; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi09G008330 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi09G008330
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionrRNA-processing protein UTP23 homolog
Genome locationchr09:9557370..9562688
RNA-Seq ExpressionLsi09G008330
SyntenyLsi09G008330
Gene Ontology termsGO:0006364 - rRNA processing (biological process)
GO:0009793 - embryo development ending in seed dormancy (biological process)
GO:0005730 - nucleolus (cellular component)
GO:0032040 - small-subunit processome (cellular component)
InterPro domainsIPR006984 - rRNA-processing protein Fcf1/Utp23
IPR029060 - PIN-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004143766.1 rRNA-processing protein UTP23 homolog isoform X1 [Cucumis sativus]6.5e-12188.89Show/hide
Query:  MGIKKQKRQRRAVRFYTTCCGFRPPFKIFCDGTFVHHLLSNQIMPADDAIAKTVGDRVKLFTTRCVRLELRALGQSYTGAFDAANQLFTARCNHEKRKSA
        M IKKQKRQRRAVRFYTTCCGFRPPFKIFCDGTFV+HLLSNQIMPAD+A+AKTVGDRVKLFTTRCV LEL+ALGQSY+GAF+AA+QLFTARC+HEKRKSA
Subjt:  MGIKKQKRQRRAVRFYTTCCGFRPPFKIFCDGTFVHHLLSNQIMPADDAIAKTVGDRVKLFTTRCVRLELRALGQSYTGAFDAANQLFTARCNHEKRKSA

Query:  EACIIDVIGESNPEHFFVATQDANLRNQLQQIPGVPLIYGLRNALFMEQPSDVQRQFVKSLEEERMHVSEMERSLLKRKMKYEVEAEKTNGDEDLGDQNL
        EACI+DVIGESNPEHFFVATQD NLR QLQQIPGVPLI+GLRNALFMEQPSDVQRQFVKSLEE+RMHVSE+ER LLK+K KY VEAEKTN DEDL DQNL
Subjt:  EACIIDVIGESNPEHFFVATQDANLRNQLQQIPGVPLIYGLRNALFMEQPSDVQRQFVKSLEEERMHVSEMERSLLKRKMKYEVEAEKTNGDEDLGDQNL

Query:  DTQVLKKKKKKKSIPNNLKDRAQFKRNKAKGPNPLSCLKKKVKPSPHPVSEK
        DT VL  KKKKK+IP+NLKDR QFKRNKAKGPNPLSCLKKKVKPSPHPVSEK
Subjt:  DTQVLKKKKKKKSIPNNLKDRAQFKRNKAKGPNPLSCLKKKVKPSPHPVSEK

XP_008465424.1 PREDICTED: rRNA-processing protein UTP23 homolog [Cucumis melo]5.5e-12088.1Show/hide
Query:  MGIKKQKRQRRAVRFYTTCCGFRPPFKIFCDGTFVHHLLSNQIMPADDAIAKTVGDRVKLFTTRCVRLELRALGQSYTGAFDAANQLFTARCNHEKRKSA
        M IKKQKRQRRAVRFYTTCCGFRPPFKIFCDGTFV+HLLSNQIMPAD+A+AKTVGDRVKLFTTRCV LEL+ALGQSY GAF+AA+QLFTARC+HEKRKSA
Subjt:  MGIKKQKRQRRAVRFYTTCCGFRPPFKIFCDGTFVHHLLSNQIMPADDAIAKTVGDRVKLFTTRCVRLELRALGQSYTGAFDAANQLFTARCNHEKRKSA

Query:  EACIIDVIGESNPEHFFVATQDANLRNQLQQIPGVPLIYGLRNALFMEQPSDVQRQFVKSLEEERMHVSEMERSLLKRKMKYEVEAEKTNGDEDLGDQNL
        EACI+DVIGESNPEHFFVATQD NLR QLQQIPGVPLI+GLRN LFMEQPSDVQRQFVKSLEE+RMH+SE ER LLK+KMKY VEAEKTN DEDLGDQNL
Subjt:  EACIIDVIGESNPEHFFVATQDANLRNQLQQIPGVPLIYGLRNALFMEQPSDVQRQFVKSLEEERMHVSEMERSLLKRKMKYEVEAEKTNGDEDLGDQNL

Query:  DTQVLKKKKKKKSIPNNLKDRAQFKRNKAKGPNPLSCLKKKVKPSPHPVSEK
        D QVL   KKKK+I +NLKDR QFKRNKAKGPNPLSCLKKKVKPSPHPVSEK
Subjt:  DTQVLKKKKKKKSIPNNLKDRAQFKRNKAKGPNPLSCLKKKVKPSPHPVSEK

XP_011655276.1 rRNA-processing protein UTP23 homolog isoform X2 [Cucumis sativus]6.5e-12188.89Show/hide
Query:  MGIKKQKRQRRAVRFYTTCCGFRPPFKIFCDGTFVHHLLSNQIMPADDAIAKTVGDRVKLFTTRCVRLELRALGQSYTGAFDAANQLFTARCNHEKRKSA
        M IKKQKRQRRAVRFYTTCCGFRPPFKIFCDGTFV+HLLSNQIMPAD+A+AKTVGDRVKLFTTRCV LEL+ALGQSY+GAF+AA+QLFTARC+HEKRKSA
Subjt:  MGIKKQKRQRRAVRFYTTCCGFRPPFKIFCDGTFVHHLLSNQIMPADDAIAKTVGDRVKLFTTRCVRLELRALGQSYTGAFDAANQLFTARCNHEKRKSA

Query:  EACIIDVIGESNPEHFFVATQDANLRNQLQQIPGVPLIYGLRNALFMEQPSDVQRQFVKSLEEERMHVSEMERSLLKRKMKYEVEAEKTNGDEDLGDQNL
        EACI+DVIGESNPEHFFVATQD NLR QLQQIPGVPLI+GLRNALFMEQPSDVQRQFVKSLEE+RMHVSE+ER LLK+K KY VEAEKTN DEDL DQNL
Subjt:  EACIIDVIGESNPEHFFVATQDANLRNQLQQIPGVPLIYGLRNALFMEQPSDVQRQFVKSLEEERMHVSEMERSLLKRKMKYEVEAEKTNGDEDLGDQNL

Query:  DTQVLKKKKKKKSIPNNLKDRAQFKRNKAKGPNPLSCLKKKVKPSPHPVSEK
        DT VL  KKKKK+IP+NLKDR QFKRNKAKGPNPLSCLKKKVKPSPHPVSEK
Subjt:  DTQVLKKKKKKKSIPNNLKDRAQFKRNKAKGPNPLSCLKKKVKPSPHPVSEK

XP_038906639.1 rRNA-processing protein UTP23 homolog isoform X1 [Benincasa hispida]8.4e-12187.7Show/hide
Query:  MGIKKQKRQRRAVRFYTTCCGFRPPFKIFCDGTFVHHLLSNQIMPADDAIAKTVGDRVKLFTTRCVRLELRALGQSYTGAFDAANQLFTARCNHEKRKSA
        MGIKKQKRQRRAVRFYTTCCGFRPPFKIF DGTFVHHL+SNQIMPADDAIAKTVGD+VKLFT+RCVRLELRALGQSY+  F+AANQLFTARCNH +RKSA
Subjt:  MGIKKQKRQRRAVRFYTTCCGFRPPFKIFCDGTFVHHLLSNQIMPADDAIAKTVGDRVKLFTTRCVRLELRALGQSYTGAFDAANQLFTARCNHEKRKSA

Query:  EACIIDVIGESNPEHFFVATQDANLRNQLQQIPGVPLIYGLRNALFMEQPSDVQRQFVKSLEEERMHVSEMERSLLKRKMKYEVEAEKTNGDEDLGDQNL
        EACI DVIGESNPEHFF+ATQDANLR QL++IPGVPLIYGLRNALFMEQPSDVQRQFVKSLEEERMH+SE ERSLLKRK KYEVE++KTNG ED GDQN 
Subjt:  EACIIDVIGESNPEHFFVATQDANLRNQLQQIPGVPLIYGLRNALFMEQPSDVQRQFVKSLEEERMHVSEMERSLLKRKMKYEVEAEKTNGDEDLGDQNL

Query:  DTQVLKKKKKKKSIPNNLKDRAQFKRNKAKGPNPLSCLKKKVKPSPHPVSEK
        + QV +KKKKKKSIPNN+ DRAQFKRNKAKGPNPLSCLKKKVKPS HPV+EK
Subjt:  DTQVLKKKKKKKSIPNNLKDRAQFKRNKAKGPNPLSCLKKKVKPSPHPVSEK

XP_038906640.1 rRNA-processing protein UTP23 homolog isoform X2 [Benincasa hispida]8.4e-12187.7Show/hide
Query:  MGIKKQKRQRRAVRFYTTCCGFRPPFKIFCDGTFVHHLLSNQIMPADDAIAKTVGDRVKLFTTRCVRLELRALGQSYTGAFDAANQLFTARCNHEKRKSA
        MGIKKQKRQRRAVRFYTTCCGFRPPFKIF DGTFVHHL+SNQIMPADDAIAKTVGD+VKLFT+RCVRLELRALGQSY+  F+AANQLFTARCNH +RKSA
Subjt:  MGIKKQKRQRRAVRFYTTCCGFRPPFKIFCDGTFVHHLLSNQIMPADDAIAKTVGDRVKLFTTRCVRLELRALGQSYTGAFDAANQLFTARCNHEKRKSA

Query:  EACIIDVIGESNPEHFFVATQDANLRNQLQQIPGVPLIYGLRNALFMEQPSDVQRQFVKSLEEERMHVSEMERSLLKRKMKYEVEAEKTNGDEDLGDQNL
        EACI DVIGESNPEHFF+ATQDANLR QL++IPGVPLIYGLRNALFMEQPSDVQRQFVKSLEEERMH+SE ERSLLKRK KYEVE++KTNG ED GDQN 
Subjt:  EACIIDVIGESNPEHFFVATQDANLRNQLQQIPGVPLIYGLRNALFMEQPSDVQRQFVKSLEEERMHVSEMERSLLKRKMKYEVEAEKTNGDEDLGDQNL

Query:  DTQVLKKKKKKKSIPNNLKDRAQFKRNKAKGPNPLSCLKKKVKPSPHPVSEK
        + QV +KKKKKKSIPNN+ DRAQFKRNKAKGPNPLSCLKKKVKPS HPV+EK
Subjt:  DTQVLKKKKKKKSIPNNLKDRAQFKRNKAKGPNPLSCLKKKVKPSPHPVSEK

TrEMBL top hitse value%identityAlignment
A0A0A0KTT8 Uncharacterized protein6.6e-9587.56Show/hide
Query:  MPADDAIAKTVGDRVKLFTTRCVRLELRALGQSYTGAFDAANQLFTARCNHEKRKSAEACIIDVIGESNPEHFFVATQDANLRNQLQQIPGVPLIYGLRN
        MPAD+A+AKTVGDRVKLFTTRCV LEL+ALGQSY+GAF+AA+QLFTARC+HEKRKSAEACI+DVIGESNPEHFFVATQD NLR QLQQIPGVPLI+GLRN
Subjt:  MPADDAIAKTVGDRVKLFTTRCVRLELRALGQSYTGAFDAANQLFTARCNHEKRKSAEACIIDVIGESNPEHFFVATQDANLRNQLQQIPGVPLIYGLRN

Query:  ALFMEQPSDVQRQFVKSLEEERMHVSEMERSLLKRKMKYEVEAEKTNGDEDLGDQNLDTQVLKKKKKKKSIPNNLKDRAQFKRNKAKGPNPLSCLKKKVK
        ALFMEQPSDVQRQFVKSLEE+RMHVSE+ER LLK+K KY VEAEKTN DEDL DQNLDT VL  KKKKK+IP+NLKDR QFKRNKAKGPNPLSCLKKKVK
Subjt:  ALFMEQPSDVQRQFVKSLEEERMHVSEMERSLLKRKMKYEVEAEKTNGDEDLGDQNLDTQVLKKKKKKKSIPNNLKDRAQFKRNKAKGPNPLSCLKKKVK

Query:  PSPHPVSEK
        PSPHPVSEK
Subjt:  PSPHPVSEK

A0A1S3CNY6 rRNA-processing protein UTP23 homolog2.6e-12088.1Show/hide
Query:  MGIKKQKRQRRAVRFYTTCCGFRPPFKIFCDGTFVHHLLSNQIMPADDAIAKTVGDRVKLFTTRCVRLELRALGQSYTGAFDAANQLFTARCNHEKRKSA
        M IKKQKRQRRAVRFYTTCCGFRPPFKIFCDGTFV+HLLSNQIMPAD+A+AKTVGDRVKLFTTRCV LEL+ALGQSY GAF+AA+QLFTARC+HEKRKSA
Subjt:  MGIKKQKRQRRAVRFYTTCCGFRPPFKIFCDGTFVHHLLSNQIMPADDAIAKTVGDRVKLFTTRCVRLELRALGQSYTGAFDAANQLFTARCNHEKRKSA

Query:  EACIIDVIGESNPEHFFVATQDANLRNQLQQIPGVPLIYGLRNALFMEQPSDVQRQFVKSLEEERMHVSEMERSLLKRKMKYEVEAEKTNGDEDLGDQNL
        EACI+DVIGESNPEHFFVATQD NLR QLQQIPGVPLI+GLRN LFMEQPSDVQRQFVKSLEE+RMH+SE ER LLK+KMKY VEAEKTN DEDLGDQNL
Subjt:  EACIIDVIGESNPEHFFVATQDANLRNQLQQIPGVPLIYGLRNALFMEQPSDVQRQFVKSLEEERMHVSEMERSLLKRKMKYEVEAEKTNGDEDLGDQNL

Query:  DTQVLKKKKKKKSIPNNLKDRAQFKRNKAKGPNPLSCLKKKVKPSPHPVSEK
        D QVL   KKKK+I +NLKDR QFKRNKAKGPNPLSCLKKKVKPSPHPVSEK
Subjt:  DTQVLKKKKKKKSIPNNLKDRAQFKRNKAKGPNPLSCLKKKVKPSPHPVSEK

A0A6J1CLD6 rRNA-processing protein UTP23 homolog2.9e-9571.83Show/hide
Query:  MGIKKQKRQRRAVRFYTTCCGFRPPFKIFCDGTFVHHLLSNQIMPADDAIAKTVGDRVKLFTTRCVRLELRALGQSYTGAFDAANQLFTARCNHEKRKSA
        M  K+QKR RR VRFY  C GFR PFK+ CDGTFVHHLLSN+I+PAD+A+AKT+G  +KLFTTRCV  EL+ALGQSY+ AFDAA++L  ARC+HE+RKSA
Subjt:  MGIKKQKRQRRAVRFYTTCCGFRPPFKIFCDGTFVHHLLSNQIMPADDAIAKTVGDRVKLFTTRCVRLELRALGQSYTGAFDAANQLFTARCNHEKRKSA

Query:  EACIIDVIGESNPEHFFVATQDANLRNQLQQIPGVPLIYGLRNALFMEQPSDVQRQFVKSLEEERMHVSEMERSLLKRKMKYEVEAEKTNGDEDLGDQNL
        EACI DVIGESN EHFFVATQD +LR +LQ+IPGVPL+YGLRNALFMEQPS +QRQFVKS EEER+H+SE+ER LLK K KY VE E+TN D  LGDQNL
Subjt:  EACIIDVIGESNPEHFFVATQDANLRNQLQQIPGVPLIYGLRNALFMEQPSDVQRQFVKSLEEERMHVSEMERSLLKRKMKYEVEAEKTNGDEDLGDQNL

Query:  DTQVLKKKKKKKSIPNNLKDRAQFKRNKAKGPNPLSCLKKKVKPSPHPVSEK
        +TQ +    KK+S  N LKD+ QFKR KAKGPNPLSC KKK  PS HPVSEK
Subjt:  DTQVLKKKKKKKSIPNNLKDRAQFKRNKAKGPNPLSCLKKKVKPSPHPVSEK

A0A6J1JRB3 rRNA-processing protein UTP23 homolog isoform X27.8e-8868.24Show/hide
Query:  MGIKKQKRQRRAVRFYTTCCGFRPPFKIFCDGTFVHHLLSNQIMPADDAIAKTVGDRVKLFTTRCVRLELRALGQSYTGAFDAANQLFTARCNHEKRKSA
        M  KKQKR R+AVRFYTTC GFR PFK+ CDGTFVHHLLSNQI+PAD A+AK +G RVK+FTTRCV LEL+ALG SY+ AF+AA+ L TARC+HE RK A
Subjt:  MGIKKQKRQRRAVRFYTTCCGFRPPFKIFCDGTFVHHLLSNQIMPADDAIAKTVGDRVKLFTTRCVRLELRALGQSYTGAFDAANQLFTARCNHEKRKSA

Query:  EACIIDVIGESNPEHFFVATQDANLRNQLQQIPGVPLIYGLRNALFMEQPSDVQRQFVKSLEEERMHVSEMERSLLKRKMK-YEVEAEKTNGDEDLGDQN
          CI++VIG+SN EHFFVATQD +L+ QLQ+IPGVPLI+GLRNALFMEQP+ ++RQFVKS EE+R H+SE+E +LL++  K  E E E TN D DL  +N
Subjt:  EACIIDVIGESNPEHFFVATQDANLRNQLQQIPGVPLIYGLRNALFMEQPSDVQRQFVKSLEEERMHVSEMERSLLKRKMK-YEVEAEKTNGDEDLGDQN

Query:  LDTQVLKKKKKKKSIPNNLKDRAQFKRNKAKGPNPLSCL--KKKVKPSPHPVSEK
         + QVL+KKKKK+   N+LKDR QFKR K KGPNPLSCL  KKKV P+ HPVSEK
Subjt:  LDTQVLKKKKKKKSIPNNLKDRAQFKRNKAKGPNPLSCL--KKKVKPSPHPVSEK

A0A6J1JT87 rRNA-processing protein UTP23 homolog isoform X17.8e-8868.24Show/hide
Query:  MGIKKQKRQRRAVRFYTTCCGFRPPFKIFCDGTFVHHLLSNQIMPADDAIAKTVGDRVKLFTTRCVRLELRALGQSYTGAFDAANQLFTARCNHEKRKSA
        M  KKQKR R+AVRFYTTC GFR PFK+ CDGTFVHHLLSNQI+PAD A+AK +G RVK+FTTRCV LEL+ALG SY+ AF+AA+ L TARC+HE RK A
Subjt:  MGIKKQKRQRRAVRFYTTCCGFRPPFKIFCDGTFVHHLLSNQIMPADDAIAKTVGDRVKLFTTRCVRLELRALGQSYTGAFDAANQLFTARCNHEKRKSA

Query:  EACIIDVIGESNPEHFFVATQDANLRNQLQQIPGVPLIYGLRNALFMEQPSDVQRQFVKSLEEERMHVSEMERSLLKRKMK-YEVEAEKTNGDEDLGDQN
          CI++VIG+SN EHFFVATQD +L+ QLQ+IPGVPLI+GLRNALFMEQP+ ++RQFVKS EE+R H+SE+E +LL++  K  E E E TN D DL  +N
Subjt:  EACIIDVIGESNPEHFFVATQDANLRNQLQQIPGVPLIYGLRNALFMEQPSDVQRQFVKSLEEERMHVSEMERSLLKRKMK-YEVEAEKTNGDEDLGDQN

Query:  LDTQVLKKKKKKKSIPNNLKDRAQFKRNKAKGPNPLSCL--KKKVKPSPHPVSEK
         + QVL+KKKKK+   N+LKDR QFKR K KGPNPLSCL  KKKV P+ HPVSEK
Subjt:  LDTQVLKKKKKKKSIPNNLKDRAQFKRNKAKGPNPLSCL--KKKVKPSPHPVSEK

SwissProt top hitse value%identityAlignment
O74862 rRNA-processing protein utp236.5e-1529.63Show/hide
Query:  KKQKRQRRAVRFYTTCCGFRPPFKIFCDGTFVHHLLSNQIMPADDAIAKTVGDRVKLFTTRCVRLELRALGQSYTGAFDAANQLFTARCNH-EKRKSAEA
        K+ K  R+ +  Y    GFR P+++  D  F+   LS Q +    A+A+TV   +K   T+C   +L +           A      RC H ++  S   
Subjt:  KKQKRQRRAVRFYTTCCGFRPPFKIFCDGTFVHHLLSNQIMPADDAIAKTVGDRVKLFTTRCVRLELRALGQSYTGAFDAANQLFTARCNH-EKRKSAEA

Query:  CIIDV--IGESNPEHFFVATQDANLRNQLQQIPGVPLIYGLRNALFMEQPSDVQRQFVKSLEEERMHVSEMERSLLKRKMKYEVEAEKTNGDEDLGDQNL
        CI  V  I   N   + VATQD  LR  L+ +PGVPLIY  R+ + +E  S        + E  +M +S+ E+ LL  K +            +L   + 
Subjt:  CIIDV--IGESNPEHFFVATQDANLRNQLQQIPGVPLIYGLRNALFMEQPSDVQRQFVKSLEEERMHVSEMERSLLKRKMKYEVEAEKTNGDEDLGDQNL

Query:  DTQVLKKKKKKKSIPNNLKDRAQFKRNKAKGPNPLSCLKKKVK
        DT    K+    +   +   +A  KR   KGPNPLS  K+  K
Subjt:  DTQVLKKKKKKKSIPNNLKDRAQFKRNKAKGPNPLSCLKKKVK

Q08DU1 rRNA-processing protein UTP23 homolog1.2e-2430.74Show/hide
Query:  MGIKKQKRQRRAVRFYTTCCGFRPPFKIFCDGTFVHHLLSNQIMPADDAIAKTVGDRVKLFTTRCVRLELRALGQSYTGAFDAANQLFTARCNHEKRK-S
        M I +QK  ++ + F+    G R P++I  DGTF    L  +I    + + + +    +L TTRCV  EL  LG+   GA   A +     C H K   S
Subjt:  MGIKKQKRQRRAVRFYTTCCGFRPPFKIFCDGTFVHHLLSNQIMPADDAIAKTVGDRVKLFTTRCVRLELRALGQSYTGAFDAANQLFTARCNHEKRK-S

Query:  AEACIIDVIGESNPEHFFVATQDANLRNQLQQIPGVPLIYGLRNALFMEQPSDVQRQFVKSLEEERMHVSEMERSLLKRKMKYEVEAEKTNGDEDLGDQN
           C++ ++ + NP H+F+ATQD NL  ++++ PG+PL++ ++N + +++PS     FVK++E  ++ VS  E+                          
Subjt:  AEACIIDVIGESNPEHFFVATQDANLRNQLQQIPGVPLIYGLRNALFMEQPSDVQRQFVKSLEEERMHVSEMERSLLKRKMKYEVEAEKTNGDEDLGDQN

Query:  LDTQVLKKKKKKKSIPNNLKDRAQFKRNKAKGPNPLSCLKKKVK
           Q +++ K+++ +  + + R + KR K  GPNPLSCLKKK K
Subjt:  LDTQVLKKKKKKKSIPNNLKDRAQFKRNKAKGPNPLSCLKKKVK

Q12339 rRNA-processing protein UTP236.1e-1328.33Show/hide
Query:  KKQKRQRRAVRFYTTCCGFRPPFKIFCDGTFVHHLLSNQIMPADDAIAKTVGDRVKLFTTRCVRLELRALGQSYT-GAFDAANQLFTARCNHEKR--KSA
        K+ K  R+ +  Y+    FR P+++  D   V    +N        + +T+   VK+  T+C    ++AL ++   GA + A Q    RCNH  +  KS 
Subjt:  KKQKRQRRAVRFYTTCCGFRPPFKIFCDGTFVHHLLSNQIMPADDAIAKTVGDRVKLFTTRCVRLELRALGQSYT-GAFDAANQLFTARCNHEKR--KSA

Query:  EACIIDVIGES--NPEHFFVATQDANLRNQLQQIPGVPLIYGLRNALFMEQPSDVQRQFVKSLEEERMHVSEMERSLLKRKMKYEVEA-EKTNGDEDLGD
          CI  V+  S  N   + VA+QD +LR +L+ +PGVPLI+  R+ + ME  S    +  K  EE++++    + ++ K +   +    E       LG 
Subjt:  EACIIDVIGES--NPEHFFVATQDANLRNQLQQIPGVPLIYGLRNALFMEQPSDVQRQFVKSLEEERMHVSEMERSLLKRKMKYEVEA-EKTNGDEDLGD

Query:  QNLDTQVLKKKKKKKSIPNNLKDRAQFKRNKAK
        +  +   +KKKKK  S  + +KD+    + K K
Subjt:  QNLDTQVLKKKKKKKSIPNNLKDRAQFKRNKAK

Q9BRU9 rRNA-processing protein UTP23 homolog1.4e-2532.38Show/hide
Query:  MGIKKQKRQRRAVRFYTTCCGFRPPFKIFCDGTFVHHLLSNQIMPADDAIAKTVGDRVKLFTTRCVRLELRALGQSYTGAFDAANQLFTARCNHEKRK-S
        M I +QK  ++ + F+    G R P++I  DGTF    L  +I   +      +G+  +L TTRCV  EL  LG+   GA   A +     C H K   S
Subjt:  MGIKKQKRQRRAVRFYTTCCGFRPPFKIFCDGTFVHHLLSNQIMPADDAIAKTVGDRVKLFTTRCVRLELRALGQSYTGAFDAANQLFTARCNHEKRK-S

Query:  AEACIIDVIGESNPEHFFVATQDANLRNQLQQIPGVPLIYGLRNALFMEQPSDVQRQFVKSLEEERMHVSEMERSLLKRKMKYEVEAEKTNGDEDLGDQN
           C++ ++ E NP H+FVATQD NL  ++++ PGVPL++ ++N + +++PS     FVK++E  ++ VS  E+                          
Subjt:  AEACIIDVIGESNPEHFFVATQDANLRNQLQQIPGVPLIYGLRNALFMEQPSDVQRQFVKSLEEERMHVSEMERSLLKRKMKYEVEAEKTNGDEDLGDQN

Query:  LDTQVLKKKKKKKSIPNNLKDRAQFKRNKAKGPNPLSCLKKKVK
           + +K  K+++ +  N +   + KR K  GPNPLSCLKKK K
Subjt:  LDTQVLKKKKKKKSIPNNLKDRAQFKRNKAKGPNPLSCLKKKVK

Q9CX11 rRNA-processing protein UTP23 homolog2.4e-2532.55Show/hide
Query:  MGIKKQKRQRRAVRFYTTCCGFRPPFKIFCDGTFVHHLLSNQIMPADDAIAKTVGDRVKLFTTRCVRLELRALGQSYTGAFDAANQLFTARCNHEKRK-S
        M I +QK  ++ + F+    G R P++I  DGTF    L  +I   D      +G+  +L TTRCV  EL  LG+   GA   A +     C H K   S
Subjt:  MGIKKQKRQRRAVRFYTTCCGFRPPFKIFCDGTFVHHLLSNQIMPADDAIAKTVGDRVKLFTTRCVRLELRALGQSYTGAFDAANQLFTARCNHEKRK-S

Query:  AEACIIDVIGESNPEHFFVATQDANLRNQLQQIPGVPLIYGLRNALFMEQPSDVQRQFVKSLEEERMHVSEMERSLLKRKMKYEVEAEKTNGDEDLGDQN
           C++ ++ E NP H+FVATQD NL  ++++ PG+PL++ ++N + +++PS     FVK++E  ++ VS  E+  +K                      
Subjt:  AEACIIDVIGESNPEHFFVATQDANLRNQLQQIPGVPLIYGLRNALFMEQPSDVQRQFVKSLEEERMHVSEMERSLLKRKMKYEVEAEKTNGDEDLGDQN

Query:  LDTQVLKKKKKKKSIPNNLKDRAQFKRNKAKGPNPLSCLKKKVK--PSPHPVSEK
              + K+++  + N    R + K+ K  GPNPLSCLKKK K   +  P SEK
Subjt:  LDTQVLKKKKKKKSIPNNLKDRAQFKRNKAKGPNPLSCLKKKVK--PSPHPVSEK

Arabidopsis top hitse value%identityAlignment
AT2G34570.1 PIN domain-like family protein1.2e-5948.05Show/hide
Query:  MGIKKQKRQRRAVRFYTTCCGFRPPFKIFCDGTFVHHLLSNQIMPADDAIAKTVGDRVKLFTTRCVRLELRALGQSYTGAFDAANQLFTARCNHEKRKSA
        M +K+QK+ RR VRF+T C GFR P+K+ CDGTFVHHL++N+I PAD A+++ +G  VKLFTTRCV  EL  LG+ +  + +AA  L TA C HE+ K+A
Subjt:  MGIKKQKRQRRAVRFYTTCCGFRPPFKIFCDGTFVHHLLSNQIMPADDAIAKTVGDRVKLFTTRCVRLELRALGQSYTGAFDAANQLFTARCNHEKRKSA

Query:  EACIIDVIGESNPEHFFVATQDANLRNQLQQIPGVPLIYGLRNALFMEQPSDVQRQFVKSLEEERMHVSEMERSLLKRKMKYEVEA---EKTNGDEDLGD
        + C+ +VIG  N EHFF+ TQDA  R +LQQ   VPL++GLRN L ++QPSD QRQ  K  E +R+ +++ E+ LL ++    + +   E T  +E+ G 
Subjt:  EACIIDVIGESNPEHFFVATQDANLRNQLQQIPGVPLIYGLRNALFMEQPSDVQRQFVKSLEEERMHVSEMERSLLKRKMKYEVEA---EKTNGDEDLGD

Query:  QNLDTQVLKKKKKKKSIPNNL--KDRAQFKRNKAKGPNPLSCLKKKVKPSPHPVSE
                    +  S  N L  KDR QFKRN+AKGPNPLSC+KKK K +P   S+
Subjt:  QNLDTQVLKKKKKKKSIPNNL--KDRAQFKRNKAKGPNPLSCLKKKVKPSPHPVSE

AT2G46230.1 PIN domain-like family protein1.6e-0830.51Show/hide
Query:  PPFKIFCDGTFVHHLLSNQIMPADDAIAKTVGDRVKLFTTRCVRLELRALGQSYTGAFDAANQLFTAR--CNHEKRKSAEACIIDVIGESNPEHFFVATQ
        PP+++  D  F++  + N+I   +  +   +        T CV  EL  LGQ Y  A   A      R  C H K   A+ C++D +  +  + F VAT 
Subjt:  PPFKIFCDGTFVHHLLSNQIMPADDAIAKTVGDRVKLFTTRCVRLELRALGQSYTGAFDAANQLFTAR--CNHEKRKSAEACIIDVIGESNPEHFFVATQ

Query:  DANLRNQLQQIPGVPLIY
        D +L+ ++++IPGVP++Y
Subjt:  DANLRNQLQQIPGVPLIY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAATCAAAAAACAAAAGCGTCAACGGAGAGCCGTGAGATTCTACACTACATGTTGTGGATTTAGGCCACCATTTAAAATCTTTTGTGATGGAACTTTTGTGCACCA
TCTTCTCTCCAATCAGATAATGCCGGCTGATGATGCCATTGCTAAAACTGTTGGAGACAGAGTAAAGCTTTTCACCACCAGATGTGTACGCTTAGAGTTGAGAGCTCTTG
GCCAATCTTACACTGGAGCTTTTGACGCAGCTAATCAGCTGTTCACTGCGAGATGCAACCATGAAAAAAGAAAGAGTGCTGAGGCATGCATCATTGATGTGATTGGTGAA
TCAAATCCTGAGCATTTCTTTGTTGCCACTCAAGATGCTAATCTTAGGAATCAGCTTCAACAGATACCTGGGGTCCCACTCATATATGGTTTGAGAAATGCACTTTTCAT
GGAGCAACCATCTGACGTGCAGCGACAGTTTGTTAAGTCTTTAGAAGAAGAAAGAATGCACGTGTCTGAGATGGAACGTAGTTTATTGAAGAGAAAAATGAAGTATGAAG
TGGAAGCTGAGAAAACTAATGGAGATGAAGATTTGGGAGATCAAAATTTAGACACACAAGTTTTGAAAAAGAAAAAGAAAAAGAAAAGCATTCCAAATAATTTGAAAGAC
AGGGCTCAATTTAAGAGAAACAAAGCAAAGGGTCCAAATCCTCTTTCATGTTTGAAGAAAAAGGTCAAACCAAGCCCACATCCAGTTTCAGAGAAGGTAGTTTTCCATCT
TCTGTCATTTTCCTTGTCAGTCCTTCTGATTGCCTAA
mRNA sequenceShow/hide mRNA sequence
ATTCTCTCCGTCTCTCGCGTCTTTCCCTCTCTCTCACTCTACAGCCCCGCCGCCAGCGTCAGCCCCCACCACCGGCCGCCGCAACTGCCGTCTCTGACCAACGAGCGACG
TCGCAGTGCGTTGTCCGCCGCCGGTCGTCGTCGCCGAGAGCCACCACACTGAACGGGGAATCCGTTTCTCTCTTTCTCCAACAGCCACCACAGCACCAGGGCCACTGACA
ATCTGCGACGCCGTCGACTACCGTTCCTTGCCGTCCTTCATGCCGCACAGTGCCGCCGGTTTCGTTTCATTTAGTGGGTAAGGTGGTCGATTGATTTTGGGTTCTTTTTG
GCTGGATGTTAGTTACCCATTGAAGTTTGAAGGGATCGAAGCCGCTTTCCAGCTGAATCAAGAGCTTTTTGGCGCGTTCTTGATTAAGCTTCAATTTTGGGATTTTTATT
CAAGTTTTCTCTACACCGGAAGAGAGATTATCTCTTCGCGATTAATTGAAGTTCAATTTCAAAAAATACAGCGGTTCAGCCTTAACTCGCGCCGTTGGTGATCGCTCCGC
TGCCGCTAATTTATCAAATCCCAAGATGGGAATCAAAAAACAAAAGCGTCAACGGAGAGCCGTGAGATTCTACACTACATGTTGTGGATTTAGGCCACCATTTAAAATCT
TTTGTGATGGAACTTTTGTGCACCATCTTCTCTCCAATCAGATAATGCCGGCTGATGATGCCATTGCTAAAACTGTTGGAGACAGAGTAAAGCTTTTCACCACCAGATGT
GTACGCTTAGAGTTGAGAGCTCTTGGCCAATCTTACACTGGAGCTTTTGACGCAGCTAATCAGCTGTTCACTGCGAGATGCAACCATGAAAAAAGAAAGAGTGCTGAGGC
ATGCATCATTGATGTGATTGGTGAATCAAATCCTGAGCATTTCTTTGTTGCCACTCAAGATGCTAATCTTAGGAATCAGCTTCAACAGATACCTGGGGTCCCACTCATAT
ATGGTTTGAGAAATGCACTTTTCATGGAGCAACCATCTGACGTGCAGCGACAGTTTGTTAAGTCTTTAGAAGAAGAAAGAATGCACGTGTCTGAGATGGAACGTAGTTTA
TTGAAGAGAAAAATGAAGTATGAAGTGGAAGCTGAGAAAACTAATGGAGATGAAGATTTGGGAGATCAAAATTTAGACACACAAGTTTTGAAAAAGAAAAAGAAAAAGAA
AAGCATTCCAAATAATTTGAAAGACAGGGCTCAATTTAAGAGAAACAAAGCAAAGGGTCCAAATCCTCTTTCATGTTTGAAGAAAAAGGTCAAACCAAGCCCACATCCAG
TTTCAGAGAAGGTAGTTTTCCATCTTCTGTCATTTTCCTTGTCAGTCCTTCTGATTGCCTAA
Protein sequenceShow/hide protein sequence
MGIKKQKRQRRAVRFYTTCCGFRPPFKIFCDGTFVHHLLSNQIMPADDAIAKTVGDRVKLFTTRCVRLELRALGQSYTGAFDAANQLFTARCNHEKRKSAEACIIDVIGE
SNPEHFFVATQDANLRNQLQQIPGVPLIYGLRNALFMEQPSDVQRQFVKSLEEERMHVSEMERSLLKRKMKYEVEAEKTNGDEDLGDQNLDTQVLKKKKKKKSIPNNLKD
RAQFKRNKAKGPNPLSCLKKKVKPSPHPVSEKVVFHLLSFSLSVLLIA