A+S A  FLQ AFPRIA  FGKIGA++AA+G CI+ASLLL HQNF+WI WLACG 
Subjt:  QTWNNLGKTILGLTFQAVLTLFISTPRSSPPVFTHLFGAAALISFAVSFAGFFLQNAFPRIACLFGKIGALIAAIGVCIIASLLLIHQNFAWISWLACGL

Query:  SLMAFILSFK
        +LMAFILSFK
Subjt:  SLMAFILSFK

KAG6579137.1 hypothetical protein SDJN03_23585, partial [Cucurbita argyrosperma subsp. sororia]8.6e-3565.89Show/hide
Query:  NSLPISIIMQR-PPPANSSQTWNNLGKTILGLTFQAVLTLFISTPRSSPPVFTHLFGAAALISFAVSFAGFFLQNAFPRIACLFGKIGALIAAIGVCIIA
        + LP +  M R PPP +SSQT NNLGK + GLTFQAVL LFIS P S PP+  H+F AA LISFA+S A  FLQ A+PRIA   GKIGAL+AAIG C I 
Subjt:  NSLPISIIMQR-PPPANSSQTWNNLGKTILGLTFQAVLTLFISTPRSSPPVFTHLFGAAALISFAVSFAGFFLQNAFPRIACLFGKIGALIAAIGVCIIA

Query:  SLLLIHQNFAWISWLACGLSLMAFILSFK
        S+LL HQ+F+WI WLACG +LMAFILSFK
Subjt:  SLLLIHQNFAWISWLACGLSLMAFILSFK

KGN49803.1 hypothetical protein Csa_004681 [Cucumis sativus]4.6e-5278.23Show/hide
Query:  MNDLYSFITAINERNPGINSLPISIIMQRPPPANSSQTWNNLGKTILGLTFQAVLTLFISTPRSSPPVFTHLFGAAALISFAVSFAGFFLQNAFPRIACL
        MN LYS IT+INERNP IN LPI IIMQ   PANSS+T NN+G TILGLTFQAVL LFI++  SSPP+ THLFGAA LISFAVSF G FLQ+ FPRIA L
Subjt:  MNDLYSFITAINERNPGINSLPISIIMQRPPPANSSQTWNNLGKTILGLTFQAVLTLFISTPRSSPPVFTHLFGAAALISFAVSFAGFFLQNAFPRIACL

Query:  FGKIGALIAAIGVCIIASLLLIHQNFAWISWLACGLSLMAFILSFKG
        F KIGALIAAIGVCI+AS LLIHQNFAWISWLACG SLMAF+LSF+G
Subjt:  FGKIGALIAAIGVCIIASLLLIHQNFAWISWLACGLSLMAFILSFKG

KGN49808.1 hypothetical protein Csa_004650 [Cucumis sativus]3.1e-3255.19Show/hide
Query:  MNDLYSFITAINERNPGI-------NSLPISIIMQRPPPANSSQTWNNLGKTILGLTFQAVLTLFISTPRSS-PPVFTHLFGAAALISFAVSFAGFFLQN
        M+   SFI  I++RN G+       N LP+ I MQ+ P A +  +   LGK IL L+FQAVL LFIS+P +S PP+  H F AA  ISFAVSFA  FL N
Subjt:  MNDLYSFITAINERNPGI-------NSLPISIIMQRPPPANSSQTWNNLGKTILGLTFQAVLTLFISTPRSS-PPVFTHLFGAAALISFAVSFAGFFLQN

Query:  AFPRIACLFGKIGALIAAIGVCIIASLLLIHQNFAWISWLACGLSLMAFILSFK
        +FPR A LF K+GAL +A GVC IAS LL+HQNFAWI W+AC  S++ F LSFK
Subjt:  AFPRIACLFGKIGALIAAIGVCIIASLLLIHQNFAWISWLACGLSLMAFILSFK

TrEMBL top hitse value%identityAlignment
A0A0A0KJN8 Uncharacterized protein2.2e-5278.23Show/hide
Query:  MNDLYSFITAINERNPGINSLPISIIMQRPPPANSSQTWNNLGKTILGLTFQAVLTLFISTPRSSPPVFTHLFGAAALISFAVSFAGFFLQNAFPRIACL
        MN LYS IT+INERNP IN LPI IIMQ   PANSS+T NN+G TILGLTFQAVL LFI++  SSPP+ THLFGAA LISFAVSF G FLQ+ FPRIA L
Subjt:  MNDLYSFITAINERNPGINSLPISIIMQRPPPANSSQTWNNLGKTILGLTFQAVLTLFISTPRSSPPVFTHLFGAAALISFAVSFAGFFLQNAFPRIACL

Query:  FGKIGALIAAIGVCIIASLLLIHQNFAWISWLACGLSLMAFILSFKG
        F KIGALIAAIGVCI+AS LLIHQNFAWISWLACG SLMAF+LSF+G
Subjt:  FGKIGALIAAIGVCIIASLLLIHQNFAWISWLACGLSLMAFILSFKG

A0A0A0KJP2 Uncharacterized protein1.5e-3255.19Show/hide
Query:  MNDLYSFITAINERNPGI-------NSLPISIIMQRPPPANSSQTWNNLGKTILGLTFQAVLTLFISTPRSS-PPVFTHLFGAAALISFAVSFAGFFLQN
        M+   SFI  I++RN G+       N LP+ I MQ+ P A +  +   LGK IL L+FQAVL LFIS+P +S PP+  H F AA  ISFAVSFA  FL N
Subjt:  MNDLYSFITAINERNPGI-------NSLPISIIMQRPPPANSSQTWNNLGKTILGLTFQAVLTLFISTPRSS-PPVFTHLFGAAALISFAVSFAGFFLQN

Query:  AFPRIACLFGKIGALIAAIGVCIIASLLLIHQNFAWISWLACGLSLMAFILSFK
        +FPR A LF K+GAL +A GVC IAS LL+HQNFAWI W+AC  S++ F LSFK
Subjt:  AFPRIACLFGKIGALIAAIGVCIIASLLLIHQNFAWISWLACGLSLMAFILSFK

A0A0A0KQ03 Uncharacterized protein6.1e-2652.87Show/hide
Query:  MNDLYSFITAINERNPGINS----------LPISIIMQRPPPANSSQTWNNLGKTILGLTFQAVLTLFIS-TPRSSPPVFTHLFGAAALISFAVSFAGFF
        MN L S I A+  RNPGI+S          LPI I MQRP P NS Q     G T L LTFQA++ LF+S  P SS P+ + LF A  L SF  S+ G  
Subjt:  MNDLYSFITAINERNPGINS----------LPISIIMQRPPPANSSQTWNNLGKTILGLTFQAVLTLFIS-TPRSSPPVFTHLFGAAALISFAVSFAGFF

Query:  LQNAFPRIACLFGKIGALIAAIGVCIIASLLLIHQNFAWISWLACGLSLMAFILSFK
        LQ  FP+ A L    GAL AAIG CII SLLL + NF WI WLA GL L AFI+SFK
Subjt:  LQNAFPRIACLFGKIGALIAAIGVCIIASLLLIHQNFAWISWLACGLSLMAFILSFK

A0A5A7U7U1 Putative Ileal sodium/bile acid cotransporter1.1e-5682.31Show/hide
Query:  MNDLYSFITAINERNPGINSLPISIIMQRPPPANSSQTWNNLGKTILGLTFQAVLTLFISTPRSSPPVFTHLFGAAALISFAVSFAGFFLQNAFPRIACL
        MN+LYSFITAINERNP INSLPI I MQRP PANSS+T NN+GKTILGLTFQAVL LFI++P SSPP+ THLF AA LISFAVSFAG FLQN FPRIA L
Subjt:  MNDLYSFITAINERNPGINSLPISIIMQRPPPANSSQTWNNLGKTILGLTFQAVLTLFISTPRSSPPVFTHLFGAAALISFAVSFAGFFLQNAFPRIACL

Query:  FGKIGALIAAIGVCIIASLLLIHQNFAWISWLACGLSLMAFILSFKG
        F KIGALIAAIGVCI+AS LLIHQNFAWISWLA G SLMAF+LSF+G
Subjt:  FGKIGALIAAIGVCIIASLLLIHQNFAWISWLACGLSLMAFILSFKG

A0A5D3BEH8 Putative Ileal sodium/bile acid cotransporter1.0e-2853.21Show/hide
Query:  MNDLYSFITAINERNPGINS----------LPISIIMQRPPPANSSQTWNNLGKTILGLTFQAVLTLFISTPRSSPPVFTHLFGAAALISFAVSFAGFFL
        MN+LYSFITA+  RNPGI+S          LPI I MQRP P NS Q     G T +   FQA+L LF++ P S PP+ + L G   L +F  SF G  L
Subjt:  MNDLYSFITAINERNPGINS----------LPISIIMQRPPPANSSQTWNNLGKTILGLTFQAVLTLFISTPRSSPPVFTHLFGAAALISFAVSFAGFFL

Query:  QNAFPRIACLFGKIGALIAAIGVCIIASLLLIHQNFAWISWLACGLSLMAFILSFK
        Q  FP+IA L    GAL+AAIGVCI+ S LL H N  WI WLACGL L AFI SFK
Subjt:  QNAFPRIACLFGKIGALIAAIGVCIIASLLLIHQNFAWISWLACGLSLMAFILSFK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATGATCTCTATTCCTTCATCACAGCAATTAATGAAAGAAATCCTGGAATCAACAGCTTACCGATTTCTATCATAATGCAGAGGCCTCCACCAGCCAACAGCTCTCA
GACTTGGAATAATCTTGGGAAGACAATTCTTGGCCTTACTTTTCAGGCAGTTTTAACCTTGTTCATTAGCACACCAAGGTCATCCCCTCCAGTTTTTACACACCTCTTTG
GGGCTGCAGCGTTGATTAGCTTTGCAGTTTCATTTGCTGGATTTTTCCTTCAAAATGCATTCCCAAGAATCGCGTGTTTGTTCGGAAAGATCGGTGCTCTTATCGCTGCA
ATTGGTGTGTGCATCATAGCAAGTCTTCTTCTAATCCATCAGAACTTTGCTTGGATCTCTTGGCTGGCATGTGGCCTCTCCTTGATGGCTTTTATTCTATCATTTAAAGG
GTAG
mRNA sequenceShow/hide mRNA sequence
ATGAATGATCTCTATTCCTTCATCACAGCAATTAATGAAAGAAATCCTGGAATCAACAGCTTACCGATTTCTATCATAATGCAGAGGCCTCCACCAGCCAACAGCTCTCA
GACTTGGAATAATCTTGGGAAGACAATTCTTGGCCTTACTTTTCAGGCAGTTTTAACCTTGTTCATTAGCACACCAAGGTCATCCCCTCCAGTTTTTACACACCTCTTTG
GGGCTGCAGCGTTGATTAGCTTTGCAGTTTCATTTGCTGGATTTTTCCTTCAAAATGCATTCCCAAGAATCGCGTGTTTGTTCGGAAAGATCGGTGCTCTTATCGCTGCA
ATTGGTGTGTGCATCATAGCAAGTCTTCTTCTAATCCATCAGAACTTTGCTTGGATCTCTTGGCTGGCATGTGGCCTCTCCTTGATGGCTTTTATTCTATCATTTAAAGG
GTAG
Protein sequenceShow/hide protein sequence
MNDLYSFITAINERNPGINSLPISIIMQRPPPANSSQTWNNLGKTILGLTFQAVLTLFISTPRSSPPVFTHLFGAAALISFAVSFAGFFLQNAFPRIACLFGKIGALIAA
IGVCIIASLLLIHQNFAWISWLACGLSLMAFILSFKG