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Lsi09G008800 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi09G008800
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionGRIP and coiled-coil domain-containing protein 1
Genome locationchr09:10264407..10269297
RNA-Seq ExpressionLsi09G008800
SyntenyLsi09G008800
Gene Ontology termsGO:0006979 - response to oxidative stress (biological process)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6579058.1 hypothetical protein SDJN03_23506, partial [Cucurbita argyrosperma subsp. sororia]9.1e-2986.9Show/hide
Query:  KKRQSSLSSVAMARASGRSRNVNESSGGGFLKAAFRFLKMAEFEILFVLFFVVAFIVFKDLTSRPEYNQILVKKPEGFDMWPFQ
        +KR+S  SSVAMARA GRSR+ NE SGGGFLKA FR LKMAEFEILFVLFF+VAFIVFKDLTSRPEYNQILVKKPEGFDMWPFQ
Subjt:  KKRQSSLSSVAMARASGRSRNVNESSGGGFLKAAFRFLKMAEFEILFVLFFVVAFIVFKDLTSRPEYNQILVKKPEGFDMWPFQ
XP_008463128.1 PREDICTED: uncharacterized protein LOC103501353 [Cucumis melo]2.7e-2893.15Show/hide
Query:  MARASGRSRNVNESSGGGFLKAAFRFLKMAEFEILFVLFFVVAFIVFKDLTSRPEYNQILVKKPEGFDMWPFQ
        MARASGRSRN ++SSGGGFLKA FRFLKMAEFEILFVLFF+VAFIVFKDLTSRPEYNQILVKKPEGFDMWPFQ
Subjt:  MARASGRSRNVNESSGGGFLKAAFRFLKMAEFEILFVLFFVVAFIVFKDLTSRPEYNQILVKKPEGFDMWPFQ
XP_011655131.2 uncharacterized protein LOC101207856 [Cucumis sativus]3.5e-2890.67Show/hide
Query:  MARASGRSRNVNESSGGGFLKAAFRFLKMAEFEILFVLFFVVAFIVFKDLTSRPEYNQILVKKPEGFDMWPFQMM
        MARA+GR RN  +SSGGGFLKA FRFLKMAEFEILFVLFF+VAFIVFKDLTSRPEYNQILVKKPEGFDMWPFQMM
Subjt:  MARASGRSRNVNESSGGGFLKAAFRFLKMAEFEILFVLFFVVAFIVFKDLTSRPEYNQILVKKPEGFDMWPFQMM
XP_022938472.1 uncharacterized protein LOC111444698 [Cucurbita moschata]1.9e-2689.04Show/hide
Query:  MARASGRSRNVNESSGGGFLKAAFRFLKMAEFEILFVLFFVVAFIVFKDLTSRPEYNQILVKKPEGFDMWPFQ
        MARA GRSR+ NE SGGGFLKA FR LKM EFEILFVLFF+VAFIVFKDLTSRPEYNQILVKKPEGFDMWPFQ
Subjt:  MARASGRSRNVNESSGGGFLKAAFRFLKMAEFEILFVLFFVVAFIVFKDLTSRPEYNQILVKKPEGFDMWPFQ
XP_023549700.1 uncharacterized protein LOC111808120 [Cucurbita pepo subsp. pepo]2.7e-2893.15Show/hide
Query:  MARASGRSRNVNESSGGGFLKAAFRFLKMAEFEILFVLFFVVAFIVFKDLTSRPEYNQILVKKPEGFDMWPFQ
        MARA GRSR+VNE SGGGFLKA FRFLKMAEFEILFVLFF+VAFIVFKDLTSRPEYNQILVKKPEGFDMWPFQ
Subjt:  MARASGRSRNVNESSGGGFLKAAFRFLKMAEFEILFVLFFVVAFIVFKDLTSRPEYNQILVKKPEGFDMWPFQ
TrEMBL top hitse value%identityAlignment
A0A0A0KPT8 Uncharacterized protein1.7e-2890.67Show/hide
Query:  MARASGRSRNVNESSGGGFLKAAFRFLKMAEFEILFVLFFVVAFIVFKDLTSRPEYNQILVKKPEGFDMWPFQMM
        MARA+GR RN  +SSGGGFLKA FRFLKMAEFEILFVLFF+VAFIVFKDLTSRPEYNQILVKKPEGFDMWPFQMM
Subjt:  MARASGRSRNVNESSGGGFLKAAFRFLKMAEFEILFVLFFVVAFIVFKDLTSRPEYNQILVKKPEGFDMWPFQMM
A0A1S3CK24 uncharacterized protein LOC1035013531.3e-2893.15Show/hide
Query:  MARASGRSRNVNESSGGGFLKAAFRFLKMAEFEILFVLFFVVAFIVFKDLTSRPEYNQILVKKPEGFDMWPFQ
        MARASGRSRN ++SSGGGFLKA FRFLKMAEFEILFVLFF+VAFIVFKDLTSRPEYNQILVKKPEGFDMWPFQ
Subjt:  MARASGRSRNVNESSGGGFLKAAFRFLKMAEFEILFVLFFVVAFIVFKDLTSRPEYNQILVKKPEGFDMWPFQ
A0A6J1CIZ9 uncharacterized protein LOC1110117898.6e-2584.93Show/hide
Query:  MARASGRSRNVNESSGGGFLKAAFRFLKMAEFEILFVLFFVVAFIVFKDLTSRPEYNQILVKKPEGFDMWPFQ
        MAR  GRSRN N+S+  GFLKA  RFLKMAEFEILF+LFFVVAFI+FKDLTSRPEYNQILVKKPEGFDMWPFQ
Subjt:  MARASGRSRNVNESSGGGFLKAAFRFLKMAEFEILFVLFFVVAFIVFKDLTSRPEYNQILVKKPEGFDMWPFQ
A0A6J1FE48 uncharacterized protein LOC1114446989.2e-2789.04Show/hide
Query:  MARASGRSRNVNESSGGGFLKAAFRFLKMAEFEILFVLFFVVAFIVFKDLTSRPEYNQILVKKPEGFDMWPFQ
        MARA GRSR+ NE SGGGFLKA FR LKM EFEILFVLFF+VAFIVFKDLTSRPEYNQILVKKPEGFDMWPFQ
Subjt:  MARASGRSRNVNESSGGGFLKAAFRFLKMAEFEILFVLFFVVAFIVFKDLTSRPEYNQILVKKPEGFDMWPFQ
A0A6J1K0Z3 uncharacterized protein LOC1114896591.2e-2689.04Show/hide
Query:  MARASGRSRNVNESSGGGFLKAAFRFLKMAEFEILFVLFFVVAFIVFKDLTSRPEYNQILVKKPEGFDMWPFQ
        MA A GRSR+ NE SGGGFLK  FRFLKMAEFEILFVLFF+VAFIVFKDLTSRPEYNQILVKKPEGFDMWPFQ
Subjt:  MARASGRSRNVNESSGGGFLKAAFRFLKMAEFEILFVLFFVVAFIVFKDLTSRPEYNQILVKKPEGFDMWPFQ
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G14430.1 unknown protein3.6e-1562.96Show/hide
Query:  FLKAAFRFLKMAEFEILFVLFFVVAFIVFKDLTSRPEYNQILVKKPEGFDMWPF
        F+ + F F ++AEFEILFVLF ++ +++FKDLTSRPEYN+ILV+KP G D+WPF
Subjt:  FLKAAFRFLKMAEFEILFVLFFVVAFIVFKDLTSRPEYNQILVKKPEGFDMWPF

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTCGAAGAGGAAAACCCTCTGGAGTTGCCTCGAATGATACTTTGATCGTTGAAGAGAAACCGCGGTTCGTCAAGAAGCGGCAGTCGTCGTTGTCGTCGGTGGCTAT
GGCTCGGGCAAGTGGTCGGAGCAGGAATGTTAACGAATCGTCGGGGGGAGGGTTTCTTAAAGCGGCTTTCAGATTCTTGAAGATGGCGGAATTTGAGATCCTTTTCGTTC
TCTTCTTCGTCGTAGCTTTTATTGTCTTCAAAGATCTTACATCAAGACCAGAGTACAATCAGATCCTTGTAAAGAAGCCTGAAGGATTTGATATGTGGCCATTCCAGATG
ATGTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTTCGAAGAGGAAAACCCTCTGGAGTTGCCTCGAATGATACTTTGATCGTTGAAGAGAAACCGCGGTTCGTCAAGAAGCGGCAGTCGTCGTTGTCGTCGGTGGCTAT
GGCTCGGGCAAGTGGTCGGAGCAGGAATGTTAACGAATCGTCGGGGGGAGGGTTTCTTAAAGCGGCTTTCAGATTCTTGAAGATGGCGGAATTTGAGATCCTTTTCGTTC
TCTTCTTCGTCGTAGCTTTTATTGTCTTCAAAGATCTTACATCAAGACCAGAGTACAATCAGATCCTTGTAAAGAAGCCTGAAGGATTTGATATGTGGCCATTCCAGATG
ATGTAAGAATGTCCACCGATATGTTGACATTTTTACAGATTTTATCGTAAGTTGAGAGATGTAAAATGTTCATCGACATGTTGACAGTTTTTTTTTTTTTTTT
Protein sequenceShow/hide protein sequence
MFRRGKPSGVASNDTLIVEEKPRFVKKRQSSLSSVAMARASGRSRNVNESSGGGFLKAAFRFLKMAEFEILFVLFFVVAFIVFKDLTSRPEYNQILVKKPEGFDMWPFQM
M