; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi09G009460 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi09G009460
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionCENP-V/GFA domain-containing protein
Genome locationchr09:12101663..12103003
RNA-Seq ExpressionLsi09G009460
SyntenyLsi09G009460
Gene Ontology termsGO:0016846 - carbon-sulfur lyase activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR006913 - CENP-V/GFA domain
IPR011057 - Mss4-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0062377.1 centromere protein V isoform X5 [Cucumis melo var. makuwa]2.7e-6088.52Show/hide
Query:  MVVHRGGCHCKRIRWEVEAASSVTAWDCNCSDCSMRGNTHFTVPSQHFKLLGNSDKFTSTYTFGTHIAKHTFCKVCGITSFYHSRSTPDGVSVSFRCVDP
        MVVH GGCHCKRIRWEVEAASSV AWDCNCS+CSMRGNTHFTVPS+HF LLG+S  F STYTFGTH AKHTFCKVCGITSFYHSRSTPDGVSVSFRCVDP
Subjt:  MVVHRGGCHCKRIRWEVEAASSVTAWDCNCSDCSMRGNTHFTVPSQHFKLLGNSDKFTSTYTFGTHIAKHTFCKVCGITSFYHSRSTPDGVSVSFRCVDP

Query:  GTLNHVEINNFDGKNWEQAHHH
        GTLNHV+I  FDG+NWEQAHHH
Subjt:  GTLNHVEINNFDGKNWEQAHHH

KAE8648420.1 hypothetical protein Csa_007866 [Cucumis sativus]1.7e-5489.29Show/hide
Query:  MVVHRGGCHCKRIRWEVEAASSVTAWDCNCSDCSMRGNTHFTVPSQHFKLLGNSDKFTSTYTFGTHIAKHTFCKVCGITSFYHSRSTPDGVSVSFRCVDP
        MVVH GGCHCKRIRWEVEAASSV AWDCNCS+CSMRGNTHFTVPS+HFKLLG+SD F STYTFGTH AKHTFCKVCGITSFYHSRSTPDGVSVSFRCVDP
Subjt:  MVVHRGGCHCKRIRWEVEAASSVTAWDCNCSDCSMRGNTHFTVPSQHFKLLGNSDKFTSTYTFGTHIAKHTFCKVCGITSFYHSRSTPDGVSVSFRCVDP

Query:  GTLNHVEINNFD
        GTL+HV+I  FD
Subjt:  GTLNHVEINNFD

KAG6602043.1 Centromere protein V, partial [Cucurbita argyrosperma subsp. sororia]5.4e-5382.2Show/hide
Query:  ERRLLLKMMVVHRGGCHCKRIRWEVEAASSVTAWDCNCSDCSMRGNTHFTVPSQHFKLLGNSDKFTSTYTFGTHIAKHTFCKVCGITSFYHSRSTPDGVS
        ++R +   MV+H+GGCHCKRIRWEVEAA+SVTAW+CNCSDC MRGNTHFTVP+  FKLLG+SDKF STYTFGTHIA HTFCKVCGITSFYHSRSTPDGVS
Subjt:  ERRLLLKMMVVHRGGCHCKRIRWEVEAASSVTAWDCNCSDCSMRGNTHFTVPSQHFKLLGNSDKFTSTYTFGTHIAKHTFCKVCGITSFYHSRSTPDGVS

Query:  VSFRCVDPGTLNHVEINN
        V+FRCVDPGTL HVEI N
Subjt:  VSFRCVDPGTLNHVEINN

KAG7032737.1 Centromere protein V, partial [Cucurbita argyrosperma subsp. argyrosperma]2.5e-5885.83Show/hide
Query:  MVVHRGGCHCKRIRWEVEAASSVTAWDCNCSDCSMRGNTHFTVPSQHFKLLGNSDKFTSTYTFGTHIAKHTFCKVCGITSFYHSRSTPDGVSVSFRCVDP
        MV+H+GGCHCKRIRWEVEAA+SVTAW+CNCSDC MRGNTHFTVP+  FKLLG+SDKF STYTFGTHIA HTFCKVCGITSFYHSRSTPDGVSV+FRCVDP
Subjt:  MVVHRGGCHCKRIRWEVEAASSVTAWDCNCSDCSMRGNTHFTVPSQHFKLLGNSDKFTSTYTFGTHIAKHTFCKVCGITSFYHSRSTPDGVSVSFRCVDP

Query:  GTLNHVEINNFDGKNWEQAH
        GTL HVEI  FDG+NWE AH
Subjt:  GTLNHVEINNFDGKNWEQAH

XP_010062288.1 centromere protein V [Eucalyptus grandis]2.5e-5072.5Show/hide
Query:  MVVHRGGCHCKRIRWEVEAASSVTAWDCNCSDCSMRGNTHFTVPSQHFKLLGNSDKFTSTYTFGTHIAKHTFCKVCGITSFYHSRSTPDGVSVSFRCVDP
        +++H GGCHC+R+RWEVEA +SV AW CNCSDCSMRGN HF VPS+ FKLLGNSD++ +TYTFGTH AKHTFCKVCGITSFY  RS PDG++V++RCVDP
Subjt:  MVVHRGGCHCKRIRWEVEAASSVTAWDCNCSDCSMRGNTHFTVPSQHFKLLGNSDKFTSTYTFGTHIAKHTFCKVCGITSFYHSRSTPDGVSVSFRCVDP

Query:  GTLNHVEINNFDGKNWEQAH
        GTL HVEI  FDG+NWE ++
Subjt:  GTLNHVEINNFDGKNWEQAH

TrEMBL top hitse value%identityAlignment
A0A059BUT9 CENP-V/GFA domain-containing protein1.2e-5072.5Show/hide
Query:  MVVHRGGCHCKRIRWEVEAASSVTAWDCNCSDCSMRGNTHFTVPSQHFKLLGNSDKFTSTYTFGTHIAKHTFCKVCGITSFYHSRSTPDGVSVSFRCVDP
        +++H GGCHC+R+RWEVEA +SV AW CNCSDCSMRGN HF VPS+ FKLLGNSD++ +TYTFGTH AKHTFCKVCGITSFY  RS PDG++V++RCVDP
Subjt:  MVVHRGGCHCKRIRWEVEAASSVTAWDCNCSDCSMRGNTHFTVPSQHFKLLGNSDKFTSTYTFGTHIAKHTFCKVCGITSFYHSRSTPDGVSVSFRCVDP

Query:  GTLNHVEINNFDGKNWEQAH
        GTL HVEI  FDG+NWE ++
Subjt:  GTLNHVEINNFDGKNWEQAH

A0A0A0KN47 CENP-V/GFA domain-containing protein4.4e-6189.34Show/hide
Query:  MVVHRGGCHCKRIRWEVEAASSVTAWDCNCSDCSMRGNTHFTVPSQHFKLLGNSDKFTSTYTFGTHIAKHTFCKVCGITSFYHSRSTPDGVSVSFRCVDP
        MVVH GGCHCKRIRWEVEAASSV AWDCNCS+CSMRGNTHFTVPS+HFKLLG+SD F STYTFGTH AKHTFCKVCGITSFYHSRSTPDGVSVSFRCVDP
Subjt:  MVVHRGGCHCKRIRWEVEAASSVTAWDCNCSDCSMRGNTHFTVPSQHFKLLGNSDKFTSTYTFGTHIAKHTFCKVCGITSFYHSRSTPDGVSVSFRCVDP

Query:  GTLNHVEINNFDGKNWEQAHHH
        GTL+HV+I  FDG NWEQAHHH
Subjt:  GTLNHVEINNFDGKNWEQAHHH

A0A5A7V607 Centromere protein V isoform X51.3e-6088.52Show/hide
Query:  MVVHRGGCHCKRIRWEVEAASSVTAWDCNCSDCSMRGNTHFTVPSQHFKLLGNSDKFTSTYTFGTHIAKHTFCKVCGITSFYHSRSTPDGVSVSFRCVDP
        MVVH GGCHCKRIRWEVEAASSV AWDCNCS+CSMRGNTHFTVPS+HF LLG+S  F STYTFGTH AKHTFCKVCGITSFYHSRSTPDGVSVSFRCVDP
Subjt:  MVVHRGGCHCKRIRWEVEAASSVTAWDCNCSDCSMRGNTHFTVPSQHFKLLGNSDKFTSTYTFGTHIAKHTFCKVCGITSFYHSRSTPDGVSVSFRCVDP

Query:  GTLNHVEINNFDGKNWEQAHHH
        GTLNHV+I  FDG+NWEQAHHH
Subjt:  GTLNHVEINNFDGKNWEQAHHH

A0A6J1G4E1 centromere protein V-like1.6e-5072.95Show/hide
Query:  MVVHRGGCHCKRIRWEVEAASSVTAWDCNCSDCSMRGNTHFTVPSQHFKLLGNSDKFTSTYTFGTHIAKHTFCKVCGITSFYHSRSTPDGVSVSFRCVDP
        +VVH GGCHCK +RW VEA +SV AWDCNCSDC MR NTHF VP + FKLLG+S  F STYTFGTH AKHTFCKVCGITSFYH RS PDGV+++F+CVDP
Subjt:  MVVHRGGCHCKRIRWEVEAASSVTAWDCNCSDCSMRGNTHFTVPSQHFKLLGNSDKFTSTYTFGTHIAKHTFCKVCGITSFYHSRSTPDGVSVSFRCVDP

Query:  GTLNHVEINNFDGKNWEQAHHH
        GTL HVEI  FDG NWE ++ H
Subjt:  GTLNHVEINNFDGKNWEQAHHH

A0A7N2KY42 CENP-V/GFA domain-containing protein1.6e-5071.43Show/hide
Query:  VVHRGGCHCKRIRWEVEAASSVTAWDCNCSDCSMRGNTHFTVPSQHFKLLGNSDKFTSTYTFGTHIAKHTFCKVCGITSFYHSRSTPDGVSVSFRCVDPG
        VVH GGCHC+++RW V+A +S+ AWDCNCSDC MR NTHF VP++ F+LLG+S++F +TYTFGTH AKHTFCKVCGITSFY  RS PDGV+++FRCVDPG
Subjt:  VVHRGGCHCKRIRWEVEAASSVTAWDCNCSDCSMRGNTHFTVPSQHFKLLGNSDKFTSTYTFGTHIAKHTFCKVCGITSFYHSRSTPDGVSVSFRCVDPG

Query:  TLNHVEINNFDGKNWEQAH
        TL HVEI NFDG+NWE +H
Subjt:  TLNHVEINNFDGKNWEQAH

SwissProt top hitse value%identityAlignment
Q7Z7K6 Centromere protein V1.9e-2946.88Show/hide
Query:  MVVHRGGCHCKRIRWEVEAASSVTAWDCNCSDCSMRGNTHFTVPSQHFKLLGNSDKFTSTYTFGTHIAKHTFCKVCGITSFYHSRSTPDGVSVSFRCVDP
        +V H GGCHC  +R+EV A++ +  +DCNCS C  + N HF VP+  FKLL  ++  T TYTF TH A+HTFCK CG+ SFY  RS P G  ++  C+D 
Subjt:  MVVHRGGCHCKRIRWEVEAASSVTAWDCNCSDCSMRGNTHFTVPSQHFKLLGNSDKFTSTYTFGTHIAKHTFCKVCGITSFYHSRSTPDGVSVSFRCVDP

Query:  GTLNHVEINNFDGKNWEQAHHHHHPSKN
        GT+  +    F+G +WE+A   H   KN
Subjt:  GTLNHVEINNFDGKNWEQAHHHHHPSKN

Q9CXS4 Centromere protein V6.7e-3047.66Show/hide
Query:  MVVHRGGCHCKRIRWEVEAASSVTAWDCNCSDCSMRGNTHFTVPSQHFKLLGNSDKFTSTYTFGTHIAKHTFCKVCGITSFYHSRSTPDGVSVSFRCVDP
        +V H GGCHC  +R+EV A++ +  +DCNCS C  + N HF VP+  FKLL  ++  T TYTF TH A+HTFCK CG+ SFY  RS P G  ++  C+D 
Subjt:  MVVHRGGCHCKRIRWEVEAASSVTAWDCNCSDCSMRGNTHFTVPSQHFKLLGNSDKFTSTYTFGTHIAKHTFCKVCGITSFYHSRSTPDGVSVSFRCVDP

Query:  GTLNHVEINNFDGKNWEQAHHHHHPSKN
        GT+  V    F+G +WE+A   H   KN
Subjt:  GTLNHVEINNFDGKNWEQAHHHHHPSKN

Arabidopsis top hitse value%identityAlignment
AT5G16940.1 carbon-sulfur lyases9.5e-4865Show/hide
Query:  MVVHRGGCHCKRIRWEVEAASSVTAWDCNCSDCSMRGNTHFTVPSQHFKLLGNSDKFTSTYTFGTHIAKHTFCKVCGITSFYHSRSTPDGVSVSFRCVDP
        ++ H GGCHC +I+W V+AA SV AW CNCSDCSMRGN HF VPS +F+LL +S  F +TYTFGTH AKHTFCKVCGITSFY  RS PDGV+V+ +CV  
Subjt:  MVVHRGGCHCKRIRWEVEAASSVTAWDCNCSDCSMRGNTHFTVPSQHFKLLGNSDKFTSTYTFGTHIAKHTFCKVCGITSFYHSRSTPDGVSVSFRCVDP

Query:  GTLNHVEINNFDGKNWEQAH
        GTL H+E+ ++DG+NWE +H
Subjt:  GTLNHVEINNFDGKNWEQAH

AT5G16940.2 carbon-sulfur lyases9.5e-4865Show/hide
Query:  MVVHRGGCHCKRIRWEVEAASSVTAWDCNCSDCSMRGNTHFTVPSQHFKLLGNSDKFTSTYTFGTHIAKHTFCKVCGITSFYHSRSTPDGVSVSFRCVDP
        ++ H GGCHC +I+W V+AA SV AW CNCSDCSMRGN HF VPS +F+LL +S  F +TYTFGTH AKHTFCKVCGITSFY  RS PDGV+V+ +CV  
Subjt:  MVVHRGGCHCKRIRWEVEAASSVTAWDCNCSDCSMRGNTHFTVPSQHFKLLGNSDKFTSTYTFGTHIAKHTFCKVCGITSFYHSRSTPDGVSVSFRCVDP

Query:  GTLNHVEINNFDGKNWEQAH
        GTL H+E+ ++DG+NWE +H
Subjt:  GTLNHVEINNFDGKNWEQAH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAAGAGGGTAGTTGAAGAAAGGGGAGAGGAGAGGAGATTATTATTGAAGATGATGGTAGTCCACAGGGGTGGATGCCACTGCAAGAGAATAAGATGGGAAGTTGA
AGCAGCAAGCAGTGTCACAGCTTGGGATTGCAACTGTTCAGATTGCTCCATGAGAGGCAATACACATTTCACTGTGCCTTCTCAACATTTTAAGCTTTTGGGAAACTCAG
ATAAGTTTACTTCAACCTATACTTTTGGGACACATATTGCAAAGCATACATTTTGCAAAGTTTGTGGGATCACTTCCTTTTATCATTCACGCTCAACTCCAGATGGGGTT
TCAGTTAGTTTCAGGTGTGTTGATCCAGGCACGTTGAACCATGTTGAGATTAACAATTTTGATGGTAAAAATTGGGAGCAAGCTCATCATCATCATCATCCCTCAAAAAA
CTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCGAAGAGGGTAGTTGAAGAAAGGGGAGAGGAGAGGAGATTATTATTGAAGATGATGGTAGTCCACAGGGGTGGATGCCACTGCAAGAGAATAAGATGGGAAGTTGA
AGCAGCAAGCAGTGTCACAGCTTGGGATTGCAACTGTTCAGATTGCTCCATGAGAGGCAATACACATTTCACTGTGCCTTCTCAACATTTTAAGCTTTTGGGAAACTCAG
ATAAGTTTACTTCAACCTATACTTTTGGGACACATATTGCAAAGCATACATTTTGCAAAGTTTGTGGGATCACTTCCTTTTATCATTCACGCTCAACTCCAGATGGGGTT
TCAGTTAGTTTCAGGTGTGTTGATCCAGGCACGTTGAACCATGTTGAGATTAACAATTTTGATGGTAAAAATTGGGAGCAAGCTCATCATCATCATCATCCCTCAAAAAA
CTAG
Protein sequenceShow/hide protein sequence
MAKRVVEERGEERRLLLKMMVVHRGGCHCKRIRWEVEAASSVTAWDCNCSDCSMRGNTHFTVPSQHFKLLGNSDKFTSTYTFGTHIAKHTFCKVCGITSFYHSRSTPDGV
SVSFRCVDPGTLNHVEINNFDGKNWEQAHHHHHPSKN