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Lsi09G009300 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi09G009300
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionpolcalcin Ole e 3
Genome locationchr09:11576812..11577066
RNA-Seq ExpressionLsi09G009300
SyntenyLsi09G009300
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004140303.1 polcalcin Ole e 3 [Cucumis sativus]2.0e-3696.43Show/hide
Query:  MADDPQDQAERDRIFKRFDANGDGKISASELGEALKTLGSVTADEVQRMMAEIDTDGDGFISYEEFTDFARANRGLVKDVAKIF
        MADDPQDQAER+RIFKRFDANGDGKIS++ELGEALKTLGSVTADEVQRMMAEIDTDGDGFISYEEFTDFARANRGLVKDVAKIF
Subjt:  MADDPQDQAERDRIFKRFDANGDGKISASELGEALKTLGSVTADEVQRMMAEIDTDGDGFISYEEFTDFARANRGLVKDVAKIF

XP_016902555.1 PREDICTED: polcalcin Ole e 3 [Cucumis melo]9.0e-3797.62Show/hide
Query:  MADDPQDQAERDRIFKRFDANGDGKISASELGEALKTLGSVTADEVQRMMAEIDTDGDGFISYEEFTDFARANRGLVKDVAKIF
        MADDPQDQAER+RIFKRFDANGDGKIS+SELGEALKTLGSVTADEVQRMMAEIDTDGDGFISYEEFTDFARANRGLVKDVAKIF
Subjt:  MADDPQDQAERDRIFKRFDANGDGKISASELGEALKTLGSVTADEVQRMMAEIDTDGDGFISYEEFTDFARANRGLVKDVAKIF

XP_022141635.1 polcalcin Bet v 4 [Momordica charantia]2.6e-3696.43Show/hide
Query:  MADDPQDQAERDRIFKRFDANGDGKISASELGEALKTLGSVTADEVQRMMAEIDTDGDGFISYEEFTDFARANRGLVKDVAKIF
        MADDPQD+ ERDRIFKRFDANGDGKISA+ELGEALKTLGSVTADEVQRMMAEIDTDGDGFISYEEFTDFARANRGLVKDVAKIF
Subjt:  MADDPQDQAERDRIFKRFDANGDGKISASELGEALKTLGSVTADEVQRMMAEIDTDGDGFISYEEFTDFARANRGLVKDVAKIF

XP_031392869.1 polcalcin Ole e 3 [Punica granatum]2.1e-3389.29Show/hide
Query:  MADDPQDQAERDRIFKRFDANGDGKISASELGEALKTLGSVTADEVQRMMAEIDTDGDGFISYEEFTDFARANRGLVKDVAKIF
        MADDPQ+ AER+RIFKRFDANGDGKIS++ELG+ALKTLGSVTA+EVQRMMAEIDTDGDGFIS+EEFTDFARANRGL+KDVAKIF
Subjt:  MADDPQDQAERDRIFKRFDANGDGKISASELGEALKTLGSVTADEVQRMMAEIDTDGDGFISYEEFTDFARANRGLVKDVAKIF

XP_038875780.1 polcalcin Ole e 3 [Benincasa hispida]4.0e-3798.81Show/hide
Query:  MADDPQDQAERDRIFKRFDANGDGKISASELGEALKTLGSVTADEVQRMMAEIDTDGDGFISYEEFTDFARANRGLVKDVAKIF
        MADDPQDQAER+RIFKRFDANGDGKISASELGEALKTLGSVTADEVQRMMAEIDTDGDGFISYEEFTDFARANRGLVKDVAKIF
Subjt:  MADDPQDQAERDRIFKRFDANGDGKISASELGEALKTLGSVTADEVQRMMAEIDTDGDGFISYEEFTDFARANRGLVKDVAKIF

TrEMBL top hitse value%identityAlignment
A0A0A0KQB8 Uncharacterized protein9.7e-3796.43Show/hide
Query:  MADDPQDQAERDRIFKRFDANGDGKISASELGEALKTLGSVTADEVQRMMAEIDTDGDGFISYEEFTDFARANRGLVKDVAKIF
        MADDPQDQAER+RIFKRFDANGDGKIS++ELGEALKTLGSVTADEVQRMMAEIDTDGDGFISYEEFTDFARANRGLVKDVAKIF
Subjt:  MADDPQDQAERDRIFKRFDANGDGKISASELGEALKTLGSVTADEVQRMMAEIDTDGDGFISYEEFTDFARANRGLVKDVAKIF

A0A1S4E3J8 polcalcin Ole e 34.4e-3797.62Show/hide
Query:  MADDPQDQAERDRIFKRFDANGDGKISASELGEALKTLGSVTADEVQRMMAEIDTDGDGFISYEEFTDFARANRGLVKDVAKIF
        MADDPQDQAER+RIFKRFDANGDGKIS+SELGEALKTLGSVTADEVQRMMAEIDTDGDGFISYEEFTDFARANRGLVKDVAKIF
Subjt:  MADDPQDQAERDRIFKRFDANGDGKISASELGEALKTLGSVTADEVQRMMAEIDTDGDGFISYEEFTDFARANRGLVKDVAKIF

A0A5A7V407 Polcalcin Ole e 34.4e-3797.62Show/hide
Query:  MADDPQDQAERDRIFKRFDANGDGKISASELGEALKTLGSVTADEVQRMMAEIDTDGDGFISYEEFTDFARANRGLVKDVAKIF
        MADDPQDQAER+RIFKRFDANGDGKIS+SELGEALKTLGSVTADEVQRMMAEIDTDGDGFISYEEFTDFARANRGLVKDVAKIF
Subjt:  MADDPQDQAERDRIFKRFDANGDGKISASELGEALKTLGSVTADEVQRMMAEIDTDGDGFISYEEFTDFARANRGLVKDVAKIF

A0A6J1CIN1 polcalcin Bet v 41.3e-3696.43Show/hide
Query:  MADDPQDQAERDRIFKRFDANGDGKISASELGEALKTLGSVTADEVQRMMAEIDTDGDGFISYEEFTDFARANRGLVKDVAKIF
        MADDPQD+ ERDRIFKRFDANGDGKISA+ELGEALKTLGSVTADEVQRMMAEIDTDGDGFISYEEFTDFARANRGLVKDVAKIF
Subjt:  MADDPQDQAERDRIFKRFDANGDGKISASELGEALKTLGSVTADEVQRMMAEIDTDGDGFISYEEFTDFARANRGLVKDVAKIF

A0A7N0TTI6 Uncharacterized protein7.7e-3489.29Show/hide
Query:  MADDPQDQAERDRIFKRFDANGDGKISASELGEALKTLGSVTADEVQRMMAEIDTDGDGFISYEEFTDFARANRGLVKDVAKIF
        MADD QDQAER+RIFKRFDANGDGKIS+SELGEALK+LGSVTADEVQRMM EIDTDGDGFISY+EFT+FA+ANRGLVKDVAK+F
Subjt:  MADDPQDQAERDRIFKRFDANGDGKISASELGEALKTLGSVTADEVQRMMAEIDTDGDGFISYEEFTDFARANRGLVKDVAKIF

SwissProt top hitse value%identityAlignment
O81092 Polcalcin Ole e 31.1e-3486.9Show/hide
Query:  MADDPQDQAERDRIFKRFDANGDGKISASELGEALKTLGSVTADEVQRMMAEIDTDGDGFISYEEFTDFARANRGLVKDVAKIF
        MADDPQ+ AE +RIFKRFDANGDGKIS+SELGE LKTLGSVT +E+QRMMAEIDTDGDGFIS+EEFT FARANRGLVKDVAKIF
Subjt:  MADDPQDQAERDRIFKRFDANGDGKISASELGEALKTLGSVTADEVQRMMAEIDTDGDGFISYEEFTDFARANRGLVKDVAKIF

O81701 Polcalcin Aln g 49.7e-3487.06Show/hide
Query:  MADD-PQDQAERDRIFKRFDANGDGKISASELGEALKTLGSVTADEVQRMMAEIDTDGDGFISYEEFTDFARANRGLVKDVAKIF
        MADD PQDQAE +RIFK FDANGDGKISASELG+ALKTLGSVT DEV+ MMAEIDTDGDGFIS++EFT+FARANRGLVKDVAKIF
Subjt:  MADD-PQDQAERDRIFKRFDANGDGKISASELGEALKTLGSVTADEVQRMMAEIDTDGDGFISYEEFTDFARANRGLVKDVAKIF

Q39419 Polcalcin Bet v 42.0e-3485.88Show/hide
Query:  MADD-PQDQAERDRIFKRFDANGDGKISASELGEALKTLGSVTADEVQRMMAEIDTDGDGFISYEEFTDFARANRGLVKDVAKIF
        MADD PQD+AER+RIFKRFDANGDGKISA+ELGEALKTLGS+T DEV+ MMAEIDTDGDGFIS++EFTDF RANRGL+KDVAKIF
Subjt:  MADD-PQDQAERDRIFKRFDANGDGKISASELGEALKTLGSVTADEVQRMMAEIDTDGDGFISYEEFTDFARANRGLVKDVAKIF

Q84V36 Polcalcin Che a 32.2e-3385.37Show/hide
Query:  DDPQDQAERDRIFKRFDANGDGKISASELGEALKTLGSVTADEVQRMMAEIDTDGDGFISYEEFTDFARANRGLVKDVAKIF
        D PQD A+R+RIFKRFD NGDGKIS+SELG+ALKTLGSVT DEV+RMMAEIDTDGDGFIS++EFTDFARANRGLVKDV+KIF
Subjt:  DDPQDQAERDRIFKRFDANGDGKISASELGEALKTLGSVTADEVQRMMAEIDTDGDGFISYEEFTDFARANRGLVKDVAKIF

Q8VWY6 Polcalcin Nic t 18.2e-3379.76Show/hide
Query:  MADDPQDQAERDRIFKRFDANGDGKISASELGEALKTLGSVTADEVQRMMAEIDTDGDGFISYEEFTDFARANRGLVKDVAKIF
        MA+DPQD A+R+RIFKRFD NGDGKIS++ELGE LK LGSVT++EVQ MMAE+DTDGDGFISYEEF +FARANRGL+KDVAK+F
Subjt:  MADDPQDQAERDRIFKRFDANGDGKISASELGEALKTLGSVTADEVQRMMAEIDTDGDGFISYEEFTDFARANRGLVKDVAKIF

Arabidopsis top hitse value%identityAlignment
AT1G18210.1 Calcium-binding EF-hand family protein1.5e-1043.66Show/hide
Query:  DPQDQAERDRIFKRFDANGDGKISASELGEALKTLG-SVTADEVQRMMAEIDTDGDGFISYEEFTDFARAN
        D  +  E  ++F +FD+NGDGKIS  ELG   K +G S T  E+ R++ E+DTD DG+I+ +EF+   R++
Subjt:  DPQDQAERDRIFKRFDANGDGKISASELGEALKTLG-SVTADEVQRMMAEIDTDGDGFISYEEFTDFARAN

AT1G24620.1 EF hand calcium-binding protein family1.2e-1048.33Show/hide
Query:  ERDRIFKRFDANGDGKISASELGEALKTLG-SVTADEVQRMMAEIDTDGDGFISYEEFTD
        E + +FK+FD NGDGKIS+ ELG  + +LG  V  +E+++ + EID  GDG+I++EEF +
Subjt:  ERDRIFKRFDANGDGKISASELGEALKTLG-SVTADEVQRMMAEIDTDGDGFISYEEFTD

AT1G73630.1 EF hand calcium-binding protein family3.3e-1348Show/hide
Query:  PQDQAERDRIFKRFDANGDGKISASELGEALKTLG-SVTADEVQRMMAEIDTDGDGFISYEEFTDFARANRGLVK
        P    E  ++F +FDANGDGKIS SELG   K++G S T +E+ R++ EID D DGFI+ EEF    R++   V+
Subjt:  PQDQAERDRIFKRFDANGDGKISASELGEALKTLG-SVTADEVQRMMAEIDTDGDGFISYEEFTDFARANRGLVK

AT3G03430.1 Calcium-binding EF-hand family protein1.0e-3076.54Show/hide
Query:  DPQDQAERDRIFKRFDANGDGKISASELGEALKTLGSVTADEVQRMMAEIDTDGDGFISYEEFTDFARANRGLVKDVAKIF
        D  ++AE DRIFK+FDANGDGKISA+ELG+ALK LGSVT ++++RMMAEIDTDGDG+ISY+EF DFA ANRGL+KDVAKIF
Subjt:  DPQDQAERDRIFKRFDANGDGKISASELGEALKTLGSVTADEVQRMMAEIDTDGDGFISYEEFTDFARANRGLVKDVAKIF

AT5G17480.1 pollen calcium-binding protein 17.1e-3282.72Show/hide
Query:  DPQDQAERDRIFKRFDANGDGKISASELGEALKTLGSVTADEVQRMMAEIDTDGDGFISYEEFTDFARANRGLVKDVAKIF
        D  ++AE DRIFK+FDANGDGKISA+EL EALKTLGSVTAD+V+RMMAEIDTDGDG ISY+EFTDFA ANRGL+KDVAKIF
Subjt:  DPQDQAERDRIFKRFDANGDGKISASELGEALKTLGSVTADEVQRMMAEIDTDGDGFISYEEFTDFARANRGLVKDVAKIF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGATGATCCTCAAGACCAAGCTGAACGTGACCGCATTTTCAAGCGCTTCGACGCCAATGGCGACGGTAAGATCTCTGCATCCGAGCTCGGGGAAGCCTTGAAGAC
GCTTGGCTCCGTCACCGCCGACGAAGTGCAGCGGATGATGGCCGAGATCGACACCGATGGCGACGGGTTCATTTCGTACGAAGAGTTCACAGATTTCGCCCGCGCTAACC
GTGGATTAGTCAAGGATGTTGCAAAGATATTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTGATGATCCTCAAGACCAAGCTGAACGTGACCGCATTTTCAAGCGCTTCGACGCCAATGGCGACGGTAAGATCTCTGCATCCGAGCTCGGGGAAGCCTTGAAGAC
GCTTGGCTCCGTCACCGCCGACGAAGTGCAGCGGATGATGGCCGAGATCGACACCGATGGCGACGGGTTCATTTCGTACGAAGAGTTCACAGATTTCGCCCGCGCTAACC
GTGGATTAGTCAAGGATGTTGCAAAGATATTCTAA
Protein sequenceShow/hide protein sequence
MADDPQDQAERDRIFKRFDANGDGKISASELGEALKTLGSVTADEVQRMMAEIDTDGDGFISYEEFTDFARANRGLVKDVAKIF