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Lsi09G007810 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi09G007810
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionIleal sodium/bile acid cotransporter, putative
Genome locationchr09:8883466..8884380
RNA-Seq ExpressionLsi09G007810
SyntenyLsi09G007810
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050244.1 putative Ileal sodium/bile acid cotransporter [Cucumis melo var. makuwa]1.6e-3264.96Show/hide
Query:  MAAATPHETSLDMNQLYSFITAVTKRNPGISSCTWG--ASDCLPIHIKMERP-PVNSPPQLGKIFLSLTFQAILALFFSLSSSSPPLPTVLFGAVMLIGF
        MA   PHE SLDMN+LYSFITAVT RNPGISSCTWG  ASDCLPI+IKM+RP PVNS PQ G  F+S  FQAIL LF +L  S PPL + L G VML  F
Subjt:  MAAATPHETSLDMNQLYSFITAVTKRNPGISSCTWG--ASDCLPIHIKMERP-PVNSPPQLGKIFLSLTFQAILALFFSLSSSSPPLPTVLFGAVMLIGF

Query:  AVSFAGVLLQNAFLKIALLLEKLGALFAAIASFLLRS
          SF GVLLQ  F KIA LL+  GAL AAI   ++ S
Subjt:  AVSFAGVLLQNAFLKIALLLEKLGALFAAIASFLLRS

KAA0050246.1 putative Ileal sodium/bile acid cotransporter [Cucumis melo var. makuwa]9.9e-2256.35Show/hide
Query:  MNQLYSFITAVTKRNPGISSCTWGASDCLPIHIKMERP-PVNSPP---QLGKIFLSLTFQAILALFFSLSSSSPPLPTVLFGAVMLIGFAVSFAGVLLQN
        MN+LYSFITA+ +RNP I+S        LPI I M+RP P NS      +GK  L LTFQA+LALF +  +SSPPL T LF A +LI FAVSFAG+ LQN
Subjt:  MNQLYSFITAVTKRNPGISSCTWGASDCLPIHIKMERP-PVNSPP---QLGKIFLSLTFQAILALFFSLSSSSPPLPTVLFGAVMLIGFAVSFAGVLLQN

Query:  AFLKIALLLEKLGALFAAIASFLLRS
         F +IALL EK+GAL AAI   ++ S
Subjt:  AFLKIALLLEKLGALFAAIASFLLRS

KAG6601930.1 hypothetical protein SDJN03_07163, partial [Cucurbita argyrosperma subsp. sororia]2.1e-2452.73Show/hide
Query:  MAAATPHETSLDMNQLYSFITAVTKRNPGISSCTWGASDCLP-----IHIKMERP---PVNSPPQLGKIFLSLTFQAILALFFSL-SSSSPPLPTVLFGA
        M +AT  ETSLDM                 SS TWG     P     I+IKM  P   P NSP  LGK  L+LTFQAILAL  S  + SS PLPTVLF A
Subjt:  MAAATPHETSLDMNQLYSFITAVTKRNPGISSCTWGASDCLP-----IHIKMERP---PVNSPPQLGKIFLSLTFQAILALFFSL-SSSSPPLPTVLFGA

Query:  VMLIGFAVSFAGVLLQNAFLKIALLLEKLGALFAAIASFLLRSRSQARTKEEGSVIRPLDLELVL
         M I F VSFAGV L+N F +IALLLEKLGALF AI   +  +  +  TKEEG VIRPL+L+ VL
Subjt:  VMLIGFAVSFAGVLLQNAFLKIALLLEKLGALFAAIASFLLRSRSQARTKEEGSVIRPLDLELVL

KGN49806.1 hypothetical protein Csa_004683 [Cucumis sativus]7.3e-3365.22Show/hide
Query:  MAAATPHETSLDMNQLYSFITAVTKRNPGISSCTWG--ASDCLPIHIKMERP-PVNSPPQLGKIFLSLTFQAILALFFSLS-SSSPPLPTVLFGAVMLIG
        MA   PHE SLDMN+L S I AVT RNPGISSCTWG  ASDCLPI+IKM+RP PVNS PQ G  FLSLTFQAI+ LF SL+ SSS PLP+ LF AVML  
Subjt:  MAAATPHETSLDMNQLYSFITAVTKRNPGISSCTWG--ASDCLPIHIKMERP-PVNSPPQLGKIFLSLTFQAILALFFSLS-SSSPPLPTVLFGAVMLIG

Query:  FAVSFAGVLLQNAFLKIALLLEKLGALFAAIASFLLRS
        F  S+ GV+LQ  F K A LL+  GALFAAI + ++ S
Subjt:  FAVSFAGVLLQNAFLKIALLLEKLGALFAAIASFLLRS

XP_022146444.1 uncharacterized protein LOC111015658 [Momordica charantia]3.8e-2962.6Show/hide
Query:  AATPHETSLDMNQLYSFITAVTKRNPGISSCTWGA-----SDCLPIHIKMER-PPVNSPPQLGKIFLSLTFQAILALFFSLSSSSPPLPTVLFGAVMLIG
        A+TP +TS+DMN L SFITA+ +RN GISS TWG      SDCLPI I+M+R PP  S   LGK  L LTFQA+LALF SL SS P LPT+LFGA +LI 
Subjt:  AATPHETSLDMNQLYSFITAVTKRNPGISSCTWGA-----SDCLPIHIKMER-PPVNSPPQLGKIFLSLTFQAILALFFSLSSSSPPLPTVLFGAVMLIG

Query:  FAVSFAGVLLQNAFLKIALLLEK
        FAVSFAG+ LQ A+ ++ALL EK
Subjt:  FAVSFAGVLLQNAFLKIALLLEK

TrEMBL top hitse value%identityAlignment
A0A0A0KJP2 Uncharacterized protein2.0e-2049.64Show/hide
Query:  AATPHETSLDMNQLYSFITAVTKRNPGISSCTWGASDCLPIHIKMERPP---VNSPPQLGKIFLSLTFQAILALFFSL-SSSSPPLPTVLFGAVMLIGFA
        A+T H+TSLDM+   SFI  +++RN G+  C    S+CLP+ I+M++ P    +S  +LGKI LSL+FQA+LALF S   +S PPL    F A + I FA
Subjt:  AATPHETSLDMNQLYSFITAVTKRNPGISSCTWGASDCLPIHIKMERPP---VNSPPQLGKIFLSLTFQAILALFFSL-SSSSPPLPTVLFGAVMLIGFA

Query:  VSFAGVLLQNAFLKIALLLEKLGALFAA-----IASFLL
        VSFA + L N+F + A L EK+GALF+A     IASFLL
Subjt:  VSFAGVLLQNAFLKIALLLEKLGALFAA-----IASFLL

A0A0A0KQ03 Uncharacterized protein3.6e-3365.22Show/hide
Query:  MAAATPHETSLDMNQLYSFITAVTKRNPGISSCTWG--ASDCLPIHIKMERP-PVNSPPQLGKIFLSLTFQAILALFFSLS-SSSPPLPTVLFGAVMLIG
        MA   PHE SLDMN+L S I AVT RNPGISSCTWG  ASDCLPI+IKM+RP PVNS PQ G  FLSLTFQAI+ LF SL+ SSS PLP+ LF AVML  
Subjt:  MAAATPHETSLDMNQLYSFITAVTKRNPGISSCTWG--ASDCLPIHIKMERP-PVNSPPQLGKIFLSLTFQAILALFFSLS-SSSPPLPTVLFGAVMLIG

Query:  FAVSFAGVLLQNAFLKIALLLEKLGALFAAIASFLLRS
        F  S+ GV+LQ  F K A LL+  GALFAAI + ++ S
Subjt:  FAVSFAGVLLQNAFLKIALLLEKLGALFAAIASFLLRS

A0A5A7U7U1 Putative Ileal sodium/bile acid cotransporter4.8e-2256.35Show/hide
Query:  MNQLYSFITAVTKRNPGISSCTWGASDCLPIHIKMERP-PVNSPP---QLGKIFLSLTFQAILALFFSLSSSSPPLPTVLFGAVMLIGFAVSFAGVLLQN
        MN+LYSFITA+ +RNP I+S        LPI I M+RP P NS      +GK  L LTFQA+LALF +  +SSPPL T LF A +LI FAVSFAG+ LQN
Subjt:  MNQLYSFITAVTKRNPGISSCTWGASDCLPIHIKMERP-PVNSPP---QLGKIFLSLTFQAILALFFSLSSSSPPLPTVLFGAVMLIGFAVSFAGVLLQN

Query:  AFLKIALLLEKLGALFAAIASFLLRS
         F +IALL EK+GAL AAI   ++ S
Subjt:  AFLKIALLLEKLGALFAAIASFLLRS

A0A5D3BEH8 Putative Ileal sodium/bile acid cotransporter7.9e-3364.96Show/hide
Query:  MAAATPHETSLDMNQLYSFITAVTKRNPGISSCTWG--ASDCLPIHIKMERP-PVNSPPQLGKIFLSLTFQAILALFFSLSSSSPPLPTVLFGAVMLIGF
        MA   PHE SLDMN+LYSFITAVT RNPGISSCTWG  ASDCLPI+IKM+RP PVNS PQ G  F+S  FQAIL LF +L  S PPL + L G VML  F
Subjt:  MAAATPHETSLDMNQLYSFITAVTKRNPGISSCTWG--ASDCLPIHIKMERP-PVNSPPQLGKIFLSLTFQAILALFFSLSSSSPPLPTVLFGAVMLIGF

Query:  AVSFAGVLLQNAFLKIALLLEKLGALFAAIASFLLRS
          SF GVLLQ  F KIA LL+  GAL AAI   ++ S
Subjt:  AVSFAGVLLQNAFLKIALLLEKLGALFAAIASFLLRS

A0A6J1CY58 uncharacterized protein LOC1110156581.8e-2962.6Show/hide
Query:  AATPHETSLDMNQLYSFITAVTKRNPGISSCTWGA-----SDCLPIHIKMER-PPVNSPPQLGKIFLSLTFQAILALFFSLSSSSPPLPTVLFGAVMLIG
        A+TP +TS+DMN L SFITA+ +RN GISS TWG      SDCLPI I+M+R PP  S   LGK  L LTFQA+LALF SL SS P LPT+LFGA +LI 
Subjt:  AATPHETSLDMNQLYSFITAVTKRNPGISSCTWGA-----SDCLPIHIKMER-PPVNSPPQLGKIFLSLTFQAILALFFSLSSSSPPLPTVLFGAVMLIG

Query:  FAVSFAGVLLQNAFLKIALLLEK
        FAVSFAG+ LQ A+ ++ALL EK
Subjt:  FAVSFAGVLLQNAFLKIALLLEK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGCAGCTACTCCACATGAAACCTCCCTAGATATGAATCAACTCTATTCCTTCATCACTGCAGTCACAAAGAGAAATCCTGGAATAAGCAGTTGTACCTGGGGAGC
ATCAGATTGCCTGCCAATTCACATCAAAATGGAGAGGCCACCAGTCAACAGTCCCCCTCAGCTTGGGAAGATATTTCTTAGTCTAACTTTTCAGGCAATTTTAGCCTTGT
TTTTCAGCTTATCCTCTTCATCTCCTCCATTACCTACTGTTCTGTTTGGGGCTGTTATGTTGATTGGCTTTGCAGTTTCATTTGCTGGAGTTCTCCTTCAAAATGCATTC
CTAAAAATTGCACTTCTGTTGGAAAAGTTGGGTGCTCTGTTTGCTGCAATTGCATCATTTCTTCTACGCAGCCGGTCCCAAGCCCGGACAAAGGAGGAGGGTAGTGTCAT
CAGACCATTGGATCTTGAGCTTGTTCTAAAAGACAGAGGCTTGAAGTATAGACATACAGAGGAACCACATATTGCTGAAGCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCAGCAGCTACTCCACATGAAACCTCCCTAGATATGAATCAACTCTATTCCTTCATCACTGCAGTCACAAAGAGAAATCCTGGAATAAGCAGTTGTACCTGGGGAGC
ATCAGATTGCCTGCCAATTCACATCAAAATGGAGAGGCCACCAGTCAACAGTCCCCCTCAGCTTGGGAAGATATTTCTTAGTCTAACTTTTCAGGCAATTTTAGCCTTGT
TTTTCAGCTTATCCTCTTCATCTCCTCCATTACCTACTGTTCTGTTTGGGGCTGTTATGTTGATTGGCTTTGCAGTTTCATTTGCTGGAGTTCTCCTTCAAAATGCATTC
CTAAAAATTGCACTTCTGTTGGAAAAGTTGGGTGCTCTGTTTGCTGCAATTGCATCATTTCTTCTACGCAGCCGGTCCCAAGCCCGGACAAAGGAGGAGGGTAGTGTCAT
CAGACCATTGGATCTTGAGCTTGTTCTAAAAGACAGAGGCTTGAAGTATAGACATACAGAGGAACCACATATTGCTGAAGCTTAG
Protein sequenceShow/hide protein sequence
MAAATPHETSLDMNQLYSFITAVTKRNPGISSCTWGASDCLPIHIKMERPPVNSPPQLGKIFLSLTFQAILALFFSLSSSSPPLPTVLFGAVMLIGFAVSFAGVLLQNAF
LKIALLLEKLGALFAAIASFLLRSRSQARTKEEGSVIRPLDLELVLKDRGLKYRHTEEPHIAEA