CuGenDBv2

Gene ID	Lsi09G008740
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	protein TIC 40, chloroplastic isoform X1
Genome location	chr09:10166144..10169822
RNA-Seq Expression	Lsi09G008740
Synteny	Lsi09G008740
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004148914.1 protein TIC 40, chloroplastic [Cucumis sativus]

2.1e-136

92.41

Show/hide

Query:  MDRLNLALTSPPKFVFLTYSSTSSISTPTRTNQLCGSRRLASSRIKSPPRIFASAVNRRPNHRILVTERFATVSSSTTSNDSSSVGVPSVSIPPPSSYVG
        MDRLNLALTSPPKF+FLTYSSTSSISTP+RTNQLC +RRL+SSRIKSPPRI ASA+NRRPNHRILV ERFATVSSSTTSNDSSSVGVPSVSIPPPSSYVG
Subjt:  MDRLNLALTSPPKFVFLTYSSTSSISTPTRTNQLCGSRRLASSRIKSPPRIFASAVNRRPNHRILVTERFATVSSSTTSNDSSSVGVPSVSIPPPSSYVG

Query:  SPLFWVGVGVGLSALFTWVASYLKKYAMQQAFKTMMSQMNSQNSPMSNPTLSSGSPFPIPPTFATGTTVSPSVSEPAASIDVTATKVEDEPVINVKSGTE
        SPLFWVGVGVGLSALFTWVASYLKKYAMQQAFKTMMSQMNSQNSPMSNPTLSSGSPFPIPPTFATGTT+SPSVSEPA SIDVTATKVE+EPV NVKS TE
Subjt:  SPLFWVGVGVGLSALFTWVASYLKKYAMQQAFKTMMSQMNSQNSPMSNPTLSSGSPFPIPPTFATGTTVSPSVSEPAASIDVTATKVEDEPVINVKSGTE

Query:  NMEAKKF---DVSPEETDQKSPFKEDATDTDVSKSAQPTEELPLNGAASKQAFNASDGSQFSRKPGSVLSVEAVEKMMEDPTVQKMIYPY
        NMEAKKF   DVSPEETDQKSPFKEDATD DVSKSAQPT+ELP NGAASKQA+N SDGSQFSRKPGSVLSVEAVEKMMEDPTVQKMIYP+
Subjt:  NMEAKKF---DVSPEETDQKSPFKEDATDTDVSKSAQPTEELPLNGAASKQAFNASDGSQFSRKPGSVLSVEAVEKMMEDPTVQKMIYPY

XP_008463124.1 PREDICTED: protein TIC 40, chloroplastic isoform X1 [Cucumis melo]

3.0e-135

92.07

Show/hide

Query:  MDRLNLALTSPPKFVFLTYSSTSSISTPTRTNQLCGSRRLASSRIKSPPRIFASAVNRRPNHRILVTERFATVSSSTTSNDSSSVGVPSVSIPPPSSYVG
        MDRLNLALTSPPKF+FLTYSS SSISTP+RTNQLC +RRL+SSRIKSPPRI ASA+NRRPNHRILV ERFATVSSSTTSNDSSSVGVPSVSIPPPSSYVG
Subjt:  MDRLNLALTSPPKFVFLTYSSTSSISTPTRTNQLCGSRRLASSRIKSPPRIFASAVNRRPNHRILVTERFATVSSSTTSNDSSSVGVPSVSIPPPSSYVG

Query:  SPLFWVGVGVGLSALFTWVASYLKKYAMQQAFKTMMSQMNSQNSPMSNPTLSSGSPFPIPPTFATGTTVSPSVSEPAASIDVTATKVEDEPVINVKSGTE
        SPLFWVGVGVGLSALFTWVASYLKKYAMQQAFKTMMSQMNSQNSPMSNP LSSGSPFPIPPTFATGTTV+PSVSEPAASIDVTATKVE+EPV NVK+GTE
Subjt:  SPLFWVGVGVGLSALFTWVASYLKKYAMQQAFKTMMSQMNSQNSPMSNPTLSSGSPFPIPPTFATGTTVSPSVSEPAASIDVTATKVEDEPVINVKSGTE

Query:  NMEAKKF---DVSPEETDQKSPFKEDATDTDVSKSAQPTEELPLNGAASKQAFNASDGSQFSRKPGSVLSVEAVEKMMEDPTVQKMIYPY
        NMEAKKF   DVSPEETDQKSPFKEDATD DVSKSAQPTEELP NGAASKQA+  SDGSQFSRKPGSVLSVEAVEKMMEDPTVQKMIYP+
Subjt:  NMEAKKF---DVSPEETDQKSPFKEDATDTDVSKSAQPTEELPLNGAASKQAFNASDGSQFSRKPGSVLSVEAVEKMMEDPTVQKMIYPY

XP_008463125.1 PREDICTED: protein TIC 40, chloroplastic isoform X2 [Cucumis melo]

2.4e-132

91.38

Show/hide

Query:  MDRLNLALTSPPKFVFLTYSSTSSISTPTRTNQLCGSRRLASSRIKSPPRIFASAVNRRPNHRILVTERFATVSSSTTSNDSSSVGVPSVSIPPPSSYVG
        MDRLNLALTSPPKF+FLTYSS SSISTP+RTNQLC +RRL+SSRIKSPPRI ASA+NRRPNHRILV ERFATVSSSTTSNDSSSVGVPSVSIPPPSSYVG
Subjt:  MDRLNLALTSPPKFVFLTYSSTSSISTPTRTNQLCGSRRLASSRIKSPPRIFASAVNRRPNHRILVTERFATVSSSTTSNDSSSVGVPSVSIPPPSSYVG

Query:  SPLFWVGVGVGLSALFTWVASYLKKYAMQQAFKTMMSQMNSQNSPMSNPTLSSGSPFPIPPTFATGTTVSPSVSEPAASIDVTATKVEDEPVINVKSGTE
        SPLFWVGVGVGLSALFTWVASYLKKYAMQQAFKTMMSQMNSQNSPMSNP LSSGSPFPIPPTFATGTTV+PSVSEPAASIDVTATKVE+EPV NVK+GTE
Subjt:  SPLFWVGVGVGLSALFTWVASYLKKYAMQQAFKTMMSQMNSQNSPMSNPTLSSGSPFPIPPTFATGTTVSPSVSEPAASIDVTATKVEDEPVINVKSGTE

Query:  NMEAKKF---DVSPEETDQKSPFKEDATDTDVSKSAQPTEELPLNGAASKQAFNASDGSQFSRKPGSVLSVEAVEKMMEDPTVQKMIYPY
        NMEAKKF   DVSPEETDQKSPFKEDATD DVSKSAQPTEE   NGAASKQA+  SDGSQFSRKPGSVLSVEAVEKMMEDPTVQKMIYP+
Subjt:  NMEAKKF---DVSPEETDQKSPFKEDATDTDVSKSAQPTEELPLNGAASKQAFNASDGSQFSRKPGSVLSVEAVEKMMEDPTVQKMIYPY

XP_038877065.1 protein TIC 40, chloroplastic isoform X1 [Benincasa hispida]

5.7e-134

91.72

Show/hide

Query:  MDRLNLALTSPPKFVFLTYSSTSSISTPTRTNQLCGSRRLASSRIKSPPRIFASAVNRRPNHRILVTERFATVSSSTTSNDSSSVGVPSVSIPPPSSYVG
        MDRLNLALTSPPK +FLTYSSTSSISTPTRT+QLCG+RR A+SRI  PPRIFASA+NRRPNHRILV ERFA+VSSSTTSNDSSSVGVPSVSIPPPSSYVG
Subjt:  MDRLNLALTSPPKFVFLTYSSTSSISTPTRTNQLCGSRRLASSRIKSPPRIFASAVNRRPNHRILVTERFATVSSSTTSNDSSSVGVPSVSIPPPSSYVG

Query:  SPLFWVGVGVGLSALFTWVASYLKKYAMQQAFKTMMSQMNSQNSPMSNPTLSSGSPFPIPPTFATGTTVSPSVSEPAASIDVTATKVEDEPVINVKSGTE
        SPLFWVGVGVGLSALFTWVASYLKKYAMQQAFKTMMSQMNSQNSPMSNPTLSSGSPFP+PPTFATGTTVSPSVSEPAASIDVT TKVE+EPVINVKSGTE
Subjt:  SPLFWVGVGVGLSALFTWVASYLKKYAMQQAFKTMMSQMNSQNSPMSNPTLSSGSPFPIPPTFATGTTVSPSVSEPAASIDVTATKVEDEPVINVKSGTE

Query:  NMEAKKF---DVSPEETDQKSPFKEDATDTDVSKSAQPTEELPLNGAASKQAFNASDGSQFSRKPGSVLSVEAVEKMMEDPTVQKMIYPY
        N EAKKF   DVSPEETDQ SPFKEDATD DVSKSAQPTEELP NGAASKQAFN S+GSQFSRKPGSVLSVEAVEKMMEDPTVQKMIYP+
Subjt:  NMEAKKF---DVSPEETDQKSPFKEDATDTDVSKSAQPTEELPLNGAASKQAFNASDGSQFSRKPGSVLSVEAVEKMMEDPTVQKMIYPY

XP_038877066.1 protein TIC 40, chloroplastic isoform X2 [Benincasa hispida]

4.5e-131

91.03

Show/hide

Query:  MDRLNLALTSPPKFVFLTYSSTSSISTPTRTNQLCGSRRLASSRIKSPPRIFASAVNRRPNHRILVTERFATVSSSTTSNDSSSVGVPSVSIPPPSSYVG
        MDRLNLALTSPPK +FLTYSSTSSISTPTRT+QLCG+RR A+SRI  PPRIFASA+NRRPNHRILV ERFA+VSSSTTSNDSSSVGVPSVSIPPPSSYVG
Subjt:  MDRLNLALTSPPKFVFLTYSSTSSISTPTRTNQLCGSRRLASSRIKSPPRIFASAVNRRPNHRILVTERFATVSSSTTSNDSSSVGVPSVSIPPPSSYVG

Query:  SPLFWVGVGVGLSALFTWVASYLKKYAMQQAFKTMMSQMNSQNSPMSNPTLSSGSPFPIPPTFATGTTVSPSVSEPAASIDVTATKVEDEPVINVKSGTE
        SPLFWVGVGVGLSALFTWVASYLKKYAMQQAFKTMMSQMNSQNSPMSNPTLSSGSPFP+PPTFATGTTVSPSVSEPAASIDVT TKVE+EPVINVKSGTE
Subjt:  SPLFWVGVGVGLSALFTWVASYLKKYAMQQAFKTMMSQMNSQNSPMSNPTLSSGSPFPIPPTFATGTTVSPSVSEPAASIDVTATKVEDEPVINVKSGTE

Query:  NMEAKKF---DVSPEETDQKSPFKEDATDTDVSKSAQPTEELPLNGAASKQAFNASDGSQFSRKPGSVLSVEAVEKMMEDPTVQKMIYPY
        N EAKKF   DVSPEETDQ SPFKEDATD DVSKSAQPTEE   NGAASKQAFN S+GSQFSRKPGSVLSVEAVEKMMEDPTVQKMIYP+
Subjt:  NMEAKKF---DVSPEETDQKSPFKEDATDTDVSKSAQPTEELPLNGAASKQAFNASDGSQFSRKPGSVLSVEAVEKMMEDPTVQKMIYPY

TrEMBL top hits

e value

%identity

Alignment

A0A1S3CIG9 protein TIC 40, chloroplastic isoform X1

1.5e-135

92.07

Show/hide

Query:  MDRLNLALTSPPKFVFLTYSSTSSISTPTRTNQLCGSRRLASSRIKSPPRIFASAVNRRPNHRILVTERFATVSSSTTSNDSSSVGVPSVSIPPPSSYVG
        MDRLNLALTSPPKF+FLTYSS SSISTP+RTNQLC +RRL+SSRIKSPPRI ASA+NRRPNHRILV ERFATVSSSTTSNDSSSVGVPSVSIPPPSSYVG
Subjt:  MDRLNLALTSPPKFVFLTYSSTSSISTPTRTNQLCGSRRLASSRIKSPPRIFASAVNRRPNHRILVTERFATVSSSTTSNDSSSVGVPSVSIPPPSSYVG

Query:  SPLFWVGVGVGLSALFTWVASYLKKYAMQQAFKTMMSQMNSQNSPMSNPTLSSGSPFPIPPTFATGTTVSPSVSEPAASIDVTATKVEDEPVINVKSGTE
        SPLFWVGVGVGLSALFTWVASYLKKYAMQQAFKTMMSQMNSQNSPMSNP LSSGSPFPIPPTFATGTTV+PSVSEPAASIDVTATKVE+EPV NVK+GTE
Subjt:  SPLFWVGVGVGLSALFTWVASYLKKYAMQQAFKTMMSQMNSQNSPMSNPTLSSGSPFPIPPTFATGTTVSPSVSEPAASIDVTATKVEDEPVINVKSGTE

Query:  NMEAKKF---DVSPEETDQKSPFKEDATDTDVSKSAQPTEELPLNGAASKQAFNASDGSQFSRKPGSVLSVEAVEKMMEDPTVQKMIYPY
        NMEAKKF   DVSPEETDQKSPFKEDATD DVSKSAQPTEELP NGAASKQA+  SDGSQFSRKPGSVLSVEAVEKMMEDPTVQKMIYP+
Subjt:  NMEAKKF---DVSPEETDQKSPFKEDATDTDVSKSAQPTEELPLNGAASKQAFNASDGSQFSRKPGSVLSVEAVEKMMEDPTVQKMIYPY

A0A1S3CIH5 protein TIC 40, chloroplastic isoform X2

1.2e-132

91.38

Show/hide

Query:  MDRLNLALTSPPKFVFLTYSSTSSISTPTRTNQLCGSRRLASSRIKSPPRIFASAVNRRPNHRILVTERFATVSSSTTSNDSSSVGVPSVSIPPPSSYVG
        MDRLNLALTSPPKF+FLTYSS SSISTP+RTNQLC +RRL+SSRIKSPPRI ASA+NRRPNHRILV ERFATVSSSTTSNDSSSVGVPSVSIPPPSSYVG
Subjt:  MDRLNLALTSPPKFVFLTYSSTSSISTPTRTNQLCGSRRLASSRIKSPPRIFASAVNRRPNHRILVTERFATVSSSTTSNDSSSVGVPSVSIPPPSSYVG

Query:  SPLFWVGVGVGLSALFTWVASYLKKYAMQQAFKTMMSQMNSQNSPMSNPTLSSGSPFPIPPTFATGTTVSPSVSEPAASIDVTATKVEDEPVINVKSGTE
        SPLFWVGVGVGLSALFTWVASYLKKYAMQQAFKTMMSQMNSQNSPMSNP LSSGSPFPIPPTFATGTTV+PSVSEPAASIDVTATKVE+EPV NVK+GTE
Subjt:  SPLFWVGVGVGLSALFTWVASYLKKYAMQQAFKTMMSQMNSQNSPMSNPTLSSGSPFPIPPTFATGTTVSPSVSEPAASIDVTATKVEDEPVINVKSGTE

Query:  NMEAKKF---DVSPEETDQKSPFKEDATDTDVSKSAQPTEELPLNGAASKQAFNASDGSQFSRKPGSVLSVEAVEKMMEDPTVQKMIYPY
        NMEAKKF   DVSPEETDQKSPFKEDATD DVSKSAQPTEE   NGAASKQA+  SDGSQFSRKPGSVLSVEAVEKMMEDPTVQKMIYP+
Subjt:  NMEAKKF---DVSPEETDQKSPFKEDATDTDVSKSAQPTEELPLNGAASKQAFNASDGSQFSRKPGSVLSVEAVEKMMEDPTVQKMIYPY

A0A6J1FIY5 protein TIC 40, chloroplastic-like isoform X1

6.9e-125

86.9

Show/hide

Query:  MDRLNLALTSPPKFVFLTYSSTSSISTPTRTNQLCGSRRLASSRIKSPPRIFASAVNRRPNHRILVTERFATVSSSTTSNDSSSVGVPSVSIPPPSSYVG
        MDRLNLALTS PKFVFL YSSTSSISTPTRTNQLCGSRRLA SRIK PPRI ASA NRR NHRI+V ERFA+VSSSTTSN+SSSVGVPSVS+PPPSSYVG
Subjt:  MDRLNLALTSPPKFVFLTYSSTSSISTPTRTNQLCGSRRLASSRIKSPPRIFASAVNRRPNHRILVTERFATVSSSTTSNDSSSVGVPSVSIPPPSSYVG

Query:  SPLFWVGVGVGLSALFTWVASYLKKYAMQQAFKTMMSQMNSQNSPMSNPTLSSGSPFPIPPTFATGTTVSPSVSEPAASIDVTATKVEDEPVINVKSGTE
        SPLFWVGVGVGLSALFTWVASYLKKYAMQQAFKTMMSQMNSQN+ MSN T   GSPF +PPTFATGT VSPSVSE AASIDVTATKVEDEPV NVK  TE
Subjt:  SPLFWVGVGVGLSALFTWVASYLKKYAMQQAFKTMMSQMNSQNSPMSNPTLSSGSPFPIPPTFATGTTVSPSVSEPAASIDVTATKVEDEPVINVKSGTE

Query:  NMEAKKF---DVSPEETDQKSPFKEDATDTDVSKSAQPTEELPLNGAASKQAFNASDGSQFSRKPGSVLSVEAVEKMMEDPTVQKMIYPY
        NMEAKKF   DVSPEETDQKSPFKE+ATDTDVSKSAQP+ E P NGAASKQAFN S+GSQFSRKPG  LSVEAVEKMMEDPTVQKMIYP+
Subjt:  NMEAKKF---DVSPEETDQKSPFKEDATDTDVSKSAQPTEELPLNGAASKQAFNASDGSQFSRKPGSVLSVEAVEKMMEDPTVQKMIYPY

A0A6J1JYZ5 protein TIC 40, chloroplastic-like isoform X2

2.2e-123

87.29

Show/hide

Query:  MDRLNLALTSPPKFVFLTYSSTSSISTPTRTNQLCGSRRLASSRIKSPPRIFASAVNRRPNHRILVTERFATVSSSTTSNDSSSVGVPSVSIPPPSSYVG
        MDRLNLALTS PKFVFL YSSTSSISTPTRTNQLCGSRRLA SRIK PPRI ASAVNRR NHRI+V ERFA+VSSSTTSN+SSSVGVPSVS+PPPSSYVG
Subjt:  MDRLNLALTSPPKFVFLTYSSTSSISTPTRTNQLCGSRRLASSRIKSPPRIFASAVNRRPNHRILVTERFATVSSSTTSNDSSSVGVPSVSIPPPSSYVG

Query:  SPLFWVGVGVGLSALFTWVASYLKKYAMQQAFKTMMSQMNSQNSPMSNPTLSSGSPFPIPPTFATGTTVSPSVSEPAASIDVTATKVEDEPVINVKSGTE
        SPLFWVGVGVGLSALFTWVASYLKKYAMQQAFKTMMSQMNSQN+PMSN T   GSPFP+PPTFATGT VSPSVSE AASIDVTATKVEDEPV NVKS TE
Subjt:  SPLFWVGVGVGLSALFTWVASYLKKYAMQQAFKTMMSQMNSQNSPMSNPTLSSGSPFPIPPTFATGTTVSPSVSEPAASIDVTATKVEDEPVINVKSGTE

Query:  NMEAKKF---DVSPEETDQKSPFKEDATDTDVSKSAQPTEELPL-NGAASKQAFNASDGSQFSRKPGSVLSVEAVEKMMEDPTVQKMIYPY
        NMEAKKF   DVSPEETDQKSPFKE+ATDTDVSKSAQ    LP+ NGAASKQAFN S+GSQFSRK G  LSVEAVEKMMEDPTVQKMIYP+
Subjt:  NMEAKKF---DVSPEETDQKSPFKEDATDTDVSKSAQPTEELPL-NGAASKQAFNASDGSQFSRKPGSVLSVEAVEKMMEDPTVQKMIYPY

A0A6J1K0V5 protein TIC 40, chloroplastic-like isoform X1

1.8e-125

87.59

Show/hide

Query:  MDRLNLALTSPPKFVFLTYSSTSSISTPTRTNQLCGSRRLASSRIKSPPRIFASAVNRRPNHRILVTERFATVSSSTTSNDSSSVGVPSVSIPPPSSYVG
        MDRLNLALTS PKFVFL YSSTSSISTPTRTNQLCGSRRLA SRIK PPRI ASAVNRR NHRI+V ERFA+VSSSTTSN+SSSVGVPSVS+PPPSSYVG
Subjt:  MDRLNLALTSPPKFVFLTYSSTSSISTPTRTNQLCGSRRLASSRIKSPPRIFASAVNRRPNHRILVTERFATVSSSTTSNDSSSVGVPSVSIPPPSSYVG

Query:  SPLFWVGVGVGLSALFTWVASYLKKYAMQQAFKTMMSQMNSQNSPMSNPTLSSGSPFPIPPTFATGTTVSPSVSEPAASIDVTATKVEDEPVINVKSGTE
        SPLFWVGVGVGLSALFTWVASYLKKYAMQQAFKTMMSQMNSQN+PMSN T   GSPFP+PPTFATGT VSPSVSE AASIDVTATKVEDEPV NVKS TE
Subjt:  SPLFWVGVGVGLSALFTWVASYLKKYAMQQAFKTMMSQMNSQNSPMSNPTLSSGSPFPIPPTFATGTTVSPSVSEPAASIDVTATKVEDEPVINVKSGTE

Query:  NMEAKKF---DVSPEETDQKSPFKEDATDTDVSKSAQPTEELPLNGAASKQAFNASDGSQFSRKPGSVLSVEAVEKMMEDPTVQKMIYPY
        NMEAKKF   DVSPEETDQKSPFKE+ATDTDVSKSAQ   E P NGAASKQAFN S+GSQFSRK G  LSVEAVEKMMEDPTVQKMIYP+
Subjt:  NMEAKKF---DVSPEETDQKSPFKEDATDTDVSKSAQPTEELPLNGAASKQAFNASDGSQFSRKPGSVLSVEAVEKMMEDPTVQKMIYPY

SwissProt top hits

e value

%identity

Alignment

Q8GT66 Protein TIC 40, chloroplastic

4.1e-42

43.87

Show/hide

Query:  MDRLNLALTSPPKFVFLTYSSTSSISTPTRTNQLCGSRRLASSRIKSPPRIFA-SAVNRRPNHRILVTERFATVSSSTTSNDSSSVGVPSVSIPPPSSYV
        M+ LNLAL S PK + L +SS+ ++ +  ++      R  A+S      R  + S  N +     +    FA++SSS    +++SVGV     PPP S V
Subjt:  MDRLNLALTSPPKFVFLTYSSTSSISTPTRTNQLCGSRRLASSRIKSPPRIFA-SAVNRRPNHRILVTERFATVSSSTTSNDSSSVGVPSVSIPPPSSYV

Query:  GSPLFWVGVGVGLSALFTWVASYLKKYAMQQAFKTMMSQMNSQNSPMSNPTLSSGSPFPIPPTFATG-------------TTVSPSVSEPAASIDVTATK
        GSPLFW+G+GVG SALF+ VAS +KKYAMQQAFK+MM QMN+QN+P  +   SSG PFP P   A+G              T + S S+   ++D+ ATK
Subjt:  GSPLFWVGVGVGLSALFTWVASYLKKYAMQQAFKTMMSQMNSQNSPMSNPTLSSGSPFPIPPTFATG-------------TTVSPSVSEPAASIDVTATK

Query:  VE---DEPVINVKSGTE-NMEAKK---FDVSPEETDQKSPFK--EDATDTDVSKSAQPTEELPLNGAASKQAFNASDGSQFSRKPGSVLSVEAVEKMMED
        VE     P INVK   E   E KK    DVSPEET QK+ F+  +D  ++   K A+   E   NG   KQ F  S  S   RK  S LSV+A+EKMMED
Subjt:  VE---DEPVINVKSGTE-NMEAKK---FDVSPEETDQKSPFK--EDATDTDVSKSAQPTEELPLNGAASKQAFNASDGSQFSRKPGSVLSVEAVEKMMED

Query:  PTVQKMIYPY
        PTVQ+M+YPY
Subjt:  PTVQKMIYPY

Q9FMD5 Protein TIC 40, chloroplastic

2.7e-41

41.88

Show/hide

Query:  SPPKFVFLTYSSTSSISTPTRTNQLCGSRRLASSRIKSPPRIFASAVNRRPNHR-------ILVTER---FATVSSSTTSNDSSSVGVPSVSIPPP-SSY
        S PK + +  + TSS+  PT      G  R   + +    +I ASA ++ P+ R       ++V +R   FA++ SS+    ++SV  PSV +PPP SS 
Subjt:  SPPKFVFLTYSSTSSISTPTRTNQLCGSRRLASSRIKSPPRIFASAVNRRPNHR-------ILVTER---FATVSSSTTSNDSSSVGVPSVSIPPP-SSY

Query:  VGSPLFWVGVGVGLSALFTWVASYLKKYAMQQAFKTMMSQMNSQNSPMSNPTLSSGSPFPIPPTFATGTTVSPSVSE---PAASIDVTATKVE-------
        +GSPLFW+GVGVGLSALF++V S LKKYAMQ A KTMM+QMN+QNS  +N    SGSPFP P    T    SP  S+     A++DVTATKVE       
Subjt:  VGSPLFWVGVGVGLSALFTWVASYLKKYAMQQAFKTMMSQMNSQNSPMSNPTLSSGSPFPIPPTFATGTTVSPSVSE---PAASIDVTATKVE-------

Query:  ----------DEPVINVKSGTENMEAKKF---DVSPEETDQKSPFKE--DATDTDVSKSAQPTEEL------PLNGAASKQAFNASDGSQFSRKPGSVLS
                  D+P + +++  E  E K +   D+SPEET ++SPF    + ++T+  K  +  E++      P NGA + + F +  G     K G  LS
Subjt:  ----------DEPVINVKSGTENMEAKKF---DVSPEETDQKSPFKE--DATDTDVSKSAQPTEEL------PLNGAASKQAFNASDGSQFSRKPGSVLS

Query:  VEAVEKMMEDPTVQKMIYPY
        VEA+EKMMEDPTVQKM+YPY
Subjt:  VEAVEKMMEDPTVQKMIYPY

Arabidopsis top hits

e value

%identity

Alignment

AT5G16620.1 hydroxyproline-rich glycoprotein family protein

1.9e-42

41.88

Show/hide

Query:  SPPKFVFLTYSSTSSISTPTRTNQLCGSRRLASSRIKSPPRIFASAVNRRPNHR-------ILVTER---FATVSSSTTSNDSSSVGVPSVSIPPP-SSY
        S PK + +  + TSS+  PT      G  R   + +    +I ASA ++ P+ R       ++V +R   FA++ SS+    ++SV  PSV +PPP SS 
Subjt:  SPPKFVFLTYSSTSSISTPTRTNQLCGSRRLASSRIKSPPRIFASAVNRRPNHR-------ILVTER---FATVSSSTTSNDSSSVGVPSVSIPPP-SSY

Query:  VGSPLFWVGVGVGLSALFTWVASYLKKYAMQQAFKTMMSQMNSQNSPMSNPTLSSGSPFPIPPTFATGTTVSPSVSE---PAASIDVTATKVE-------
        +GSPLFW+GVGVGLSALF++V S LKKYAMQ A KTMM+QMN+QNS  +N    SGSPFP P    T    SP  S+     A++DVTATKVE       
Subjt:  VGSPLFWVGVGVGLSALFTWVASYLKKYAMQQAFKTMMSQMNSQNSPMSNPTLSSGSPFPIPPTFATGTTVSPSVSE---PAASIDVTATKVE-------

Query:  ----------DEPVINVKSGTENMEAKKF---DVSPEETDQKSPFKE--DATDTDVSKSAQPTEEL------PLNGAASKQAFNASDGSQFSRKPGSVLS
                  D+P + +++  E  E K +   D+SPEET ++SPF    + ++T+  K  +  E++      P NGA + + F +  G     K G  LS
Subjt:  ----------DEPVINVKSGTENMEAKKF---DVSPEETDQKSPFKE--DATDTDVSKSAQPTEEL------PLNGAASKQAFNASDGSQFSRKPGSVLS

Query:  VEAVEKMMEDPTVQKMIYPY
        VEA+EKMMEDPTVQKM+YPY
Subjt:  VEAVEKMMEDPTVQKMIYPY

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGACAGGCTCAATTTAGCCCTAACATCTCCTCCCAAGTTTGTTTTTCTCACATATTCTTCTACTTCTTCTATCTCCACTCCCACCAGAACCAATCAATTATGTGGAAG
CAGGCGCTTGGCAAGCTCCAGGATTAAGTCTCCTCCCAGAATTTTTGCTTCTGCTGTTAATCGTCGACCCAACCACCGTATCCTCGTGACTGAACGGTTTGCAACGGTTT
CTTCTTCGACTACCAGCAATGATTCGTCTTCTGTTGGTGTTCCATCAGTATCTATTCCTCCTCCCTCCTCATATGTAGGGTCGCCTCTCTTTTGGGTTGGTGTTGGTGTT
GGGCTTTCAGCATTATTTACATGGGTGGCTTCTTACTTAAAGAAATATGCAATGCAACAAGCTTTCAAGACGATGATGTCTCAAATGAATTCTCAAAACAGCCCAATGAG
TAATCCTACTCTGTCGTCTGGATCACCTTTTCCAATACCTCCGACATTTGCAACTGGCACAACAGTTTCTCCATCTGTTTCTGAACCTGCTGCGTCAATTGATGTAACTG
CAACAAAAGTTGAAGACGAACCAGTTATTAATGTCAAAAGTGGGACAGAGAACATGGAAGCAAAGAAGTTTGACGTTTCTCCTGAAGAAACTGACCAAAAGAGTCCATTC
AAGGAAGATGCCACAGACACAGATGTTTCAAAGAGTGCTCAGCCGACTGAGGAACTTCCATTGAATGGAGCTGCTTCTAAGCAGGCGTTTAATGCTTCAGATGGATCACA
ATTCAGTCGAAAACCTGGCTCAGTCTTATCAGTGGAAGCCGTGGAGAAAATGATGGAAGATCCGACAGTACAGAAGATGATATATCCGTATGCAGCTTTTACTGTTTATC
TACTTCATAATTTGGTTGCCCCATAT

mRNA sequence

Show/hide mRNA sequence

CCGCAAGCAGATGATCCGGACCAATGAATCAAATGAAGCCCAGAAGTAAACTCTGCCCAGAAAATTTGTTCGGTCTTCACTCTCTGAACTAAACCCAAAGCTTCCCTTCC
AAGGGCAAGCCTATCTTCTTCTTCTTCTTCCTCCTCCTACAATTCTTCACTGTTTATCATCCCATCAAACTGAAAACAAATCAATGGACAGGCTCAATTTAGCCCTAACA
TCTCCTCCCAAGTTTGTTTTTCTCACATATTCTTCTACTTCTTCTATCTCCACTCCCACCAGAACCAATCAATTATGTGGAAGCAGGCGCTTGGCAAGCTCCAGGATTAA
GTCTCCTCCCAGAATTTTTGCTTCTGCTGTTAATCGTCGACCCAACCACCGTATCCTCGTGACTGAACGGTTTGCAACGGTTTCTTCTTCGACTACCAGCAATGATTCGT
CTTCTGTTGGTGTTCCATCAGTATCTATTCCTCCTCCCTCCTCATATGTAGGGTCGCCTCTCTTTTGGGTTGGTGTTGGTGTTGGGCTTTCAGCATTATTTACATGGGTG
GCTTCTTACTTAAAGAAATATGCAATGCAACAAGCTTTCAAGACGATGATGTCTCAAATGAATTCTCAAAACAGCCCAATGAGTAATCCTACTCTGTCGTCTGGATCACC
TTTTCCAATACCTCCGACATTTGCAACTGGCACAACAGTTTCTCCATCTGTTTCTGAACCTGCTGCGTCAATTGATGTAACTGCAACAAAAGTTGAAGACGAACCAGTTA
TTAATGTCAAAAGTGGGACAGAGAACATGGAAGCAAAGAAGTTTGACGTTTCTCCTGAAGAAACTGACCAAAAGAGTCCATTCAAGGAAGATGCCACAGACACAGATGTT
TCAAAGAGTGCTCAGCCGACTGAGGAACTTCCATTGAATGGAGCTGCTTCTAAGCAGGCGTTTAATGCTTCAGATGGATCACAATTCAGTCGAAAACCTGGCTCAGTCTT
ATCAGTGGAAGCCGTGGAGAAAATGATGGAAGATCCGACAGTACAGAAGATGATATATCCGTATGCAGCTTTTACTGTTTATCTACTTCATAATTTGGTTGCCCCATAT

Protein sequence

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MDRLNLALTSPPKFVFLTYSSTSSISTPTRTNQLCGSRRLASSRIKSPPRIFASAVNRRPNHRILVTERFATVSSSTTSNDSSSVGVPSVSIPPPSSYVGSPLFWVGVGV
GLSALFTWVASYLKKYAMQQAFKTMMSQMNSQNSPMSNPTLSSGSPFPIPPTFATGTTVSPSVSEPAASIDVTATKVEDEPVINVKSGTENMEAKKFDVSPEETDQKSPF
KEDATDTDVSKSAQPTEELPLNGAASKQAFNASDGSQFSRKPGSVLSVEAVEKMMEDPTVQKMIYPYAAFTVYLLHNLVAPY

Lsi09G008740 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome