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Lsi09G008070 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi09G008070
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionprotein trichome birefringence-like 38
Genome locationchr09:9272105..9272347
RNA-Seq ExpressionLsi09G008070
SyntenyLsi09G008070
Gene Ontology termsGO:0005794 - Golgi apparatus (cellular component)
GO:0016413 - O-acetyltransferase activity (molecular function)
InterPro domainsIPR026057 - PC-Esterase
IPR029962 - Trichome birefringence-like family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0066034.1 protein trichome birefringence-like 38 [Cucumis melo var. makuwa]1.4e-3487.34Show/hide
Query:  PINGSTYPGGLPAASMTVQQVLSQISKPIHLLNITTLSQFRKDAHPSSYNGFKGMDCTHWCIAGLPDTWNQLLYAALIS
        PINGSTYPGGLPAAS T+++VLS+++KPIH+LNITTLSQ RKDAHPSSYNGFKGMDCTHWCIAGLPDTWNQLLYA LIS
Subjt:  PINGSTYPGGLPAASMTVQQVLSQISKPIHLLNITTLSQFRKDAHPSSYNGFKGMDCTHWCIAGLPDTWNQLLYAALIS

KAE8648461.1 hypothetical protein Csa_008991 [Cucumis sativus]5.2e-3486.08Show/hide
Query:  PINGSTYPGGLPAASMTVQQVLSQISKPIHLLNITTLSQFRKDAHPSSYNGFKGMDCTHWCIAGLPDTWNQLLYAALIS
        PINGSTYPGGLPAAS+T+++VLS++SKPI +LNITTLSQ RKDAHPSSYNGF+GMDCTHWCIAGLPDTWNQLLYA LIS
Subjt:  PINGSTYPGGLPAASMTVQQVLSQISKPIHLLNITTLSQFRKDAHPSSYNGFKGMDCTHWCIAGLPDTWNQLLYAALIS

XP_008437676.1 PREDICTED: protein trichome birefringence-like 38 [Cucumis melo]1.4e-3487.34Show/hide
Query:  PINGSTYPGGLPAASMTVQQVLSQISKPIHLLNITTLSQFRKDAHPSSYNGFKGMDCTHWCIAGLPDTWNQLLYAALIS
        PINGSTYPGGLPAAS T+++VLS+++KPIH+LNITTLSQ RKDAHPSSYNGFKGMDCTHWCIAGLPDTWNQLLYA LIS
Subjt:  PINGSTYPGGLPAASMTVQQVLSQISKPIHLLNITTLSQFRKDAHPSSYNGFKGMDCTHWCIAGLPDTWNQLLYAALIS

XP_022157890.1 protein trichome birefringence-like 38 [Momordica charantia]1.4e-3489.87Show/hide
Query:  PINGSTYPGGLPAASMTVQQVLSQISKPIHLLNITTLSQFRKDAHPSSYNGFKGMDCTHWCIAGLPDTWNQLLYAALIS
        P+ GSTYPGGLPAAS TVQQVL++I KPIHLLNITTLSQ RKDAHPSSYNGF+GMDCTHWCIAGLPDTWNQLLYAALIS
Subjt:  PINGSTYPGGLPAASMTVQQVLSQISKPIHLLNITTLSQFRKDAHPSSYNGFKGMDCTHWCIAGLPDTWNQLLYAALIS

XP_038875887.1 protein trichome birefringence-like 38 [Benincasa hispida]5.0e-3792.5Show/hide
Query:  MPINGSTYPGGLPAASMTVQQVLSQISKPIHLLNITTLSQFRKDAHPSSYNGFKGMDCTHWCIAGLPDTWNQLLYAALIS
        +PINGSTYPGGLPAAS+T+QQVLS+ISKP+HLLNITTLSQ RKDAHPSSYNGFKGMDCTHWCIAGLPDTWNQLLYAALIS
Subjt:  MPINGSTYPGGLPAASMTVQQVLSQISKPIHLLNITTLSQFRKDAHPSSYNGFKGMDCTHWCIAGLPDTWNQLLYAALIS

TrEMBL top hitse value%identityAlignment
A0A0A0KQF6 Uncharacterized protein2.5e-3486.08Show/hide
Query:  PINGSTYPGGLPAASMTVQQVLSQISKPIHLLNITTLSQFRKDAHPSSYNGFKGMDCTHWCIAGLPDTWNQLLYAALIS
        PINGSTYPGGLPAAS+T+++VLS++SKPI +LNITTLSQ RKDAHPSSYNGF+GMDCTHWCIAGLPDTWNQLLYA LIS
Subjt:  PINGSTYPGGLPAASMTVQQVLSQISKPIHLLNITTLSQFRKDAHPSSYNGFKGMDCTHWCIAGLPDTWNQLLYAALIS

A0A1S3AV77 protein trichome birefringence-like 386.6e-3587.34Show/hide
Query:  PINGSTYPGGLPAASMTVQQVLSQISKPIHLLNITTLSQFRKDAHPSSYNGFKGMDCTHWCIAGLPDTWNQLLYAALIS
        PINGSTYPGGLPAAS T+++VLS+++KPIH+LNITTLSQ RKDAHPSSYNGFKGMDCTHWCIAGLPDTWNQLLYA LIS
Subjt:  PINGSTYPGGLPAASMTVQQVLSQISKPIHLLNITTLSQFRKDAHPSSYNGFKGMDCTHWCIAGLPDTWNQLLYAALIS

A0A5D3E4T7 Protein trichome birefringence-like 386.6e-3587.34Show/hide
Query:  PINGSTYPGGLPAASMTVQQVLSQISKPIHLLNITTLSQFRKDAHPSSYNGFKGMDCTHWCIAGLPDTWNQLLYAALIS
        PINGSTYPGGLPAAS T+++VLS+++KPIH+LNITTLSQ RKDAHPSSYNGFKGMDCTHWCIAGLPDTWNQLLYA LIS
Subjt:  PINGSTYPGGLPAASMTVQQVLSQISKPIHLLNITTLSQFRKDAHPSSYNGFKGMDCTHWCIAGLPDTWNQLLYAALIS

A0A5J5B812 PMR5N domain-containing protein2.6e-3181.01Show/hide
Query:  PINGSTYPGGLPAASMTVQQVLSQISKPIHLLNITTLSQFRKDAHPSSYNGFKGMDCTHWCIAGLPDTWNQLLYAALIS
        PI+G TYP GLP A++ V++VL  ISKP++LL+ITTLSQ RKDAHPSSYNGFKGMDCTHWCIAGLPDTWNQLLYAALIS
Subjt:  PINGSTYPGGLPAASMTVQQVLSQISKPIHLLNITTLSQFRKDAHPSSYNGFKGMDCTHWCIAGLPDTWNQLLYAALIS

A0A6J1DUA2 protein trichome birefringence-like 386.6e-3589.87Show/hide
Query:  PINGSTYPGGLPAASMTVQQVLSQISKPIHLLNITTLSQFRKDAHPSSYNGFKGMDCTHWCIAGLPDTWNQLLYAALIS
        P+ GSTYPGGLPAAS TVQQVL++I KPIHLLNITTLSQ RKDAHPSSYNGF+GMDCTHWCIAGLPDTWNQLLYAALIS
Subjt:  PINGSTYPGGLPAASMTVQQVLSQISKPIHLLNITTLSQFRKDAHPSSYNGFKGMDCTHWCIAGLPDTWNQLLYAALIS

SwissProt top hitse value%identityAlignment
F4IWA8 Protein trichome birefringence-like 418.4e-1952.44Show/hide
Query:  PINGSTYPGGLPAASMTVQQVLSQISKPIHLLNITTLSQFRKDAHPSSYNGFKGM----DCTHWCIAGLPDTWNQLLYAALI
        P+ G+ YPGGLPA    +++ L +ISKP+ LL+IT LS  RKDAHPS Y G  G     DC+HWC++G+PDTWN++LY  ++
Subjt:  PINGSTYPGGLPAASMTVQQVLSQISKPIHLLNITTLSQFRKDAHPSSYNGFKGM----DCTHWCIAGLPDTWNQLLYAALI

O22960 Protein trichome birefringence-like 371.6e-2570.51Show/hide
Query:  PINGSTYPGG-LPAASMTVQQVLSQISKPIHLLNITTLSQFRKDAHPSSYNGFKGMDCTHWCIAGLPDTWNQLLYAAL
        P+ GSTYPGG LPAAS+ V +VLS +  P++LL+ITTLSQ RKDAHPS+Y G  G DC+HWC+ GLPDTWNQLLYAAL
Subjt:  PINGSTYPGG-LPAASMTVQQVLSQISKPIHLLNITTLSQFRKDAHPSSYNGFKGMDCTHWCIAGLPDTWNQLLYAAL

Q67XC4 Protein trichome birefringence-like 403.5e-2562.5Show/hide
Query:  PINGSTYPGGLPAASMTVQQVLSQISKPIHLLNITTLSQFRKDAHPSSYNGF-KGMDCTHWCIAGLPDTWNQLLYAALIS
        P  G  YPGGLP   + V +VLS+I KP+HLL++TTLS++RKDAHPS YNG  K +DC+HWC+ GLPDTWN LLY++L S
Subjt:  PINGSTYPGGLPAASMTVQQVLSQISKPIHLLNITTLSQFRKDAHPSSYNGF-KGMDCTHWCIAGLPDTWNQLLYAALIS

Q8VY22 Protein trichome birefringence-like 387.1e-2667.53Show/hide
Query:  PINGSTYPGGLPAASMTVQQVLSQISKPIHLLNITTLSQFRKDAHPSSYNGFKGMDCTHWCIAGLPDTWNQLLYAAL
        P+ GS+YP G P +S  V +VLS + KP+ LL+ITTLSQ RKDAHPSSY G  G DC+HWC+ GLPDTWNQLLYAAL
Subjt:  PINGSTYPGGLPAASMTVQQVLSQISKPIHLLNITTLSQFRKDAHPSSYNGFKGMDCTHWCIAGLPDTWNQLLYAAL

Q9SIN2 Protein trichome birefringence-like 391.2e-2053.75Show/hide
Query:  PINGSTYPGGLPAASMTVQQVLSQISKPIHLLNITTLSQFRKDAHPSSYNG-FKGMDCTHWCIAGLPDTWNQLLYAALIS
        P  G  YPGG P A + + +V+ ++ KP+H L+IT LSQ RKDAHPS+++G   G DC+HWC+ GLPDTWN L Y+ L S
Subjt:  PINGSTYPGGLPAASMTVQQVLSQISKPIHLLNITTLSQFRKDAHPSSYNG-FKGMDCTHWCIAGLPDTWNQLLYAALIS

Arabidopsis top hitse value%identityAlignment
AT1G29050.1 TRICHOME BIREFRINGENCE-LIKE 385.0e-2767.53Show/hide
Query:  PINGSTYPGGLPAASMTVQQVLSQISKPIHLLNITTLSQFRKDAHPSSYNGFKGMDCTHWCIAGLPDTWNQLLYAAL
        P+ GS+YP G P +S  V +VLS + KP+ LL+ITTLSQ RKDAHPSSY G  G DC+HWC+ GLPDTWNQLLYAAL
Subjt:  PINGSTYPGGLPAASMTVQQVLSQISKPIHLLNITTLSQFRKDAHPSSYNGFKGMDCTHWCIAGLPDTWNQLLYAAL

AT2G31110.1 Plant protein of unknown function (DUF828)2.5e-2662.5Show/hide
Query:  PINGSTYPGGLPAASMTVQQVLSQISKPIHLLNITTLSQFRKDAHPSSYNGF-KGMDCTHWCIAGLPDTWNQLLYAALIS
        P  G  YPGGLP   + V +VLS+I KP+HLL++TTLS++RKDAHPS YNG  K +DC+HWC+ GLPDTWN LLY++L S
Subjt:  PINGSTYPGGLPAASMTVQQVLSQISKPIHLLNITTLSQFRKDAHPSSYNGF-KGMDCTHWCIAGLPDTWNQLLYAALIS

AT2G31110.2 Plant protein of unknown function (DUF828)2.5e-2662.5Show/hide
Query:  PINGSTYPGGLPAASMTVQQVLSQISKPIHLLNITTLSQFRKDAHPSSYNGF-KGMDCTHWCIAGLPDTWNQLLYAALIS
        P  G  YPGGLP   + V +VLS+I KP+HLL++TTLS++RKDAHPS YNG  K +DC+HWC+ GLPDTWN LLY++L S
Subjt:  PINGSTYPGGLPAASMTVQQVLSQISKPIHLLNITTLSQFRKDAHPSSYNGF-KGMDCTHWCIAGLPDTWNQLLYAALIS

AT2G34070.1 TRICHOME BIREFRINGENCE-LIKE 371.1e-2670.51Show/hide
Query:  PINGSTYPGG-LPAASMTVQQVLSQISKPIHLLNITTLSQFRKDAHPSSYNGFKGMDCTHWCIAGLPDTWNQLLYAAL
        P+ GSTYPGG LPAAS+ V +VLS +  P++LL+ITTLSQ RKDAHPS+Y G  G DC+HWC+ GLPDTWNQLLYAAL
Subjt:  PINGSTYPGG-LPAASMTVQQVLSQISKPIHLLNITTLSQFRKDAHPSSYNGFKGMDCTHWCIAGLPDTWNQLLYAAL

AT2G42570.1 TRICHOME BIREFRINGENCE-LIKE 398.3e-2253.75Show/hide
Query:  PINGSTYPGGLPAASMTVQQVLSQISKPIHLLNITTLSQFRKDAHPSSYNG-FKGMDCTHWCIAGLPDTWNQLLYAALIS
        P  G  YPGG P A + + +V+ ++ KP+H L+IT LSQ RKDAHPS+++G   G DC+HWC+ GLPDTWN L Y+ L S
Subjt:  PINGSTYPGGLPAASMTVQQVLSQISKPIHLLNITTLSQFRKDAHPSSYNG-FKGMDCTHWCIAGLPDTWNQLLYAALIS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCAATAAATGGATCAACATATCCAGGTGGTTTGCCAGCAGCATCAATGACAGTCCAACAAGTATTGAGTCAAATTTCAAAGCCAATTCATCTGCTTAACATAACAAC
ACTTTCTCAATTTAGAAAAGATGCACATCCAAGCTCCTACAATGGCTTCAAAGGAATGGATTGCACTCATTGGTGCATTGCTGGCCTTCCTGATACCTGGAATCAACTTC
TTTATGCAGCTCTCATTTCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGCCAATAAATGGATCAACATATCCAGGTGGTTTGCCAGCAGCATCAATGACAGTCCAACAAGTATTGAGTCAAATTTCAAAGCCAATTCATCTGCTTAACATAACAAC
ACTTTCTCAATTTAGAAAAGATGCACATCCAAGCTCCTACAATGGCTTCAAAGGAATGGATTGCACTCATTGGTGCATTGCTGGCCTTCCTGATACCTGGAATCAACTTC
TTTATGCAGCTCTCATTTCTTAA
Protein sequenceShow/hide protein sequence
MPINGSTYPGGLPAASMTVQQVLSQISKPIHLLNITTLSQFRKDAHPSSYNGFKGMDCTHWCIAGLPDTWNQLLYAALIS