CuGenDBv2

Gene ID	Lsi09G009190
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	ADP-ribosylation factor-like A1A
Genome location	chr09:11360420..11362752
RNA-Seq Expression	Lsi09G009190
Synteny	Lsi09G009190
Gene Ontology terms	GO:0015031 - protein transport (biological process) GO:0051607 - defense response to virus (biological process) GO:0005774 - vacuolar membrane (cellular component) GO:0003924 - GTPase activity (molecular function) GO:0005525 - GTP binding (molecular function)
InterPro domains	IPR005225 - Small GTP-binding protein domain IPR006689 - Small GTPase superfamily, ARF/SAR type IPR027417 - P-loop containing nucleoside triphosphate hydrolase

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6602026.1 ADP-ribosylation factor-like protein 8c, partial [Cucurbita argyrosperma subsp. sororia]

5.8e-45

100

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Query:  MGFFDSILNWLRSLFFKQEMELSLVGLQNAGKTSLVNSIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQRRFRTMWERYCRGVTAIV
        MGFFDSILNWLRSLFFKQEMELSLVGLQNAGKTSLVNSIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQRRFRTMWERYCRGVTAIV
Subjt:  MGFFDSILNWLRSLFFKQEMELSLVGLQNAGKTSLVNSIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQRRFRTMWERYCRGVTAIV

XP_004140300.1 ADP-ribosylation factor-like protein 8c [Cucumis sativus]

5.8e-45

100

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Query:  MGFFDSILNWLRSLFFKQEMELSLVGLQNAGKTSLVNSIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQRRFRTMWERYCRGVTAIV
        MGFFDSILNWLRSLFFKQEMELSLVGLQNAGKTSLVNSIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQRRFRTMWERYCRGVTAIV
Subjt:  MGFFDSILNWLRSLFFKQEMELSLVGLQNAGKTSLVNSIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQRRFRTMWERYCRGVTAIV

XP_008460532.1 PREDICTED: ADP-ribosylation factor-like protein 8A [Cucumis melo]

5.8e-45

100

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Query:  MGFFDSILNWLRSLFFKQEMELSLVGLQNAGKTSLVNSIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQRRFRTMWERYCRGVTAIV
        MGFFDSILNWLRSLFFKQEMELSLVGLQNAGKTSLVNSIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQRRFRTMWERYCRGVTAIV
Subjt:  MGFFDSILNWLRSLFFKQEMELSLVGLQNAGKTSLVNSIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQRRFRTMWERYCRGVTAIV

XP_022961143.1 ADP-ribosylation factor-like protein 8c [Cucurbita moschata]

5.8e-45

100

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Query:  MGFFDSILNWLRSLFFKQEMELSLVGLQNAGKTSLVNSIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQRRFRTMWERYCRGVTAIV
        MGFFDSILNWLRSLFFKQEMELSLVGLQNAGKTSLVNSIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQRRFRTMWERYCRGVTAIV
Subjt:  MGFFDSILNWLRSLFFKQEMELSLVGLQNAGKTSLVNSIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQRRFRTMWERYCRGVTAIV

XP_022991181.1 ADP-ribosylation factor-like protein 8c [Cucurbita maxima]

5.8e-45

100

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Query:  MGFFDSILNWLRSLFFKQEMELSLVGLQNAGKTSLVNSIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQRRFRTMWERYCRGVTAIV
        MGFFDSILNWLRSLFFKQEMELSLVGLQNAGKTSLVNSIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQRRFRTMWERYCRGVTAIV
Subjt:  MGFFDSILNWLRSLFFKQEMELSLVGLQNAGKTSLVNSIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQRRFRTMWERYCRGVTAIV

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KN64 Uncharacterized protein

2.8e-45

100

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Query:  MGFFDSILNWLRSLFFKQEMELSLVGLQNAGKTSLVNSIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQRRFRTMWERYCRGVTAIV
        MGFFDSILNWLRSLFFKQEMELSLVGLQNAGKTSLVNSIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQRRFRTMWERYCRGVTAIV
Subjt:  MGFFDSILNWLRSLFFKQEMELSLVGLQNAGKTSLVNSIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQRRFRTMWERYCRGVTAIV

A0A1S3CDX0 ADP-ribosylation factor-like protein 8A

2.8e-45

100

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Query:  MGFFDSILNWLRSLFFKQEMELSLVGLQNAGKTSLVNSIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQRRFRTMWERYCRGVTAIV
        MGFFDSILNWLRSLFFKQEMELSLVGLQNAGKTSLVNSIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQRRFRTMWERYCRGVTAIV
Subjt:  MGFFDSILNWLRSLFFKQEMELSLVGLQNAGKTSLVNSIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQRRFRTMWERYCRGVTAIV

A0A5C7IMR0 Uncharacterized protein

6.9e-44

96.74

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Query:  MGFFDSILNWLRSLFFKQEMELSLVGLQNAGKTSLVNSIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQRRFRTMWERYCRGVTAIV
        MGF DS+LNWLRSLFFKQEMELSLVGLQNAGKTSLVNSIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQRRFRTMWERYCRGV+AIV
Subjt:  MGFFDSILNWLRSLFFKQEMELSLVGLQNAGKTSLVNSIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQRRFRTMWERYCRGVTAIV

A0A6J1HB08 ADP-ribosylation factor-like protein 8c

2.8e-45

100

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Query:  MGFFDSILNWLRSLFFKQEMELSLVGLQNAGKTSLVNSIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQRRFRTMWERYCRGVTAIV
        MGFFDSILNWLRSLFFKQEMELSLVGLQNAGKTSLVNSIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQRRFRTMWERYCRGVTAIV
Subjt:  MGFFDSILNWLRSLFFKQEMELSLVGLQNAGKTSLVNSIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQRRFRTMWERYCRGVTAIV

A0A6J1JQ11 ADP-ribosylation factor-like protein 8c

2.8e-45

100

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Query:  MGFFDSILNWLRSLFFKQEMELSLVGLQNAGKTSLVNSIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQRRFRTMWERYCRGVTAIV
        MGFFDSILNWLRSLFFKQEMELSLVGLQNAGKTSLVNSIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQRRFRTMWERYCRGVTAIV
Subjt:  MGFFDSILNWLRSLFFKQEMELSLVGLQNAGKTSLVNSIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQRRFRTMWERYCRGVTAIV

SwissProt top hits

e value

%identity

Alignment

Q54R04 ADP-ribosylation factor-like protein 8

3.9e-36

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Query:  MGFFDSILNWLRSLFFKQEMELSLVGLQNAGKTSLVNSIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQRRFRTMWERYCRGVTAIV
        M FF+SI+N+ +SLF+KQEMEL+LVGLQ +GKT+LVN I+ GG+ ED IPT+GFNM+KVTKGNVTIKLWD+GGQ RFR+MWERYCRGV AIV
Subjt:  MGFFDSILNWLRSLFFKQEMELSLVGLQNAGKTSLVNSIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQRRFRTMWERYCRGVTAIV

Q5ZKQ8 ADP-ribosylation factor-like protein 8A

4.3e-35

71.74

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Query:  MGFFDSILNWLRSLFFKQEMELSLVGLQNAGKTSLVNSIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQRRFRTMWERYCRGVTAIV
        +  F+ +L+W R+LF+K+EMEL+LVGLQ +GKT+ VN IA+G ++EDMIPTVGFNMRK+TKGNVTIKLWD+GGQ RFR+MWERYCRGV+AIV
Subjt:  MGFFDSILNWLRSLFFKQEMELSLVGLQNAGKTSLVNSIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQRRFRTMWERYCRGVTAIV

Q8VY57 ADP-ribosylation factor-like protein 8a

8.1e-42

86.96

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Query:  MGFFDSILNWLRSLFFKQEMELSLVGLQNAGKTSLVNSIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQRRFRTMWERYCRGVTAIV
        MG  ++ LNWLRSLFFKQEMELSL+GLQNAGKTSLVN +ATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQ RFR+MWERYCR V+AIV
Subjt:  MGFFDSILNWLRSLFFKQEMELSLVGLQNAGKTSLVNSIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQRRFRTMWERYCRGVTAIV

Q8W4C8 ADP-ribosylation factor-like protein 8c

2.7e-45

93.48

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Query:  MGFFDSILNWLRSLFFKQEMELSLVGLQNAGKTSLVNSIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQRRFRTMWERYCRGVTAIV
        MG +DS+LNWLRSLFFKQEMELSLVGLQNAGKTSLVN+IATGGYSEDMIPTVGFNMRKVTKGNVTIK+WDLGGQRRFRTMWERYCRGV+AIV
Subjt:  MGFFDSILNWLRSLFFKQEMELSLVGLQNAGKTSLVNSIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQRRFRTMWERYCRGVTAIV

Q93Y31 ADP-ribosylation factor-like protein 8b

4.7e-42

86.96

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Query:  MGFFDSILNWLRSLFFKQEMELSLVGLQNAGKTSLVNSIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQRRFRTMWERYCRGVTAIV
        MG +D++LNWLRSLFFKQEMELSL+GLQNAGKTSLVN +ATGGYSEDMIPTVGFNMRKVTKG+VTIKLWDLGGQ RFR+MWERYCR V+AIV
Subjt:  MGFFDSILNWLRSLFFKQEMELSLVGLQNAGKTSLVNSIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQRRFRTMWERYCRGVTAIV

Arabidopsis top hits

e value

%identity

Alignment

AT1G70490.1 Ras-related small GTP-binding family protein

3.4e-11

36.71

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Query:  LFFKQEMELSLVGLQNAGKTSLVNSIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQRRFRTMWERYCRGVTAIV
        LF K+EM + +VGL  AGKT+++  +  G      IPT+GFN+  V   N++  +WD+GGQ + R +W  Y +    ++
Subjt:  LFFKQEMELSLVGLQNAGKTSLVNSIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQRRFRTMWERYCRGVTAIV

AT3G49860.1 ADP-ribosylation factor-like A1B

6.6e-31

82.67

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Query:  QEMELSLVGLQNAGKTSLVNSIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQRRFRTMWERYCRGVTAIV
        +EMELSLVGLQN+GKTSLVN +ATG YSEDMIPTVGFNMRKVTK NV I+LWDLGGQ RFR MWERYCR V+ IV
Subjt:  QEMELSLVGLQNAGKTSLVNSIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQRRFRTMWERYCRGVTAIV

AT3G49870.1 ADP-ribosylation factor-like A1C

5.8e-43

86.96

Show/hide

Query:  MGFFDSILNWLRSLFFKQEMELSLVGLQNAGKTSLVNSIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQRRFRTMWERYCRGVTAIV
        MG  ++ LNWLRSLFFKQEMELSL+GLQNAGKTSLVN +ATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQ RFR+MWERYCR V+AIV
Subjt:  MGFFDSILNWLRSLFFKQEMELSLVGLQNAGKTSLVNSIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQRRFRTMWERYCRGVTAIV

AT5G37680.1 ADP-ribosylation factor-like A1A

1.9e-46

93.48

Show/hide

Query:  MGFFDSILNWLRSLFFKQEMELSLVGLQNAGKTSLVNSIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQRRFRTMWERYCRGVTAIV
        MG +DS+LNWLRSLFFKQEMELSLVGLQNAGKTSLVN+IATGGYSEDMIPTVGFNMRKVTKGNVTIK+WDLGGQRRFRTMWERYCRGV+AIV
Subjt:  MGFFDSILNWLRSLFFKQEMELSLVGLQNAGKTSLVNSIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQRRFRTMWERYCRGVTAIV

AT5G67560.1 ADP-ribosylation factor-like A1D

3.4e-43

86.96

Show/hide

Query:  MGFFDSILNWLRSLFFKQEMELSLVGLQNAGKTSLVNSIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQRRFRTMWERYCRGVTAIV
        MG +D++LNWLRSLFFKQEMELSL+GLQNAGKTSLVN +ATGGYSEDMIPTVGFNMRKVTKG+VTIKLWDLGGQ RFR+MWERYCR V+AIV
Subjt:  MGFFDSILNWLRSLFFKQEMELSLVGLQNAGKTSLVNSIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQRRFRTMWERYCRGVTAIV

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGGTTTTTTCGATTCCATCCTCAATTGGCTCAGGAGCCTGTTCTTCAAACAGGAAATGGAGCTTTCACTTGTAGGCCTCCAGAATGCTGGGAAGACATCTCTTGTCAA
TTCTATTGCTACAGGGGGCTACAGTGAGGATATGATTCCAACTGTCGGGTTTAACATGCGGAAAGTTACCAAGGGCAATGTAACAATTAAACTTTGGGACCTTGGAGGGC
AGAGGAGATTCCGTACAATGTGGGAGAGATATTGCCGTGGCGTGACTGCAATTGTGTAA

mRNA sequence

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CTTCAGCTTTGGACAAGCGGACAGTACACGGATAGAACATTTTGGCCCTCGAGGTTTTCCTCGAAGAATGAGTTGCTCAAGTTTCTGTCTCTTCTTCTTCTCCATTACTC
ATCTCTTTCGTCTATGAATATTCCTTCTTTCCTAATAAACTTCCACAGTTTCCATTTCTTCAGCTCCTTTTGTTGATCAGTAATCAAGACTTCTTCACAGTTCCTTACAT
TTCCGGAAATGGGTTTTTTCGATTCCATCCTCAATTGGCTCAGGAGCCTGTTCTTCAAACAGGAAATGGAGCTTTCACTTGTAGGCCTCCAGAATGCTGGGAAGACATCT
CTTGTCAATTCTATTGCTACAGGGGGCTACAGTGAGGATATGATTCCAACTGTCGGGTTTAACATGCGGAAAGTTACCAAGGGCAATGTAACAATTAAACTTTGGGACCT
TGGAGGGCAGAGGAGATTCCGTACAATGTGGGAGAGATATTGCCGTGGCGTGACTGCAATTGTGTAA

Protein sequence

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MGFFDSILNWLRSLFFKQEMELSLVGLQNAGKTSLVNSIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQRRFRTMWERYCRGVTAIV

Lsi09G009190 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome