; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi09G009330 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi09G009330
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionBHLH domain-containing protein
Genome locationchr09:11651483..11653793
RNA-Seq ExpressionLsi09G009330
SyntenyLsi09G009330
Gene Ontology termsGO:0006357 - regulation of transcription by RNA polymerase II (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000978 - RNA polymerase II proximal promoter sequence-specific DNA binding (molecular function)
GO:0000981 - DNA-binding transcription factor activity, RNA polymerase II-specific (molecular function)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0062337.1 putative transcription factor bHLH086 [Cucumis melo var. makuwa]8.1e-10875.95Show/hide
Query:  MALANSAIQEVDDMEKN-GGYLKTLAIGKGH-ENPNGNFVFRNTTNYQLE-QQQQSLINFKCGIDHTILGHKMNNESLLSFEAQGICQLDQTYTWDDEQR
        M+LANSAIQEVD MEKN GGYLK+LAIGKGH +NPNG+FVFR+ TNYQL  QQQQSLINF         G KMNNESLLSFEAQGICQLD TY WDD++R
Subjt:  MALANSAIQEVDDMEKN-GGYLKTLAIGKGH-ENPNGNFVFRNTTNYQLE-QQQQSLINFKCGIDHTILGHKMNNESLLSFEAQGICQLDQTYTWDDEQR

Query:  VMEDPNCFQTATNHNNYSPPKDHHNKNGDHNGSVYEWLYSETTTDFSDAIQDAEATQEIIVNHKRSH-TGDSSGSVCKKQCTVTAKKQKLKSSTAKDPQS
        VMEDPNCFQTAT+HNNYSP KDHH+    ++GSVYEWLY E+TTDFSD+IQDAE TQEI+ NHKRSH TG+SSGSVCKKQCT   KKQK KS+TAKDPQS
Subjt:  VMEDPNCFQTATNHNNYSPPKDHHNKNGDHNGSVYEWLYSETTTDFSDAIQDAEATQEIIVNHKRSH-TGDSSGSVCKKQCTVTAKKQKLKSSTAKDPQS

Query:  IAA----------------------KVDLVTMLEKAISYVKFLQLQVKILATDEFWPVQGGKAPDISQVKEAIDVILSSQRERSSSSNSEK
        IAA                      KVDLVTMLEKAISYVKFLQLQVKILATDEFWPVQGGKAPDISQVKEAIDVILSSQRERSSSSN+EK
Subjt:  IAA----------------------KVDLVTMLEKAISYVKFLQLQVKILATDEFWPVQGGKAPDISQVKEAIDVILSSQRERSSSSNSEK

XP_004140364.1 putative transcription factor bHLH086 isoform X1 [Cucumis sativus]1.9e-11279.25Show/hide
Query:  MALANSAIQEVDDMEKN-GGYLKTLAIGKG--HENPNGNFVFRNTTNYQL-EQQQQSLINFKCGIDHTILGHKMNNESLLSFEAQGICQLDQTYTWDDEQ
        MALANSAIQEVD MEKN GGYLK+LAIGKG  H+NPNG+FVFR+TTNYQL +QQQQSLINF         GHKMNNESLLSFEAQGICQLD TY WDD+Q
Subjt:  MALANSAIQEVDDMEKN-GGYLKTLAIGKG--HENPNGNFVFRNTTNYQL-EQQQQSLINFKCGIDHTILGHKMNNESLLSFEAQGICQLDQTYTWDDEQ

Query:  RVMEDPNCFQTATNHNNYSPPKD--HHNKNGDHNGSVYEWLYSETTTDFSDAIQDAEATQEIIVNHKRSH-TGDSSGSVCKKQCTVTAKKQKLKSSTAKD
        RVMEDPNCFQTATNHNNYSP KD  HHNKNGD NGSVYEWLYSE+TTDFSD+IQ+AE TQEI+ NHKRSH TG+SSGSVCKKQCT   KKQK KS+TAKD
Subjt:  RVMEDPNCFQTATNHNNYSPPKD--HHNKNGDHNGSVYEWLYSETTTDFSDAIQDAEATQEIIVNHKRSH-TGDSSGSVCKKQCTVTAKKQKLKSSTAKD

Query:  PQSIAA----------------------KVDLVTMLEKAISYVKFLQLQVKILATDEFWPVQGGKAPDISQVKEAIDVILSSQRERSSSSNSEK
        PQSIAA                      KVDLVTMLEKAISYVKFLQLQVKILATDEFWPVQGGKAPDISQVKEAIDVILSSQRERSSSSNSEK
Subjt:  PQSIAA----------------------KVDLVTMLEKAISYVKFLQLQVKILATDEFWPVQGGKAPDISQVKEAIDVILSSQRERSSSSNSEK

XP_008460515.1 PREDICTED: putative transcription factor bHLH086 [Cucumis melo]9.6e-10976.29Show/hide
Query:  MALANSAIQEVDDMEKN-GGYLKTLAIGKGH-ENPNGNFVFRNTTNYQLE-QQQQSLINFKCGIDHTILGHKMNNESLLSFEAQGICQLDQTYTWDDEQR
        M+LANSAIQEVD MEKN GGYLK+LAIGKGH +NPNG+FVFR+ TNYQL  QQQQSLINF         GHKMNNESLLSFEAQGICQLD TY WDD++R
Subjt:  MALANSAIQEVDDMEKN-GGYLKTLAIGKGH-ENPNGNFVFRNTTNYQLE-QQQQSLINFKCGIDHTILGHKMNNESLLSFEAQGICQLDQTYTWDDEQR

Query:  VMEDPNCFQTATNHNNYSPPKDHHNKNGDHNGSVYEWLYSETTTDFSDAIQDAEATQEIIVNHKRSH-TGDSSGSVCKKQCTVTAKKQKLKSSTAKDPQS
        VMEDPNCFQTAT+HNNYSP KDHH+    ++GSVYEWLY E+TTDFSD+IQDAE TQEI+ NHKRSH TG+SSGSVCKKQCT   KKQK KS+TAKDPQS
Subjt:  VMEDPNCFQTATNHNNYSPPKDHHNKNGDHNGSVYEWLYSETTTDFSDAIQDAEATQEIIVNHKRSH-TGDSSGSVCKKQCTVTAKKQKLKSSTAKDPQS

Query:  IAA----------------------KVDLVTMLEKAISYVKFLQLQVKILATDEFWPVQGGKAPDISQVKEAIDVILSSQRERSSSSNSEK
        IAA                      KVDLVTMLEKAISYVKFLQLQVKILATDEFWPVQGGKAPDISQVKEAIDVILSSQRERSSSSN+EK
Subjt:  IAA----------------------KVDLVTMLEKAISYVKFLQLQVKILATDEFWPVQGGKAPDISQVKEAIDVILSSQRERSSSSNSEK

XP_031741132.1 putative transcription factor bHLH086 isoform X2 [Cucumis sativus]3.5e-10378.62Show/hide
Query:  MALANSAIQEVDDMEKN-GGYLKTLAIGKG--HENPNGNFVFRNTTNYQL-EQQQQSLINFKCGIDHTILGHKMNNESLLSFEAQGICQLDQTYTWDDEQ
        MALANSAIQEVD MEKN GGYLK+LAIGKG  H+NPNG+FVFR+TTNYQL +QQQQSLINF         GHKMNNESLLSFEAQGICQLD TY WDD+Q
Subjt:  MALANSAIQEVDDMEKN-GGYLKTLAIGKG--HENPNGNFVFRNTTNYQL-EQQQQSLINFKCGIDHTILGHKMNNESLLSFEAQGICQLDQTYTWDDEQ

Query:  RVMEDPNCFQTATNHNNYSPPKD--HHNKNGDHNGSVYEWLYSETTTDFSDAIQDAEATQEIIVNHKRSH-TGDSSGSVCKKQCTVTAKKQKLKSSTAKD
        RVMEDPNCFQTATNHNNYSP KD  HHNKNGD NGSVYEWLYSE+TTDFSD+IQ+AE TQEI+ NHKRSH TG+SSGSVCKKQCT   KKQK KS+TAKD
Subjt:  RVMEDPNCFQTATNHNNYSPPKD--HHNKNGDHNGSVYEWLYSETTTDFSDAIQDAEATQEIIVNHKRSH-TGDSSGSVCKKQCTVTAKKQKLKSSTAKD

Query:  PQSIAAKVDLVTMLEKAISYVKFLQLQV----KILATDEFWPVQGGKAPDISQVKEAIDVILSSQRERSSSSNSEK
        PQSIAAK       E+    +K LQ  V    KILATDEFWPVQGGKAPDISQVKEAIDVILSSQRERSSSSNSEK
Subjt:  PQSIAAKVDLVTMLEKAISYVKFLQLQV----KILATDEFWPVQGGKAPDISQVKEAIDVILSSQRERSSSSNSEK

XP_038907041.1 putative transcription factor bHLH086 [Benincasa hispida]1.5e-12582.25Show/hide
Query:  MALANSAIQEVDDMEKNGGYLKTLAIGKGHENPNGNFVFRNTTNYQL------EQQQQSLINFKCGIDHTILGHKMNNESLLSFEAQGICQLDQTYTWDD
        MAL NSA+QEVD MEKNGGYLKTLA GKGHENP+GNFVFRNTTNYQL      +QQQQSLINFKCGI++TILGHKMN+ESLLSFEAQGICQLD TY WDD
Subjt:  MALANSAIQEVDDMEKNGGYLKTLAIGKGHENPNGNFVFRNTTNYQL------EQQQQSLINFKCGIDHTILGHKMNNESLLSFEAQGICQLDQTYTWDD

Query:  EQRVMEDPNCFQTATNHNNYSPPKDHHNKNGDHNGSVYEWLYSETTTDFSDAIQDAEATQEIIVNHKRSHTGDSSGSVCKKQCTVTAKKQKLKSSTAKDP
        +QRVMEDPNCFQTATNHNNYSP KDHHNKNGD NGSVYEWLYSE TTDFSDAIQ+AEATQ+II+NHKRSHTG+SSGSVCKKQCT  AKKQK KS T KDP
Subjt:  EQRVMEDPNCFQTATNHNNYSPPKDHHNKNGDHNGSVYEWLYSETTTDFSDAIQDAEATQEIIVNHKRSHTGDSSGSVCKKQCTVTAKKQKLKSSTAKDP

Query:  QSIAA----------------------KVDLVTMLEKAISYVKFLQLQVKILATDEFWPVQGGKAPDISQVKEAIDVILSSQRERSSSSNSEK
        QSIAA                      KVDLVTMLEKAISYVKFLQLQVKILATDEFWPVQGGKAPDISQVKEAIDVILSSQRERSSSSNSEK
Subjt:  QSIAA----------------------KVDLVTMLEKAISYVKFLQLQVKILATDEFWPVQGGKAPDISQVKEAIDVILSSQRERSSSSNSEK

TrEMBL top hitse value%identityAlignment
A0A0A0KN55 BHLH domain-containing protein9.0e-11379.25Show/hide
Query:  MALANSAIQEVDDMEKN-GGYLKTLAIGKG--HENPNGNFVFRNTTNYQL-EQQQQSLINFKCGIDHTILGHKMNNESLLSFEAQGICQLDQTYTWDDEQ
        MALANSAIQEVD MEKN GGYLK+LAIGKG  H+NPNG+FVFR+TTNYQL +QQQQSLINF         GHKMNNESLLSFEAQGICQLD TY WDD+Q
Subjt:  MALANSAIQEVDDMEKN-GGYLKTLAIGKG--HENPNGNFVFRNTTNYQL-EQQQQSLINFKCGIDHTILGHKMNNESLLSFEAQGICQLDQTYTWDDEQ

Query:  RVMEDPNCFQTATNHNNYSPPKD--HHNKNGDHNGSVYEWLYSETTTDFSDAIQDAEATQEIIVNHKRSH-TGDSSGSVCKKQCTVTAKKQKLKSSTAKD
        RVMEDPNCFQTATNHNNYSP KD  HHNKNGD NGSVYEWLYSE+TTDFSD+IQ+AE TQEI+ NHKRSH TG+SSGSVCKKQCT   KKQK KS+TAKD
Subjt:  RVMEDPNCFQTATNHNNYSPPKD--HHNKNGDHNGSVYEWLYSETTTDFSDAIQDAEATQEIIVNHKRSH-TGDSSGSVCKKQCTVTAKKQKLKSSTAKD

Query:  PQSIAA----------------------KVDLVTMLEKAISYVKFLQLQVKILATDEFWPVQGGKAPDISQVKEAIDVILSSQRERSSSSNSEK
        PQSIAA                      KVDLVTMLEKAISYVKFLQLQVKILATDEFWPVQGGKAPDISQVKEAIDVILSSQRERSSSSNSEK
Subjt:  PQSIAA----------------------KVDLVTMLEKAISYVKFLQLQVKILATDEFWPVQGGKAPDISQVKEAIDVILSSQRERSSSSNSEK

A0A1S3CCR8 putative transcription factor bHLH0864.6e-10976.29Show/hide
Query:  MALANSAIQEVDDMEKN-GGYLKTLAIGKGH-ENPNGNFVFRNTTNYQLE-QQQQSLINFKCGIDHTILGHKMNNESLLSFEAQGICQLDQTYTWDDEQR
        M+LANSAIQEVD MEKN GGYLK+LAIGKGH +NPNG+FVFR+ TNYQL  QQQQSLINF         GHKMNNESLLSFEAQGICQLD TY WDD++R
Subjt:  MALANSAIQEVDDMEKN-GGYLKTLAIGKGH-ENPNGNFVFRNTTNYQLE-QQQQSLINFKCGIDHTILGHKMNNESLLSFEAQGICQLDQTYTWDDEQR

Query:  VMEDPNCFQTATNHNNYSPPKDHHNKNGDHNGSVYEWLYSETTTDFSDAIQDAEATQEIIVNHKRSH-TGDSSGSVCKKQCTVTAKKQKLKSSTAKDPQS
        VMEDPNCFQTAT+HNNYSP KDHH+    ++GSVYEWLY E+TTDFSD+IQDAE TQEI+ NHKRSH TG+SSGSVCKKQCT   KKQK KS+TAKDPQS
Subjt:  VMEDPNCFQTATNHNNYSPPKDHHNKNGDHNGSVYEWLYSETTTDFSDAIQDAEATQEIIVNHKRSH-TGDSSGSVCKKQCTVTAKKQKLKSSTAKDPQS

Query:  IAA----------------------KVDLVTMLEKAISYVKFLQLQVKILATDEFWPVQGGKAPDISQVKEAIDVILSSQRERSSSSNSEK
        IAA                      KVDLVTMLEKAISYVKFLQLQVKILATDEFWPVQGGKAPDISQVKEAIDVILSSQRERSSSSN+EK
Subjt:  IAA----------------------KVDLVTMLEKAISYVKFLQLQVKILATDEFWPVQGGKAPDISQVKEAIDVILSSQRERSSSSNSEK

A0A5A7V5W7 Putative transcription factor bHLH0863.9e-10875.95Show/hide
Query:  MALANSAIQEVDDMEKN-GGYLKTLAIGKGH-ENPNGNFVFRNTTNYQLE-QQQQSLINFKCGIDHTILGHKMNNESLLSFEAQGICQLDQTYTWDDEQR
        M+LANSAIQEVD MEKN GGYLK+LAIGKGH +NPNG+FVFR+ TNYQL  QQQQSLINF         G KMNNESLLSFEAQGICQLD TY WDD++R
Subjt:  MALANSAIQEVDDMEKN-GGYLKTLAIGKGH-ENPNGNFVFRNTTNYQLE-QQQQSLINFKCGIDHTILGHKMNNESLLSFEAQGICQLDQTYTWDDEQR

Query:  VMEDPNCFQTATNHNNYSPPKDHHNKNGDHNGSVYEWLYSETTTDFSDAIQDAEATQEIIVNHKRSH-TGDSSGSVCKKQCTVTAKKQKLKSSTAKDPQS
        VMEDPNCFQTAT+HNNYSP KDHH+    ++GSVYEWLY E+TTDFSD+IQDAE TQEI+ NHKRSH TG+SSGSVCKKQCT   KKQK KS+TAKDPQS
Subjt:  VMEDPNCFQTATNHNNYSPPKDHHNKNGDHNGSVYEWLYSETTTDFSDAIQDAEATQEIIVNHKRSH-TGDSSGSVCKKQCTVTAKKQKLKSSTAKDPQS

Query:  IAA----------------------KVDLVTMLEKAISYVKFLQLQVKILATDEFWPVQGGKAPDISQVKEAIDVILSSQRERSSSSNSEK
        IAA                      KVDLVTMLEKAISYVKFLQLQVKILATDEFWPVQGGKAPDISQVKEAIDVILSSQRERSSSSN+EK
Subjt:  IAA----------------------KVDLVTMLEKAISYVKFLQLQVKILATDEFWPVQGGKAPDISQVKEAIDVILSSQRERSSSSNSEK

A0A5D3DS91 Putative transcription factor1.1e-9975.46Show/hide
Query:  MALANSAIQEVDDMEKN-GGYLKTLAIGKGH-ENPNGNFVFRNTTNYQLE-QQQQSLINFKCGIDHTILGHKMNNESLLSFEAQGICQLDQTYTWDDEQR
        M+LANSAIQEVD MEKN GGYLK+LAIGKGH +NPNG+FVFR+ TNYQL  QQQQSLINF         GHKMNNESLLSFEAQGICQLD TY WDD++R
Subjt:  MALANSAIQEVDDMEKN-GGYLKTLAIGKGH-ENPNGNFVFRNTTNYQLE-QQQQSLINFKCGIDHTILGHKMNNESLLSFEAQGICQLDQTYTWDDEQR

Query:  VMEDPNCFQTATNHNNYSPPKDHHNKNGDHNGSVYEWLYSETTTDFSDAIQDAEATQEIIVNHKRSH-TGDSSGSVCKKQCTVTAKKQKLKSSTAKDPQS
        VMEDPNCFQTAT+HNNYSP KDHH+    ++GSVYEWLY E+TTDFSD+IQDAE TQEI+ NHKRSH TG+SSGSVCKKQCT   KKQK KS+TAKDPQS
Subjt:  VMEDPNCFQTATNHNNYSPPKDHHNKNGDHNGSVYEWLYSETTTDFSDAIQDAEATQEIIVNHKRSH-TGDSSGSVCKKQCTVTAKKQKLKSSTAKDPQS

Query:  IAAKVDLVTMLEKAISYVKFLQLQV----KILATDEFWPVQGGKAPDISQVKEAIDVILSSQRERSSSSNSEK
        IAAK       E+    +K LQ  V    KILATDEFWPVQGGKAPDISQVKEAIDVILSSQRERSSSSN+EK
Subjt:  IAAKVDLVTMLEKAISYVKFLQLQV----KILATDEFWPVQGGKAPDISQVKEAIDVILSSQRERSSSSNSEK

A0A6J1JPE9 putative transcription factor bHLH0863.8e-8767.46Show/hide
Query:  MALANSAIQEVDDMEKNGGYLKTLAIGKGHENPNGNFVFRNTTNYQLEQQQ-------QSLINFKCGIDHTILGHKMNNESLLSFEAQGICQLDQTYTWD
        MALANS++ E D M+K GGY+K+L I   H+ PN  F+FRNTTNYQL+  Q       QSLINFKCGID+  + HK NNESLLSFE QG+CQ   TY WD
Subjt:  MALANSAIQEVDDMEKNGGYLKTLAIGKGHENPNGNFVFRNTTNYQLEQQQ-------QSLINFKCGIDHTILGHKMNNESLLSFEAQGICQLDQTYTWD

Query:  DEQRVMEDPNCFQTATNHNNYSPPKDHHNKNGDHNGSVYEWLYSETTTDFSDAIQDAEATQEIIVNHKRSHTGDSSGSVCKKQCT-VTAKKQKLKSSTAK
        D QR+MEDPNCFQTAT  N YS PK+  NKNGD  GSVY+WLYSE  T  SD IQ+AE   E I N KR H G+SSGSV KKQCT   AKKQK KSSTAK
Subjt:  DEQRVMEDPNCFQTATNHNNYSPPKDHHNKNGDHNGSVYEWLYSETTTDFSDAIQDAEATQEIIVNHKRSHTGDSSGSVCKKQCT-VTAKKQKLKSSTAK

Query:  DPQSIAA----------------------KVDLVTMLEKAISYVKFLQLQVKILATDEFWPVQGGKAPDISQVKEAIDVILSSQRERSSSSNSEK
        DPQSIAA                      KVDLVTMLEKAISYVKFLQLQVKILATDEFWPVQGGKAPDISQVKEAID ILSSQRERSSSSNS+K
Subjt:  DPQSIAA----------------------KVDLVTMLEKAISYVKFLQLQVKILATDEFWPVQGGKAPDISQVKEAIDVILSSQRERSSSSNSEK

SwissProt top hitse value%identityAlignment
Q2QQ32 Transcription factor BHLH1331.7e-0467.74Show/hide
Query:  KVDLVTMLEKAISYVKFLQLQVKILATDEFW
        KVD+ TMLE+AI YVKFL LQ+K+L++DE W
Subjt:  KVDLVTMLEKAISYVKFLQLQVKILATDEFW

Q7XHI9 Transcription factor bHLH843.9e-0434.88Show/hide
Query:  QDAEATQEIIVNHKRSHTGDSSGSVCKKQCTVTAKKQKLKSSTAKDPQSI---AAKVDLVTMLEKAISYVKFLQLQVKILATDEFW
        +D E ++ + +N K   T  S G+    Q     K+++  +   +  Q +     KVD+ TMLE+A+ YVKFLQLQ+K+L++D+ W
Subjt:  QDAEATQEIIVNHKRSHTGDSSGSVCKKQCTVTAKKQKLKSSTAKDPQSI---AAKVDLVTMLEKAISYVKFLQLQVKILATDEFW

Q8LEG1 Transcription factor RSL31.7e-0430.61Show/hide
Query:  ETTTDFSD--AIQDAEATQEIIVNHKRSHTGDSSGSVCKKQCTVTAKKQKLKSSTAKDPQSI---AAKVDLVTMLEKAISYVKFLQLQVKILATDEFW
        E+ T++ D  ++ ++   ++  V   +  T  + G+    Q     K+++  +   K  Q++     KVD+ TMLE+A+ YVKFLQLQ+K+L++D+ W
Subjt:  ETTTDFSD--AIQDAEATQEIIVNHKRSHTGDSSGSVCKKQCTVTAKKQKLKSSTAKDPQSI---AAKVDLVTMLEKAISYVKFLQLQVKILATDEFW

Q9C707 Transcription factor RHD66.2e-2633.22Show/hide
Query:  MALANSAIQEVDDMEKNGGYLKTLAIGKGHENPN---------GNFVFRNTTNYQLEQQQQSLINFKCGIDHTILGHKMNNESLLSFEAQGICQLDQTYT
        MAL N    E + + K            G + P+         G     ++T     QQ Q  + +  G DH        + SL+ F        D   +
Subjt:  MALANSAIQEVDDMEKNGGYLKTLAIGKGHENPN---------GNFVFRNTTNYQLEQQQQSLINFKCGIDHTILGHKMNNESLLSFEAQGICQLDQTYT

Query:  WDDEQ------------RVMEDPNCFQTATNHNNYSPPKDHHNKNGDHNGSVYEWLYSETTTDFSDAIQDAEATQEIIVNHKRSHTGDSSGSVCKKQCTV
        +                  +E  N     TN N+         ++ +      +WLYS++T   + +  ++ + +     +KRSHTG+S+    K    V
Subjt:  WDDEQ------------RVMEDPNCFQTATNHNNYSPPKDHHNKNGDHNGSVYEWLYSETTTDFSDAIQDAEATQEIIVNHKRSHTGDSSGSVCKKQCTV

Query:  TAKKQKLKSSTAKDPQSIAA----------------------KVDLVTMLEKAISYVKFLQLQVKILATDEFWPVQGGKAPDISQVKEAIDVIL-SSQRE
        T K +   +++ KDPQS+AA                      KVDLVTMLEKAISYVKFLQ+QVK+LATDEFWP QGGKAPDISQVK+AID IL SSQR+
Subjt:  TAKKQKLKSSTAKDPQSIAA----------------------KVDLVTMLEKAISYVKFLQLQVKILATDEFWPVQGGKAPDISQVKEAIDVIL-SSQRE

Query:  RSSS
        R+S+
Subjt:  RSSS

Q9FJ00 Putative transcription factor bHLH0863.3e-2737.87Show/hide
Query:  IGKGHENPNGNFVFRNTTNYQLEQQQQSLINFKCGIDHTILGHKMNNESLLSFEAQGICQLDQTYTWDD---------EQRVMEDPNCFQTATN----HN
        I   H+N N  FVF    + +  +   SL++F      T   H+     + +  A  +   + +Y++D            RV++ PN F+T ++     N
Subjt:  IGKGHENPNGNFVFRNTTNYQLEQQQQSLINFKCGIDHTILGHKMNNESLLSFEAQGICQLDQTYTWDD---------EQRVMEDPNCFQTATN----HN

Query:  NYSPPKDHHNKNGDHNGSVYEWLYSETTTDFSDAIQDAEATQEIIVNHKRSHTGDSSGSVCKKQCTVTAKKQKLKSSTA-KDPQSIAA------------
        + S P  +H  NGD       WLYS +T    +     E+T   +  +KR  TG+++  + KK  + T  K K K++T+ KDPQS+AA            
Subjt:  NYSPPKDHHNKNGDHNGSVYEWLYSETTTDFSDAIQDAEATQEIIVNHKRSHTGDSSGSVCKKQCTVTAKKQKLKSSTA-KDPQSIAA------------

Query:  ----------KVDLVTMLEKAISYVKFLQLQVKILATDEFWPVQGGKAPDISQVKEAIDVILSSQRERSSSS
                  KVDLVTMLEKAI YVKFLQ+QVK+LA DEFWP QGGKAPDISQVKEAID ILSS +  S+S+
Subjt:  ----------KVDLVTMLEKAISYVKFLQLQVKILATDEFWPVQGGKAPDISQVKEAIDVILSSQRERSSSS

Arabidopsis top hitse value%identityAlignment
AT1G27740.1 root hair defective 6-like 41.2e-0530.61Show/hide
Query:  ETTTDFSD--AIQDAEATQEIIVNHKRSHTGDSSGSVCKKQCTVTAKKQKLKSSTAKDPQSI---AAKVDLVTMLEKAISYVKFLQLQVKILATDEFW
        E+ T++ D  ++ ++   ++  V   +  T  + G+    Q     K+++  +   K  Q++     KVD+ TMLE+A+ YVKFLQLQ+K+L++D+ W
Subjt:  ETTTDFSD--AIQDAEATQEIIVNHKRSHTGDSSGSVCKKQCTVTAKKQKLKSSTAKDPQSI---AAKVDLVTMLEKAISYVKFLQLQVKILATDEFW

AT1G66470.1 ROOT HAIR DEFECTIVE64.4e-2733.22Show/hide
Query:  MALANSAIQEVDDMEKNGGYLKTLAIGKGHENPN---------GNFVFRNTTNYQLEQQQQSLINFKCGIDHTILGHKMNNESLLSFEAQGICQLDQTYT
        MAL N    E + + K            G + P+         G     ++T     QQ Q  + +  G DH        + SL+ F        D   +
Subjt:  MALANSAIQEVDDMEKNGGYLKTLAIGKGHENPN---------GNFVFRNTTNYQLEQQQQSLINFKCGIDHTILGHKMNNESLLSFEAQGICQLDQTYT

Query:  WDDEQ------------RVMEDPNCFQTATNHNNYSPPKDHHNKNGDHNGSVYEWLYSETTTDFSDAIQDAEATQEIIVNHKRSHTGDSSGSVCKKQCTV
        +                  +E  N     TN N+         ++ +      +WLYS++T   + +  ++ + +     +KRSHTG+S+    K    V
Subjt:  WDDEQ------------RVMEDPNCFQTATNHNNYSPPKDHHNKNGDHNGSVYEWLYSETTTDFSDAIQDAEATQEIIVNHKRSHTGDSSGSVCKKQCTV

Query:  TAKKQKLKSSTAKDPQSIAA----------------------KVDLVTMLEKAISYVKFLQLQVKILATDEFWPVQGGKAPDISQVKEAIDVIL-SSQRE
        T K +   +++ KDPQS+AA                      KVDLVTMLEKAISYVKFLQ+QVK+LATDEFWP QGGKAPDISQVK+AID IL SSQR+
Subjt:  TAKKQKLKSSTAKDPQSIAA----------------------KVDLVTMLEKAISYVKFLQLQVKILATDEFWPVQGGKAPDISQVKEAIDVIL-SSQRE

Query:  RSSS
        R+S+
Subjt:  RSSS

AT2G14760.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein2.8e-0534.88Show/hide
Query:  QDAEATQEIIVNHKRSHTGDSSGSVCKKQCTVTAKKQKLKSSTAKDPQSI---AAKVDLVTMLEKAISYVKFLQLQVKILATDEFW
        +D E ++ + +N K   T  S G+    Q     K+++  +   +  Q +     KVD+ TMLE+A+ YVKFLQLQ+K+L++D+ W
Subjt:  QDAEATQEIIVNHKRSHTGDSSGSVCKKQCTVTAKKQKLKSSTAKDPQSI---AAKVDLVTMLEKAISYVKFLQLQVKILATDEFW

AT2G14760.3 basic helix-loop-helix (bHLH) DNA-binding superfamily protein6.2e-0540Show/hide
Query:  KKQCTVTAKKQKLKSSTAKDPQSI---AAKVDLVTMLEKAISYVKFLQLQVKILATDEFW
        K  C +  K+++  +   +  Q +     KVD+ TMLE+A+ YVKFLQLQ+K+L++D+ W
Subjt:  KKQCTVTAKKQKLKSSTAKDPQSI---AAKVDLVTMLEKAISYVKFLQLQVKILATDEFW

AT5G37800.1 RHD SIX-LIKE 12.3e-2837.87Show/hide
Query:  IGKGHENPNGNFVFRNTTNYQLEQQQQSLINFKCGIDHTILGHKMNNESLLSFEAQGICQLDQTYTWDD---------EQRVMEDPNCFQTATN----HN
        I   H+N N  FVF    + +  +   SL++F      T   H+     + +  A  +   + +Y++D            RV++ PN F+T ++     N
Subjt:  IGKGHENPNGNFVFRNTTNYQLEQQQQSLINFKCGIDHTILGHKMNNESLLSFEAQGICQLDQTYTWDD---------EQRVMEDPNCFQTATN----HN

Query:  NYSPPKDHHNKNGDHNGSVYEWLYSETTTDFSDAIQDAEATQEIIVNHKRSHTGDSSGSVCKKQCTVTAKKQKLKSSTA-KDPQSIAA------------
        + S P  +H  NGD       WLYS +T    +     E+T   +  +KR  TG+++  + KK  + T  K K K++T+ KDPQS+AA            
Subjt:  NYSPPKDHHNKNGDHNGSVYEWLYSETTTDFSDAIQDAEATQEIIVNHKRSHTGDSSGSVCKKQCTVTAKKQKLKSSTA-KDPQSIAA------------

Query:  ----------KVDLVTMLEKAISYVKFLQLQVKILATDEFWPVQGGKAPDISQVKEAIDVILSSQRERSSSS
                  KVDLVTMLEKAI YVKFLQ+QVK+LA DEFWP QGGKAPDISQVKEAID ILSS +  S+S+
Subjt:  ----------KVDLVTMLEKAISYVKFLQLQVKILATDEFWPVQGGKAPDISQVKEAIDVILSSQRERSSSS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCACTTGCAAATTCAGCCATACAAGAAGTGGATGACATGGAGAAAAATGGTGGATATTTGAAGACTTTAGCCATTGGAAAAGGCCACGAAAATCCAAACGGTAACTT
CGTGTTTCGAAACACGACGAATTACCAACTCGAACAACAACAACAATCTCTCATCAACTTCAAATGTGGGATTGACCATACTATTTTGGGTCATAAGATGAATAATGAAT
CTTTGTTGAGCTTTGAAGCACAAGGGATTTGTCAATTAGATCAGACTTATACTTGGGATGATGAGCAACGTGTGATGGAGGATCCAAATTGCTTTCAAACAGCTACCAAT
CATAATAATTACAGTCCTCCAAAAGATCACCATAATAAAAATGGAGATCATAATGGGTCTGTTTATGAGTGGCTTTATTCTGAAACAACTACTGATTTTTCTGATGCCAT
TCAAGATGCTGAAGCAACTCAAGAGATTATTGTCAATCACAAGCGATCCCATACGGGAGATAGCAGTGGGAGTGTTTGTAAGAAGCAATGTACTGTCACAGCTAAAAAAC
AGAAACTCAAATCATCAACAGCCAAGGATCCACAGAGCATTGCAGCCAAGGTTGATTTGGTAACCATGTTGGAGAAAGCAATTAGTTATGTGAAATTTCTTCAACTACAA
GTGAAGATCCTAGCAACGGATGAATTTTGGCCTGTTCAAGGTGGAAAAGCTCCAGATATTTCACAAGTAAAGGAAGCCATCGATGTCATTCTTTCATCTCAAAGAGAAAG
AAGCTCAAGCTCAAACAGTGAAAAGTGA
mRNA sequenceShow/hide mRNA sequence
AAAAAGTACGAGTGTTGTGTATCCTTTTGAGTACTTTTAAAGCCACTTCTTTCATTCTCTTCTCTTATTTTCTCTTTCAAATGGCACTTGCAAATTCAGCCATACAAGAA
GTGGATGACATGGAGAAAAATGGTGGATATTTGAAGACTTTAGCCATTGGAAAAGGCCACGAAAATCCAAACGGTAACTTCGTGTTTCGAAACACGACGAATTACCAACT
CGAACAACAACAACAATCTCTCATCAACTTCAAATGTGGGATTGACCATACTATTTTGGGTCATAAGATGAATAATGAATCTTTGTTGAGCTTTGAAGCACAAGGGATTT
GTCAATTAGATCAGACTTATACTTGGGATGATGAGCAACGTGTGATGGAGGATCCAAATTGCTTTCAAACAGCTACCAATCATAATAATTACAGTCCTCCAAAAGATCAC
CATAATAAAAATGGAGATCATAATGGGTCTGTTTATGAGTGGCTTTATTCTGAAACAACTACTGATTTTTCTGATGCCATTCAAGATGCTGAAGCAACTCAAGAGATTAT
TGTCAATCACAAGCGATCCCATACGGGAGATAGCAGTGGGAGTGTTTGTAAGAAGCAATGTACTGTCACAGCTAAAAAACAGAAACTCAAATCATCAACAGCCAAGGATC
CACAGAGCATTGCAGCCAAGGTTGATTTGGTAACCATGTTGGAGAAAGCAATTAGTTATGTGAAATTTCTTCAACTACAAGTGAAGATCCTAGCAACGGATGAATTTTGG
CCTGTTCAAGGTGGAAAAGCTCCAGATATTTCACAAGTAAAGGAAGCCATCGATGTCATTCTTTCATCTCAAAGAGAAAGAAGCTCAAGCTCAAACAGTGAAAAGTGAAA
AGTGATATGTTATTATTATTATTAATGTTGCCTTCTTGGTAGATAGAATTTATGACAACAATTTTATATACTTCTCAATAATACAAATTCCATGAATTAATAAAAATAAA
ATAAAAAAACCCTTTGATAACCAAGTTTTTGGTTTAAAGTTTTTG
Protein sequenceShow/hide protein sequence
MALANSAIQEVDDMEKNGGYLKTLAIGKGHENPNGNFVFRNTTNYQLEQQQQSLINFKCGIDHTILGHKMNNESLLSFEAQGICQLDQTYTWDDEQRVMEDPNCFQTATN
HNNYSPPKDHHNKNGDHNGSVYEWLYSETTTDFSDAIQDAEATQEIIVNHKRSHTGDSSGSVCKKQCTVTAKKQKLKSSTAKDPQSIAAKVDLVTMLEKAISYVKFLQLQ
VKILATDEFWPVQGGKAPDISQVKEAIDVILSSQRERSSSSNSEK