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Lsi09G008530 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi09G008530
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptioncalumenin-like
Genome locationchr09:9829800..9832713
RNA-Seq ExpressionLsi09G008530
SyntenyLsi09G008530
Gene Ontology termsGO:0005783 - endoplasmic reticulum (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8637521.1 hypothetical protein CSA_004542 [Cucumis sativus]3.4e-6697.69Show/hide
Query:  ERDSDKDGKINFNEFFHGLFDMVRNYDENHNSSHHSEDSRDGPARNLFAVLDKDNDGHLSDEELLPIIEKIHPSEHYYAKQQAEYIIQQADADKDGRLTL
        ERDSDKDGKINFNEFFHGLFDMVRNYDENHNSSHHSEDSRDGPARNLFAVLDKDNDGHLS+EELLPII KIHPSEHYYAKQQAEYIIQQADADKDGRLTL
Subjt:  ERDSDKDGKINFNEFFHGLFDMVRNYDENHNSSHHSEDSRDGPARNLFAVLDKDNDGHLSDEELLPIIEKIHPSEHYYAKQQAEYIIQQADADKDGRLTL

Query:  TEMIDHPYVFYSAIFNEDDEDDYDFHDEFR
         EMIDHPYVFYSAIFNEDDEDDYDFHDEFR
Subjt:  TEMIDHPYVFYSAIFNEDDEDDYDFHDEFR

KAE8648373.1 hypothetical protein Csa_023160 [Cucumis sativus]3.4e-6697.69Show/hide
Query:  ERDSDKDGKINFNEFFHGLFDMVRNYDENHNSSHHSEDSRDGPARNLFAVLDKDNDGHLSDEELLPIIEKIHPSEHYYAKQQAEYIIQQADADKDGRLTL
        ERDSDKDGKINFNEFFHGLFDMVRNYDENHNSSHHSEDSRDGPARNLFAVLDKDNDGHLS+EELLPII KIHPSEHYYAKQQAEYIIQQADADKDGRLTL
Subjt:  ERDSDKDGKINFNEFFHGLFDMVRNYDENHNSSHHSEDSRDGPARNLFAVLDKDNDGHLSDEELLPIIEKIHPSEHYYAKQQAEYIIQQADADKDGRLTL

Query:  TEMIDHPYVFYSAIFNEDDEDDYDFHDEFR
         EMIDHPYVFYSAIFNEDDEDDYDFHDEFR
Subjt:  TEMIDHPYVFYSAIFNEDDEDDYDFHDEFR

XP_008465196.1 PREDICTED: calumenin-B-like [Cucumis melo]9.0e-6798.46Show/hide
Query:  ERDSDKDGKINFNEFFHGLFDMVRNYDENHNSSHHSEDSRDGPARNLFAVLDKDNDGHLSDEELLPIIEKIHPSEHYYAKQQAEYIIQQADADKDGRLTL
        ERDSDKDGKINFNEFFHGLFDMVRNYDENHNSSHHSEDSRDGPARNLFAVLDKDNDGHLS+EELLPII KIHPSEHYYAKQQAEYIIQQADADKDGRLTL
Subjt:  ERDSDKDGKINFNEFFHGLFDMVRNYDENHNSSHHSEDSRDGPARNLFAVLDKDNDGHLSDEELLPIIEKIHPSEHYYAKQQAEYIIQQADADKDGRLTL

Query:  TEMIDHPYVFYSAIFNEDDEDDYDFHDEFR
        TEMIDHPYVFYSAIFNEDDEDDYDFHDEFR
Subjt:  TEMIDHPYVFYSAIFNEDDEDDYDFHDEFR

XP_022939873.1 calumenin-like [Cucurbita moschata]5.8e-6697.69Show/hide
Query:  ERDSDKDGKINFNEFFHGLFDMVRNYDENHNSSHHSEDSRDGPARNLFAVLDKDNDGHLSDEELLPIIEKIHPSEHYYAKQQAEYIIQQADADKDGRLTL
        ERDSDKDGKINFNEFFHGLFDMVRNYDENHNSSHHSEDSRDGPARNLFAVLDKDNDGHLSDEELLPII KIHPSEHYYA+QQAEYIIQQADADKDGRLTL
Subjt:  ERDSDKDGKINFNEFFHGLFDMVRNYDENHNSSHHSEDSRDGPARNLFAVLDKDNDGHLSDEELLPIIEKIHPSEHYYAKQQAEYIIQQADADKDGRLTL

Query:  TEMIDHPYVFYSAIFNEDDEDDYDFHDEFR
        TEMIDHPYVFYSAIFNEDDEDDYD HDEFR
Subjt:  TEMIDHPYVFYSAIFNEDDEDDYDFHDEFR

XP_031742276.1 LOW QUALITY PROTEIN: calumenin-B [Cucumis sativus]3.4e-6697.69Show/hide
Query:  ERDSDKDGKINFNEFFHGLFDMVRNYDENHNSSHHSEDSRDGPARNLFAVLDKDNDGHLSDEELLPIIEKIHPSEHYYAKQQAEYIIQQADADKDGRLTL
        ERDSDKDGKINFNEFFHGLFDMVRNYDENHNSSHHSEDSRDGPARNLFAVLDKDNDGHLS+EELLPII KIHPSEHYYAKQQAEYIIQQADADKDGRLTL
Subjt:  ERDSDKDGKINFNEFFHGLFDMVRNYDENHNSSHHSEDSRDGPARNLFAVLDKDNDGHLSDEELLPIIEKIHPSEHYYAKQQAEYIIQQADADKDGRLTL

Query:  TEMIDHPYVFYSAIFNEDDEDDYDFHDEFR
         EMIDHPYVFYSAIFNEDDEDDYDFHDEFR
Subjt:  TEMIDHPYVFYSAIFNEDDEDDYDFHDEFR

TrEMBL top hitse value%identityAlignment
A0A1S3CNB9 calumenin-B-like4.3e-6798.46Show/hide
Query:  ERDSDKDGKINFNEFFHGLFDMVRNYDENHNSSHHSEDSRDGPARNLFAVLDKDNDGHLSDEELLPIIEKIHPSEHYYAKQQAEYIIQQADADKDGRLTL
        ERDSDKDGKINFNEFFHGLFDMVRNYDENHNSSHHSEDSRDGPARNLFAVLDKDNDGHLS+EELLPII KIHPSEHYYAKQQAEYIIQQADADKDGRLTL
Subjt:  ERDSDKDGKINFNEFFHGLFDMVRNYDENHNSSHHSEDSRDGPARNLFAVLDKDNDGHLSDEELLPIIEKIHPSEHYYAKQQAEYIIQQADADKDGRLTL

Query:  TEMIDHPYVFYSAIFNEDDEDDYDFHDEFR
        TEMIDHPYVFYSAIFNEDDEDDYDFHDEFR
Subjt:  TEMIDHPYVFYSAIFNEDDEDDYDFHDEFR

A0A5D3CVB0 Calumenin-B-like4.3e-6798.46Show/hide
Query:  ERDSDKDGKINFNEFFHGLFDMVRNYDENHNSSHHSEDSRDGPARNLFAVLDKDNDGHLSDEELLPIIEKIHPSEHYYAKQQAEYIIQQADADKDGRLTL
        ERDSDKDGKINFNEFFHGLFDMVRNYDENHNSSHHSEDSRDGPARNLFAVLDKDNDGHLS+EELLPII KIHPSEHYYAKQQAEYIIQQADADKDGRLTL
Subjt:  ERDSDKDGKINFNEFFHGLFDMVRNYDENHNSSHHSEDSRDGPARNLFAVLDKDNDGHLSDEELLPIIEKIHPSEHYYAKQQAEYIIQQADADKDGRLTL

Query:  TEMIDHPYVFYSAIFNEDDEDDYDFHDEFR
        TEMIDHPYVFYSAIFNEDDEDDYDFHDEFR
Subjt:  TEMIDHPYVFYSAIFNEDDEDDYDFHDEFR

A0A6J1CJ22 calumenin-like1.0e-6393.08Show/hide
Query:  ERDSDKDGKINFNEFFHGLFDMVRNYDENHNSSHHSEDSRDGPARNLFAVLDKDNDGHLSDEELLPIIEKIHPSEHYYAKQQAEYIIQQADADKDGRLTL
        ERDSDKDGKINFNEFFHGLFD+VRNYDENH+SSH S+D RDGPARNLFAVLDKDNDGHLSDEELLPII KIHPSEHYYAKQQAEYI+QQADADKDGRLTL
Subjt:  ERDSDKDGKINFNEFFHGLFDMVRNYDENHNSSHHSEDSRDGPARNLFAVLDKDNDGHLSDEELLPIIEKIHPSEHYYAKQQAEYIIQQADADKDGRLTL

Query:  TEMIDHPYVFYSAIFNEDDEDDYDFHDEFR
         EMIDHPYVFYSAIFNED+EDDYDFHDEFR
Subjt:  TEMIDHPYVFYSAIFNEDDEDDYDFHDEFR

A0A6J1FMS7 calumenin-like2.8e-6697.69Show/hide
Query:  ERDSDKDGKINFNEFFHGLFDMVRNYDENHNSSHHSEDSRDGPARNLFAVLDKDNDGHLSDEELLPIIEKIHPSEHYYAKQQAEYIIQQADADKDGRLTL
        ERDSDKDGKINFNEFFHGLFDMVRNYDENHNSSHHSEDSRDGPARNLFAVLDKDNDGHLSDEELLPII KIHPSEHYYA+QQAEYIIQQADADKDGRLTL
Subjt:  ERDSDKDGKINFNEFFHGLFDMVRNYDENHNSSHHSEDSRDGPARNLFAVLDKDNDGHLSDEELLPIIEKIHPSEHYYAKQQAEYIIQQADADKDGRLTL

Query:  TEMIDHPYVFYSAIFNEDDEDDYDFHDEFR
        TEMIDHPYVFYSAIFNEDDEDDYD HDEFR
Subjt:  TEMIDHPYVFYSAIFNEDDEDDYDFHDEFR

A0A6J1JYP4 calumenin-like5.3e-6596.15Show/hide
Query:  ERDSDKDGKINFNEFFHGLFDMVRNYDENHNSSHHSEDSRDGPARNLFAVLDKDNDGHLSDEELLPIIEKIHPSEHYYAKQQAEYIIQQADADKDGRLTL
        ERDSDKDGKINFNEFFHGLFDMVRNYDENHNSSHHSE+SRDGPARNLFAVLDKDNDGHLSDEELLPII KIHPSE+YYA+QQAEYIIQQADADKDGRLTL
Subjt:  ERDSDKDGKINFNEFFHGLFDMVRNYDENHNSSHHSEDSRDGPARNLFAVLDKDNDGHLSDEELLPIIEKIHPSEHYYAKQQAEYIIQQADADKDGRLTL

Query:  TEMIDHPYVFYSAIFNEDDEDDYDFHDEFR
        TEMIDHPYVFYSAIFNEDDEDDYD HDEFR
Subjt:  TEMIDHPYVFYSAIFNEDDEDDYDFHDEFR

SwissProt top hitse value%identityAlignment
P62166 Neuronal calcium sensor 11.7e-0430.28Show/hide
Query:  DSDKDGKINFNEFFHGLFDMVRNYDENHNSSHHSEDSRDGPARNLFAVLDKDNDGHLSDEELLPIIEKIH---------PSEHYYAKQQAEYIIQQADAD
        D +KDG+I F+EF   L             S  S  + D   R  F + D DNDG+++  E+L I++ I+         P E    +++ + I    D +
Subjt:  DSDKDGKINFNEFFHGLFDMVRNYDENHNSSHHSEDSRDGPARNLFAVLDKDNDGHLSDEELLPIIEKIH---------PSEHYYAKQQAEYIIQQADAD

Query:  KDGRLTLTE
         DG+LTL E
Subjt:  KDGRLTLTE

P62167 Neuronal calcium sensor 11.7e-0430.28Show/hide
Query:  DSDKDGKINFNEFFHGLFDMVRNYDENHNSSHHSEDSRDGPARNLFAVLDKDNDGHLSDEELLPIIEKIH---------PSEHYYAKQQAEYIIQQADAD
        D +KDG+I F+EF   L             S  S  + D   R  F + D DNDG+++  E+L I++ I+         P E    +++ + I    D +
Subjt:  DSDKDGKINFNEFFHGLFDMVRNYDENHNSSHHSEDSRDGPARNLFAVLDKDNDGHLSDEELLPIIEKIH---------PSEHYYAKQQAEYIIQQADAD

Query:  KDGRLTLTE
         DG+LTL E
Subjt:  KDGRLTLTE

Q8BNY6 Neuronal calcium sensor 11.7e-0430.28Show/hide
Query:  DSDKDGKINFNEFFHGLFDMVRNYDENHNSSHHSEDSRDGPARNLFAVLDKDNDGHLSDEELLPIIEKIH---------PSEHYYAKQQAEYIIQQADAD
        D +KDG+I F+EF   L             S  S  + D   R  F + D DNDG+++  E+L I++ I+         P E    +++ + I    D +
Subjt:  DSDKDGKINFNEFFHGLFDMVRNYDENHNSSHHSEDSRDGPARNLFAVLDKDNDGHLSDEELLPIIEKIH---------PSEHYYAKQQAEYIIQQADAD

Query:  KDGRLTLTE
         DG+LTL E
Subjt:  KDGRLTLTE

Q91614 Neuronal calcium sensor 11.3e-0430.28Show/hide
Query:  DSDKDGKINFNEFFHGLFDMVRNYDENHNSSHHSEDSRDGPARNLFAVLDKDNDGHLSDEELLPIIEKIH---------PSEHYYAKQQAEYIIQQADAD
        D +KDG+I F+EF   L             S  S  + D   R  F + D DNDG+++  E+L I++ I+         P E    +++ + I    D +
Subjt:  DSDKDGKINFNEFFHGLFDMVRNYDENHNSSHHSEDSRDGPARNLFAVLDKDNDGHLSDEELLPIIEKIH---------PSEHYYAKQQAEYIIQQADAD

Query:  KDGRLTLTE
         DG+LTL E
Subjt:  KDGRLTLTE

Q9JM83 Calmodulin-42.0e-0531.37Show/hide
Query:  DSDKDGKINFNEFFHGLFDMVRNYDENHNSSHHSEDSRDGPARNLFAVLDKDNDGHLSDEELLPIIEKIHPSEHYYAKQQAEYIIQQADADKDGRLTLTE
        D+D DGKI+F EF       +  Y + H         R G  R +F VLD++ DG+++ +EL   + K+  S    ++++ E +I+ AD D+DG++   E
Subjt:  DSDKDGKINFNEFFHGLFDMVRNYDENHNSSHHSEDSRDGPARNLFAVLDKDNDGHLSDEELLPIIEKIHPSEHYYAKQQAEYIIQQADADKDGRLTLTE

Query:  MI
         +
Subjt:  MI

Arabidopsis top hitse value%identityAlignment
AT4G27790.1 Calcium-binding EF hand family protein4.1e-1737.8Show/hide
Query:  DSDKDGKINFNEFFHGLFDMVRNYDENHNSSHHSEDSRDGPARNLFAVLDKDNDGHLSDEELLPIIEKIHPSEHYYAKQQAEYIIQQADADKDGRLTLTE
        D++ DGK+ + EF    ++M + + +        ED      + LFA +D+D D  L  +EL PI++ + P E  YAK  + ++  +AD DKDG+L+L E
Subjt:  DSDKDGKINFNEFFHGLFDMVRNYDENHNSSHHSEDSRDGPARNLFAVLDKDNDGHLSDEELLPIIEKIHPSEHYYAKQQAEYIIQQADADKDGRLTLTE

Query:  MIDHPYVFYSAIFNED-DEDDYDFHDE
        M+ H  VFY A+ +ED D++DY  HDE
Subjt:  MIDHPYVFYSAIFNED-DEDDYDFHDE

AT4G37010.1 centrin 26.8e-0426.92Show/hide
Query:  ERDSDKDGKINFNEFFHGLFDMVRNYDENHNSSHHSEDSRDGPARNLFAVLDKDNDGHLSDEELLPIIEKIHPSEHYYAKQQAEYIIQQADADKDGRLTL
        E D ++ G I+F+EF H +            +     DS D  ++  F ++D DN+G +S  ++  I +++  +   +     E +I++AD DKDG + L
Subjt:  ERDSDKDGKINFNEFFHGLFDMVRNYDENHNSSHHSEDSRDGPARNLFAVLDKDNDGHLSDEELLPIIEKIHPSEHYYAKQQAEYIIQQADADKDGRLTL

Query:  TEMI
         E +
Subjt:  TEMI

AT4G37010.2 centrin 26.8e-0426.92Show/hide
Query:  ERDSDKDGKINFNEFFHGLFDMVRNYDENHNSSHHSEDSRDGPARNLFAVLDKDNDGHLSDEELLPIIEKIHPSEHYYAKQQAEYIIQQADADKDGRLTL
        E D ++ G I+F+EF H +            +     DS D  ++  F ++D DN+G +S  ++  I +++  +   +     E +I++AD DKDG + L
Subjt:  ERDSDKDGKINFNEFFHGLFDMVRNYDENHNSSHHSEDSRDGPARNLFAVLDKDNDGHLSDEELLPIIEKIHPSEHYYAKQQAEYIIQQADADKDGRLTL

Query:  TEMI
         E +
Subjt:  TEMI

AT5G08580.1 Calcium-binding EF hand family protein1.5e-5175.76Show/hide
Query:  ERDSDKDGKINFNEFFHGLFDMVRNYDE-NHNSSHHSEDSRDGPARNLFAVLDKDNDGHLSDEELLPIIEKIHPSEHYYAKQQAEYIIQQADADKDGRLT
        ERDSDKDGKI+F EFFHGLFD VRNY+E NHNS+H   D  +GPA+ LF+ LDK++DG+LSD ELLPII KIHP+EHYYAKQQA+YII QAD+DKD RLT
Subjt:  ERDSDKDGKINFNEFFHGLFDMVRNYDE-NHNSSHHSEDSRDGPARNLFAVLDKDNDGHLSDEELLPIIEKIHPSEHYYAKQQAEYIIQQADADKDGRLT

Query:  LTEMIDHPYVFYSAIFNEDD-EDDYDFHDEFR
        L EMI+HPYVFYSAIF+EDD +DDY FHDEFR
Subjt:  LTEMIDHPYVFYSAIFNEDD-EDDYDFHDEFR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACTGTTGCCATCAGTCCCCTCAGTCTCAGCTGGTCAAGGAGAAAATGGGTGTGGCTGGAAGAGGATGGGAGAGAGATTCAGACAAGGATGGAAAGATTAACTTCAA
TGAGTTTTTCCATGGACTCTTTGACATGGTGAGAAATTATGATGAGAATCACAATTCTTCACATCATTCTGAAGATTCCAGGGATGGCCCTGCTAGAAACTTGTTTGCGG
TGCTAGACAAAGATAATGACGGTCACCTGTCTGATGAAGAGCTGTTACCTATAATTGAAAAAATCCACCCATCAGAGCATTACTATGCAAAACAACAAGCAGAATATATC
ATACAGCAGGCTGATGCAGATAAAGATGGTCGTCTCACCTTGACAGAAATGATCGATCATCCTTACGTATTTTACAGTGCCATTTTCAATGAAGACGACGAGGATGATTA
TGATTTCCACGATGAGTTCCGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAACTGTTGCCATCAGTCCCCTCAGTCTCAGCTGGTCAAGGAGAAAATGGGTGTGGCTGGAAGAGGATGGGAGAGAGATTCAGACAAGGATGGAAAGATTAACTTCAA
TGAGTTTTTCCATGGACTCTTTGACATGGTGAGAAATTATGATGAGAATCACAATTCTTCACATCATTCTGAAGATTCCAGGGATGGCCCTGCTAGAAACTTGTTTGCGG
TGCTAGACAAAGATAATGACGGTCACCTGTCTGATGAAGAGCTGTTACCTATAATTGAAAAAATCCACCCATCAGAGCATTACTATGCAAAACAACAAGCAGAATATATC
ATACAGCAGGCTGATGCAGATAAAGATGGTCGTCTCACCTTGACAGAAATGATCGATCATCCTTACGTATTTTACAGTGCCATTTTCAATGAAGACGACGAGGATGATTA
TGATTTCCACGATGAGTTCCGTTAAGTTCTTTCAATTTGTTGCTGTTGCAGGAATAGTTGAATAGTCATAGGTTAGCGGTAGAAGAAAACGGAGTTTTTTCGCAACATGG
AATCAGGATACAGAGTTTGAAGTCTTAGGCAACAACTTGGAAGAGAGCTCTGGCATGGTGGTCAGAACTGGTTTAATCTTCTCCAGCCATGGCTTGCCCATATGGTATCC
TCTTTTTGTAGCATATGAAACCCTTTATCTTGTCTAAGATAACCATGACTTCACACCTTAGATCATAGACATTTATTTAATTTGGTTGCAAATATTTGTTAAGTTCAGTG
TCCTTGGTATAGAATTATCATTTAATTGTTATTTGTTACTAATTTATTCTTCATGGATAGAGAATTATCAATTATTCAAGGTTATATTTATCTTTTGAAGTATAGGGTTT
TGAAAAGTGGGTAGAACAG
Protein sequenceShow/hide protein sequence
MNCCHQSPQSQLVKEKMGVAGRGWERDSDKDGKINFNEFFHGLFDMVRNYDENHNSSHHSEDSRDGPARNLFAVLDKDNDGHLSDEELLPIIEKIHPSEHYYAKQQAEYI
IQQADADKDGRLTLTEMIDHPYVFYSAIFNEDDEDDYDFHDEFR