; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi09G008610 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi09G008610
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionPrefoldin subunit
Genome locationchr09:9926740..9931134
RNA-Seq ExpressionLsi09G008610
SyntenyLsi09G008610
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0006457 - protein folding (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0016272 - prefoldin complex (cellular component)
GO:0051082 - unfolded protein binding (molecular function)
InterPro domainsIPR004127 - Prefoldin alpha-like
IPR009053 - Prefoldin
IPR011599 - Prefoldin alpha subunit, archaea-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004149870.1 probable prefoldin subunit 5 [Cucumis sativus]1.1e-7093.08Show/hide
Query:  MASRKGGSA-GEGARSLELELEKMSVEQLRALKEQTDMEVNLLHDSLNNIRTATSRLDIASAALHDLSLRPQGKKMLVPLTASLYVPGTLDEADKVLVDV
        MASRKGGS+ GEG RSLELELEKMSVEQLRA KEQTDMEVNLLHDSLNNIRTATSRLDIASAALHDLSLRPQGK+MLVPLTASLYVPGTLDEADKVLVDV
Subjt:  MASRKGGSA-GEGARSLELELEKMSVEQLRALKEQTDMEVNLLHDSLNNIRTATSRLDIASAALHDLSLRPQGKKMLVPLTASLYVPGTLDEADKVLVDV

Query:  GTGYFIEKTMAEGKDYCDRKIKLLRSNFDQLIEIATKKKKVADEAGVILQAKLKQTAAT
        GTGYFIEKTMA+GKDYC+RKIKLLRSNFDQLIEIATKKKKVADEAG+ILQAKL+Q  AT
Subjt:  GTGYFIEKTMAEGKDYCDRKIKLLRSNFDQLIEIATKKKKVADEAGVILQAKLKQTAAT

XP_022938455.1 probable prefoldin subunit 5 [Cucurbita moschata]4.7e-7194.34Show/hide
Query:  MASRKGGSAGEGARSLELELEKMSVEQLRALKEQTDMEVNLLHDSLNNIRTATSRLDIASAALHDLSLRPQGKKMLVPLTASLYVPGTLDEADKVLVDVG
        MASRKGGSAGEG RS  LELEKMSVEQL+A KEQ DMEVNLLHDSLNNIRTATSRLDIA+AALHDLSLRPQGKKMLVPLTASLYVPGTLD+ADKVLVDVG
Subjt:  MASRKGGSAGEGARSLELELEKMSVEQLRALKEQTDMEVNLLHDSLNNIRTATSRLDIASAALHDLSLRPQGKKMLVPLTASLYVPGTLDEADKVLVDVG

Query:  TGYFIEKTMAEGKDYCDRKIKLLRSNFDQLIEIATKKKKVADEAGVILQAKLKQTAATT
        TGYFIEKTMAEGKDYCDRKIKLLRSNFDQLIEIATKKKKVADEAGVILQAKLKQ AATT
Subjt:  TGYFIEKTMAEGKDYCDRKIKLLRSNFDQLIEIATKKKKVADEAGVILQAKLKQTAATT

XP_022993145.1 probable prefoldin subunit 5 [Cucurbita maxima]9.0e-7093.08Show/hide
Query:  MASRKGGSAGEGARSLELELEKMSVEQLRALKEQTDMEVNLLHDSLNNIRTATSRLDIASAALHDLSLRPQGKKMLVPLTASLYVPGTLDEADKVLVDVG
        MASRKGGSAGEG RS  LELEKMSVEQL+A KEQTDMEVNLLHDSLNNIRTATSRLDIA+A LHDLSLRPQGKKMLVPLTASLYVPGTLD+ADKV VDVG
Subjt:  MASRKGGSAGEGARSLELELEKMSVEQLRALKEQTDMEVNLLHDSLNNIRTATSRLDIASAALHDLSLRPQGKKMLVPLTASLYVPGTLDEADKVLVDVG

Query:  TGYFIEKTMAEGKDYCDRKIKLLRSNFDQLIEIATKKKKVADEAGVILQAKLKQTAATT
        TGYFIEKTMAEGKDYCD KIKLLRSNFDQLIEIATKKKKVADEAGVILQAKLKQ AATT
Subjt:  TGYFIEKTMAEGKDYCDRKIKLLRSNFDQLIEIATKKKKVADEAGVILQAKLKQTAATT

XP_023549859.1 probable prefoldin subunit 5 [Cucurbita pepo subsp. pepo]9.6e-7294.97Show/hide
Query:  MASRKGGSAGEGARSLELELEKMSVEQLRALKEQTDMEVNLLHDSLNNIRTATSRLDIASAALHDLSLRPQGKKMLVPLTASLYVPGTLDEADKVLVDVG
        MASRKGGSAGEG RS  LELEKMSVEQL+A KEQTDMEVNLLHDSLNNIRTATSRLDIA+AALHDLSLRPQGKKMLVPLTASLYVPGTLD+ADKVLVDVG
Subjt:  MASRKGGSAGEGARSLELELEKMSVEQLRALKEQTDMEVNLLHDSLNNIRTATSRLDIASAALHDLSLRPQGKKMLVPLTASLYVPGTLDEADKVLVDVG

Query:  TGYFIEKTMAEGKDYCDRKIKLLRSNFDQLIEIATKKKKVADEAGVILQAKLKQTAATT
        TGYFIEKTMAEGKDYCDRKIKLLRSNFDQLIEIATKKKKVADEAGVILQAKLKQ AATT
Subjt:  TGYFIEKTMAEGKDYCDRKIKLLRSNFDQLIEIATKKKKVADEAGVILQAKLKQTAATT

XP_038875894.1 probable prefoldin subunit 5 isoform X1 [Benincasa hispida]6.0e-7496.84Show/hide
Query:  MASRKGGSAGEGARSLELELEKMSVEQLRALKEQTDMEVNLLHDSLNNIRTATSRLDIASAALHDLSLRPQGKKMLVPLTASLYVPGTLDEADKVLVDVG
        MASRKGGSAGEG RSLELELEKMSVEQL+ALKEQTDMEVNLLHDSLNNIRTATSRLDIAS ALHDLSLRPQGKKMLVPLTASLYVPGTLDEADKVLVDVG
Subjt:  MASRKGGSAGEGARSLELELEKMSVEQLRALKEQTDMEVNLLHDSLNNIRTATSRLDIASAALHDLSLRPQGKKMLVPLTASLYVPGTLDEADKVLVDVG

Query:  TGYFIEKTMAEGKDYCDRKIKLLRSNFDQLIEIATKKKKVADEAGVILQAKLKQTAAT
        TGYFIEKTMAEGKDYCDRKIKLL+SNFDQLIEIATKKKKVADEAGVILQAKLKQ AAT
Subjt:  TGYFIEKTMAEGKDYCDRKIKLLRSNFDQLIEIATKKKKVADEAGVILQAKLKQTAAT

TrEMBL top hitse value%identityAlignment
A0A0A0KMS5 Uncharacterized protein5.1e-7193.08Show/hide
Query:  MASRKGGSA-GEGARSLELELEKMSVEQLRALKEQTDMEVNLLHDSLNNIRTATSRLDIASAALHDLSLRPQGKKMLVPLTASLYVPGTLDEADKVLVDV
        MASRKGGS+ GEG RSLELELEKMSVEQLRA KEQTDMEVNLLHDSLNNIRTATSRLDIASAALHDLSLRPQGK+MLVPLTASLYVPGTLDEADKVLVDV
Subjt:  MASRKGGSA-GEGARSLELELEKMSVEQLRALKEQTDMEVNLLHDSLNNIRTATSRLDIASAALHDLSLRPQGKKMLVPLTASLYVPGTLDEADKVLVDV

Query:  GTGYFIEKTMAEGKDYCDRKIKLLRSNFDQLIEIATKKKKVADEAGVILQAKLKQTAAT
        GTGYFIEKTMA+GKDYC+RKIKLLRSNFDQLIEIATKKKKVADEAG+ILQAKL+Q  AT
Subjt:  GTGYFIEKTMAEGKDYCDRKIKLLRSNFDQLIEIATKKKKVADEAGVILQAKLKQTAAT

A0A6J1FD74 probable prefoldin subunit 52.3e-7194.34Show/hide
Query:  MASRKGGSAGEGARSLELELEKMSVEQLRALKEQTDMEVNLLHDSLNNIRTATSRLDIASAALHDLSLRPQGKKMLVPLTASLYVPGTLDEADKVLVDVG
        MASRKGGSAGEG RS  LELEKMSVEQL+A KEQ DMEVNLLHDSLNNIRTATSRLDIA+AALHDLSLRPQGKKMLVPLTASLYVPGTLD+ADKVLVDVG
Subjt:  MASRKGGSAGEGARSLELELEKMSVEQLRALKEQTDMEVNLLHDSLNNIRTATSRLDIASAALHDLSLRPQGKKMLVPLTASLYVPGTLDEADKVLVDVG

Query:  TGYFIEKTMAEGKDYCDRKIKLLRSNFDQLIEIATKKKKVADEAGVILQAKLKQTAATT
        TGYFIEKTMAEGKDYCDRKIKLLRSNFDQLIEIATKKKKVADEAGVILQAKLKQ AATT
Subjt:  TGYFIEKTMAEGKDYCDRKIKLLRSNFDQLIEIATKKKKVADEAGVILQAKLKQTAATT

A0A6J1H3F5 probable prefoldin subunit 57.4e-7091.82Show/hide
Query:  MASRKGGSAGEGARSLELELEKMSVEQLRALKEQTDMEVNLLHDSLNNIRTATSRLDIASAALHDLSLRPQGKKMLVPLTASLYVPGTLDEADKVLVDVG
        MASRKGGSAGEG RS  LELEKMSVEQL+A+KEQTDMEVNLLHDSLNNIRTATSRLD ASAALHDLSLRPQGKKMLVPLTASLYVPGTLD+ADKVLVDVG
Subjt:  MASRKGGSAGEGARSLELELEKMSVEQLRALKEQTDMEVNLLHDSLNNIRTATSRLDIASAALHDLSLRPQGKKMLVPLTASLYVPGTLDEADKVLVDVG

Query:  TGYFIEKTMAEGKDYCDRKIKLLRSNFDQLIEIATKKKKVADEAGVILQAKLKQTAATT
        TGYFIEKTMAEGKDYCDRKIKLL+SNFDQLIE+A KKK +ADEAGVILQAKLKQ AATT
Subjt:  TGYFIEKTMAEGKDYCDRKIKLLRSNFDQLIEIATKKKKVADEAGVILQAKLKQTAATT

A0A6J1JP08 probable prefoldin subunit 57.4e-7091.82Show/hide
Query:  MASRKGGSAGEGARSLELELEKMSVEQLRALKEQTDMEVNLLHDSLNNIRTATSRLDIASAALHDLSLRPQGKKMLVPLTASLYVPGTLDEADKVLVDVG
        MASRKGGSAGEG RS  LELEKMSVEQL+A+KEQTDMEVNLLHDSLNNIRTATSRLD ASAALHDLSLRPQGKKMLVPLTASLYVPGTLD+ADKVLVDVG
Subjt:  MASRKGGSAGEGARSLELELEKMSVEQLRALKEQTDMEVNLLHDSLNNIRTATSRLDIASAALHDLSLRPQGKKMLVPLTASLYVPGTLDEADKVLVDVG

Query:  TGYFIEKTMAEGKDYCDRKIKLLRSNFDQLIEIATKKKKVADEAGVILQAKLKQTAATT
        TGYFIEKTMAEGKDYCDRKIKLL+SNFDQLIE+A KKK +ADEAGVILQAKLKQ AATT
Subjt:  TGYFIEKTMAEGKDYCDRKIKLLRSNFDQLIEIATKKKKVADEAGVILQAKLKQTAATT

A0A6J1JVI6 probable prefoldin subunit 54.3e-7093.08Show/hide
Query:  MASRKGGSAGEGARSLELELEKMSVEQLRALKEQTDMEVNLLHDSLNNIRTATSRLDIASAALHDLSLRPQGKKMLVPLTASLYVPGTLDEADKVLVDVG
        MASRKGGSAGEG RS  LELEKMSVEQL+A KEQTDMEVNLLHDSLNNIRTATSRLDIA+A LHDLSLRPQGKKMLVPLTASLYVPGTLD+ADKV VDVG
Subjt:  MASRKGGSAGEGARSLELELEKMSVEQLRALKEQTDMEVNLLHDSLNNIRTATSRLDIASAALHDLSLRPQGKKMLVPLTASLYVPGTLDEADKVLVDVG

Query:  TGYFIEKTMAEGKDYCDRKIKLLRSNFDQLIEIATKKKKVADEAGVILQAKLKQTAATT
        TGYFIEKTMAEGKDYCD KIKLLRSNFDQLIEIATKKKKVADEAGVILQAKLKQ AATT
Subjt:  TGYFIEKTMAEGKDYCDRKIKLLRSNFDQLIEIATKKKKVADEAGVILQAKLKQTAATT

SwissProt top hitse value%identityAlignment
P57742 Probable prefoldin subunit 56.3e-5881.69Show/hide
Query:  ELEKMSVEQLRALKEQTDMEVNLLHDSLNNIRTATSRLDIASAALHDLSLRPQGKKMLVPLTASLYVPGTLDEADKVLVDVGTGYFIEKTMAEGKDYCDR
        E+EKM ++QL+ALKEQ D+EVNLL DSLNNIRTAT RLD A+AAL+DLSLRPQGKKMLVPLTASLYVPGTLDEADKVLVD+GTGYFIEKTM +GKDYC R
Subjt:  ELEKMSVEQLRALKEQTDMEVNLLHDSLNNIRTATSRLDIASAALHDLSLRPQGKKMLVPLTASLYVPGTLDEADKVLVDVGTGYFIEKTMAEGKDYCDR

Query:  KIKLLRSNFDQLIEIATKKKKVADEAGVILQAKLKQ-TAATT
        KI LL+SNFDQL E+A KKK VADEAG++LQAK+KQ TAATT
Subjt:  KIKLLRSNFDQLIEIATKKKKVADEAGVILQAKLKQ-TAATT

Q5RAY0 Prefoldin subunit 51.4e-1733.57Show/hide
Query:  LELEKMSVEQLRALKEQTDMEVNLLHDSLNNIRTATSRLDIASAALHDLSLRPQGKKMLVPLTASLYVPGTLDEADKVLVDVGTGYFIEKTMAEGKDYCD
        + + ++++ QL  LK Q D EV  L  S+  ++   ++   A   L+ L+   +GK++LVPLT+S+YVPG L + + VL+DVGTGY++EKT  + KD+  
Subjt:  LELEKMSVEQLRALKEQTDMEVNLLHDSLNNIRTATSRLDIASAALHDLSLRPQGKKMLVPLTASLYVPGTLDEADKVLVDVGTGYFIEKTMAEGKDYCD

Query:  RKIKLLRSNFDQLIEIATKKKKVADEAGVILQAKLKQTAA
        RKI  L    +++     +K  +      ++  K++Q  A
Subjt:  RKIKLLRSNFDQLIEIATKKKKVADEAGVILQAKLKQTAA

Q8HYI9 Prefoldin subunit 54.1e-1733.58Show/hide
Query:  LELEKMSVEQLRALKEQTDMEVNLLHDSLNNIRTATSRLDIASAALHDLSLRPQGKKMLVPLTASLYVPGTLDEADKVLVDVGTGYFIEKTMAEGKDYCD
        + + ++++ QL  LK Q D EV  L  S+  ++   ++   A   L+ L    +GK++LVPLT+S+YVPG L + + VL+DVGTGY++EKT  + KD+  
Subjt:  LELEKMSVEQLRALKEQTDMEVNLLHDSLNNIRTATSRLDIASAALHDLSLRPQGKKMLVPLTASLYVPGTLDEADKVLVDVGTGYFIEKTMAEGKDYCD

Query:  RKIKLLRSNFDQLIEIATKKKKVADEAGVILQAKLKQ
        RKI  L    +++     +K  +      ++  K++Q
Subjt:  RKIKLLRSNFDQLIEIATKKKKVADEAGVILQAKLKQ

Q99471 Prefoldin subunit 51.8e-1733.57Show/hide
Query:  LELEKMSVEQLRALKEQTDMEVNLLHDSLNNIRTATSRLDIASAALHDLSLRPQGKKMLVPLTASLYVPGTLDEADKVLVDVGTGYFIEKTMAEGKDYCD
        + + ++++ QL  LK Q D EV  L  S+  ++   ++   A   L+ L+   +GK++LVPLT+S+YVPG L + + VL+DVGTGY++EKT  + KD+  
Subjt:  LELEKMSVEQLRALKEQTDMEVNLLHDSLNNIRTATSRLDIASAALHDLSLRPQGKKMLVPLTASLYVPGTLDEADKVLVDVGTGYFIEKTMAEGKDYCD

Query:  RKIKLLRSNFDQLIEIATKKKKVADEAGVILQAKLKQTAA
        RKI  L    +++     +K  +      ++  K++Q  A
Subjt:  RKIKLLRSNFDQLIEIATKKKKVADEAGVILQAKLKQTAA

Q9WU28 Prefoldin subunit 51.8e-1733.57Show/hide
Query:  LELEKMSVEQLRALKEQTDMEVNLLHDSLNNIRTATSRLDIASAALHDLSLRPQGKKMLVPLTASLYVPGTLDEADKVLVDVGTGYFIEKTMAEGKDYCD
        + + ++++ QL  LK Q D EV  L  S+  ++   ++   A   L+ L+   +GK++LVPLT+S+YVPG L + + VL+DVGTGY++EKT  + KD+  
Subjt:  LELEKMSVEQLRALKEQTDMEVNLLHDSLNNIRTATSRLDIASAALHDLSLRPQGKKMLVPLTASLYVPGTLDEADKVLVDVGTGYFIEKTMAEGKDYCD

Query:  RKIKLLRSNFDQLIEIATKKKKVADEAGVILQAKLKQTAA
        RKI  L    +++     +K  +      ++  K++Q  A
Subjt:  RKIKLLRSNFDQLIEIATKKKKVADEAGVILQAKLKQTAA

Arabidopsis top hitse value%identityAlignment
AT5G23290.1 prefoldin 54.4e-5981.69Show/hide
Query:  ELEKMSVEQLRALKEQTDMEVNLLHDSLNNIRTATSRLDIASAALHDLSLRPQGKKMLVPLTASLYVPGTLDEADKVLVDVGTGYFIEKTMAEGKDYCDR
        E+EKM ++QL+ALKEQ D+EVNLL DSLNNIRTAT RLD A+AAL+DLSLRPQGKKMLVPLTASLYVPGTLDEADKVLVD+GTGYFIEKTM +GKDYC R
Subjt:  ELEKMSVEQLRALKEQTDMEVNLLHDSLNNIRTATSRLDIASAALHDLSLRPQGKKMLVPLTASLYVPGTLDEADKVLVDVGTGYFIEKTMAEGKDYCDR

Query:  KIKLLRSNFDQLIEIATKKKKVADEAGVILQAKLKQ-TAATT
        KI LL+SNFDQL E+A KKK VADEAG++LQAK+KQ TAATT
Subjt:  KIKLLRSNFDQLIEIATKKKKVADEAGVILQAKLKQ-TAATT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTCGAGGAAAGGAGGCAGCGCCGGCGAAGGGGCGAGATCGTTGGAATTGGAGTTGGAGAAAATGAGTGTCGAGCAACTCAGAGCCCTCAAGGAACAGACTGATAT
GGAAGTCAATCTCCTTCACGATAGCCTTAACAACATTCGCACAGCCACTTCTCGCCTTGACATTGCCTCCGCTGCCCTCCACGATCTCTCGCTCCGTCCTCAAGGCAAGA
AGATGTTGGTGCCTCTTACTGCGTCGCTTTATGTTCCTGGGACGCTTGATGAGGCCGATAAGGTTTTGGTGGATGTAGGCACTGGATACTTCATTGAGAAAACAATGGCC
GAAGGAAAAGATTACTGTGATCGAAAGATCAAATTGCTGAGGTCGAATTTTGACCAACTAATCGAGATTGCTACTAAAAAGAAGAAAGTAGCAGATGAAGCTGGGGTGAT
CTTACAAGCAAAACTGAAGCAGACGGCTGCTACGACATAG
mRNA sequenceShow/hide mRNA sequence
CGCAGATTGTAGAGAGTTCTGAGATTGAGGAAAGTGAATCCAAAGGCGAGGAGAAGCAATGGCGTCGAGGAAAGGAGGCAGCGCCGGCGAAGGGGCGAGATCGTTGGAAT
TGGAGTTGGAGAAAATGAGTGTCGAGCAACTCAGAGCCCTCAAGGAACAGACTGATATGGAAGTCAATCTCCTTCACGATAGCCTTAACAACATTCGCACAGCCACTTCT
CGCCTTGACATTGCCTCCGCTGCCCTCCACGATCTCTCGCTCCGTCCTCAAGGCAAGAAGATGTTGGTGCCTCTTACTGCGTCGCTTTATGTTCCTGGGACGCTTGATGA
GGCCGATAAGGTTTTGGTGGATGTAGGCACTGGATACTTCATTGAGAAAACAATGGCCGAAGGAAAAGATTACTGTGATCGAAAGATCAAATTGCTGAGGTCGAATTTTG
ACCAACTAATCGAGATTGCTACTAAAAAGAAGAAAGTAGCAGATGAAGCTGGGGTGATCTTACAAGCAAAACTGAAGCAGACGGCTGCTACGACATAGGAAGATGTGTGA
CCATGTAATATCTAAGGCATTGATTGGTTAGTTAAACACAACCCTTGAAGAATTTCAGAATACCAAAACTTTTATAGGGTAGAGATACATGGATGAAATTAGAGGGTCGG
GTTTAGGTCGTATTTGAGGTGTTGGTAAAGCTATAAACTTCTTCACGTACTCACTGGTTGGTTAGAATTTCCATTACTCTTGTGTGTAGTGACTGGTGAGGAGAGGAAGA
TCTATAAGGTCGTATTTGTGTGTAGTGAATGTTGTGCATTTTTAGTTAGCCTGTCTGCCACATGAACTTGTTTCTGAAGAAATTTTGCCCCATCAATTTCATATGTAG
Protein sequenceShow/hide protein sequence
MASRKGGSAGEGARSLELELEKMSVEQLRALKEQTDMEVNLLHDSLNNIRTATSRLDIASAALHDLSLRPQGKKMLVPLTASLYVPGTLDEADKVLVDVGTGYFIEKTMA
EGKDYCDRKIKLLRSNFDQLIEIATKKKKVADEAGVILQAKLKQTAATT