; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi09G009510 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi09G009510
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionProtein FAF-like
Genome locationchr09:12324487..12325275
RNA-Seq ExpressionLsi09G009510
SyntenyLsi09G009510
Gene Ontology termsNA
InterPro domainsIPR021410 - The fantastic four family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0062387.1 protein FAF-like [Cucumis melo var. makuwa]3.9e-8666.67Show/hide
Query:  MQKQSQTPVVEEEAVPFSIS-GLKALISSEEDQENEGQLMEDRVIRSIGVGITRSNLLTHSSSSFCSIRSCNFLMDDLIGTESGVCLTSNSEEIEEKLPH
        +QK +Q   ++   +PFSIS GLK+LISS++      Q+ ED +I S+G+ I               IRSCNF MDDLIGTESGVCLTSNSEE+E    H
Subjt:  MQKQSQTPVVEEEAVPFSIS-GLKALISSEEDQENEGQLMEDRVIRSIGVGITRSNLLTHSSSSFCSIRSCNFLMDDLIGTESGVCLTSNSEEIEEKLPH

Query:  FDFDCRHYRTNRHDFT-------AKKQFPPPIPFVV--QAGHRPRSPWILTRYCSNRRLILKLERVTQHQSLESRRENGRLILNLVPIDDQD--LQYFIE
         DFDCR YRTNRH+F         KKQ+PPPIPF+    AG+RPRSPWILTRY SNRRLILKLERVTQHQSLESRRENGRLILNLVPI+D+   LQ+ IE
Subjt:  FDFDCRHYRTNRHDFT-------AKKQFPPPIPFVV--QAGHRPRSPWILTRYCSNRRLILKLERVTQHQSLESRRENGRLILNLVPIDDQD--LQYFIE

Query:  EDEGNEEIIESIECEGGEDEGTDSEIAFKSFTY-----GGAGGGGGGIMFCGVNGKFEERHVVHGHFGSAPLRPMGTVM
        E EG+EEI+ESIEC+GGEDEGTDSEI+FKS TY     GG GGGGGG+MFCGVNG FEERHVVHGH GSAPLRPMGTVM
Subjt:  EDEGNEEIIESIECEGGEDEGTDSEIAFKSFTY-----GGAGGGGGGIMFCGVNGKFEERHVVHGHFGSAPLRPMGTVM

KGN51022.1 hypothetical protein Csa_009233 [Cucumis sativus]2.8e-9267.01Show/hide
Query:  MQKQSQTPVVEEEAVPFSIS-GLKALISSEEDQENEGQLMEDRVIRSIGVGITRSNLLTHSSSS---------------FCSIRSCNFLMDDLIGTESGV
        +QK ++ P +    + FSIS GLK+LISS++      Q  ED VIRS+G+ I RSNLLTHSSSS               F SIRSCNF MDDLIGTESGV
Subjt:  MQKQSQTPVVEEEAVPFSIS-GLKALISSEEDQENEGQLMEDRVIRSIGVGITRSNLLTHSSSS---------------FCSIRSCNFLMDDLIGTESGV

Query:  CLTSNSEEIEEKLPHFDFDCRHYRTNRHDF-------TAKKQFPPPIPFVV--QAGHRPRSPWILTRYCSNRRLILKLERVTQHQSLESRRENGRLILNL
        CLTSNSEE+E    H DFDC +YRT+RH F         KKQFPPPIPF+    AG+RPRSPW+LTRY SNRRLILKLERVTQHQSLESRRENGRLILNL
Subjt:  CLTSNSEEIEEKLPHFDFDCRHYRTNRHDF-------TAKKQFPPPIPFVV--QAGHRPRSPWILTRYCSNRRLILKLERVTQHQSLESRRENGRLILNL

Query:  VPIDDQD---LQYFIEEDEGNEEIIESIECEGGEDEGTDSEIAFKSFTYGG-AGGGGGGIMFCGVNGKFEERHVVHGHFGSAPLRPMGTVM
        VPID++D    Q+ IEE EGNEEI+ESI+C+GGEDEGTDSEI+ +S+TYGG  GGGGGG+ FCG NG FEERHVVHGHFGSAPLRPMGTVM
Subjt:  VPIDDQD---LQYFIEEDEGNEEIIESIECEGGEDEGTDSEIAFKSFTYGG-AGGGGGGIMFCGVNGKFEERHVVHGHFGSAPLRPMGTVM

XP_016902558.1 PREDICTED: uncharacterized protein LOC103499299 [Cucumis melo]1.9e-7775.6Show/hide
Query:  MDDLIGTESGVCLTSNSEEIEEKLPHFDFDCRHYRTNRHDFT-------AKKQFPPPIPFVV--QAGHRPRSPWILTRYCSNRRLILKLERVTQHQSLES
        MDDLIGTESGVCLTSNSEE+E    H DFDCR YRTNRH+F         KKQ+PPPIPF+    AG+RPRSPWILTRY SNRRLILKLERVTQHQSLES
Subjt:  MDDLIGTESGVCLTSNSEEIEEKLPHFDFDCRHYRTNRHDFT-------AKKQFPPPIPFVV--QAGHRPRSPWILTRYCSNRRLILKLERVTQHQSLES

Query:  RRENGRLILNLVPIDDQD--LQYFIEEDEGNEEIIESIECEGGEDEGTDSEIAFKSFTY---------GGAGGGGGGIMFCGVNGKFEERHVVHGHFGSA
        RRENGRLILNLVPI+D+   LQ+ IEE EG+EEI+ESIEC+GGEDEGTDSEI+FKS TY         GG GGGGGG+MFCGVNG FEERHVVHGH GSA
Subjt:  RRENGRLILNLVPIDDQD--LQYFIEEDEGNEEIIESIECEGGEDEGTDSEIAFKSFTY---------GGAGGGGGGIMFCGVNGKFEERHVVHGHFGSA

Query:  PLRPMGTVM
        PLRPMGTVM
Subjt:  PLRPMGTVM

XP_023551345.1 uncharacterized protein LOC111809192 [Cucurbita pepo subsp. pepo]6.2e-7663.89Show/hide
Query:  MQKQSQTPVVEEEAVPFSISGLKALISSEEDQENEGQLMEDRVIRSIGVGITRSNLLT---------HSSSSFCSIRSCNFLMDDLIGTESGVCLTSNSE
        M  Q Q PVV  EAV FSISGLKALISSEE+ +  GQ  EDRVIRS G+GI  S LLT          SSSS  SI SCN LMDDLIGTESGV LT N+E
Subjt:  MQKQSQTPVVEEEAVPFSISGLKALISSEEDQENEGQLMEDRVIRSIGVGITRSNLLT---------HSSSSFCSIRSCNFLMDDLIGTESGVCLTSNSE

Query:  EIEEKLPHFDFDCRHYRTNRHDFT-------AKKQFPPPIP-FVVQAGHRPRSPWILTRYCSNRRLILKLERVTQHQSLESRRENGRLILNLVP-----I
        E EEKL H  FD      N H FT        KKQFPPPIP    QAG R RSPWILTRY S+RRLILKLERV  HQS+ES RENGRLILNLVP     +
Subjt:  EIEEKLPHFDFDCRHYRTNRHDFT-------AKKQFPPPIP-FVVQAGHRPRSPWILTRYCSNRRLILKLERVTQHQSLESRRENGRLILNLVP-----I

Query:  DDQDLQYFIEEDEGNEEIIESIECEGGEDEGTDSEIAFKSFTYGGAGGGGGGI----MFCGVNGKFEERHVVHGHFGSAPLRPMGTVM
         +QDLQ FIEEDEGNEE I+SIE E GE++ T  EI+ +SFTYGG G  GG      +FCGVNG  EERHVVHGHF S PLRP+GTVM
Subjt:  DDQDLQYFIEEDEGNEEIIESIECEGGEDEGTDSEIAFKSFTYGGAGGGGGGI----MFCGVNGKFEERHVVHGHFGSAPLRPMGTVM

XP_031741733.1 uncharacterized protein LOC105435501 [Cucumis sativus]5.6e-7775.74Show/hide
Query:  MDDLIGTESGVCLTSNSEEIEEKLPHFDFDCRHYRTNRHDF-------TAKKQFPPPIPFVV--QAGHRPRSPWILTRYCSNRRLILKLERVTQHQSLES
        MDDLIGTESGVCLTSNSEE+E    H DFDC +YRT+RH F         KKQFPPPIPF+    AG+RPRSPW+LTRY SNRRLILKLERVTQHQSLES
Subjt:  MDDLIGTESGVCLTSNSEEIEEKLPHFDFDCRHYRTNRHDF-------TAKKQFPPPIPFVV--QAGHRPRSPWILTRYCSNRRLILKLERVTQHQSLES

Query:  RRENGRLILNLVPIDDQD---LQYFIEEDEGNEEIIESIECEGGEDEGTDSEIAFKSFTYGG-AGGGGGGIMFCGVNGKFEERHVVHGHFGSAPLRPMGT
        RRENGRLILNLVPID++D    Q+ IEE EGNEEI+ESI+C+GGEDEGTDSEI+ +S+TYGG  GGGGGG+ FCG NG FEERHVVHGHFGSAPLRPMGT
Subjt:  RRENGRLILNLVPIDDQD---LQYFIEEDEGNEEIIESIECEGGEDEGTDSEIAFKSFTYGG-AGGGGGGIMFCGVNGKFEERHVVHGHFGSAPLRPMGT

Query:  VM
        VM
Subjt:  VM

TrEMBL top hitse value%identityAlignment
A0A0A0KRM2 Uncharacterized protein1.3e-9267.01Show/hide
Query:  MQKQSQTPVVEEEAVPFSIS-GLKALISSEEDQENEGQLMEDRVIRSIGVGITRSNLLTHSSSS---------------FCSIRSCNFLMDDLIGTESGV
        +QK ++ P +    + FSIS GLK+LISS++      Q  ED VIRS+G+ I RSNLLTHSSSS               F SIRSCNF MDDLIGTESGV
Subjt:  MQKQSQTPVVEEEAVPFSIS-GLKALISSEEDQENEGQLMEDRVIRSIGVGITRSNLLTHSSSS---------------FCSIRSCNFLMDDLIGTESGV

Query:  CLTSNSEEIEEKLPHFDFDCRHYRTNRHDF-------TAKKQFPPPIPFVV--QAGHRPRSPWILTRYCSNRRLILKLERVTQHQSLESRRENGRLILNL
        CLTSNSEE+E    H DFDC +YRT+RH F         KKQFPPPIPF+    AG+RPRSPW+LTRY SNRRLILKLERVTQHQSLESRRENGRLILNL
Subjt:  CLTSNSEEIEEKLPHFDFDCRHYRTNRHDF-------TAKKQFPPPIPFVV--QAGHRPRSPWILTRYCSNRRLILKLERVTQHQSLESRRENGRLILNL

Query:  VPIDDQD---LQYFIEEDEGNEEIIESIECEGGEDEGTDSEIAFKSFTYGG-AGGGGGGIMFCGVNGKFEERHVVHGHFGSAPLRPMGTVM
        VPID++D    Q+ IEE EGNEEI+ESI+C+GGEDEGTDSEI+ +S+TYGG  GGGGGG+ FCG NG FEERHVVHGHFGSAPLRPMGTVM
Subjt:  VPIDDQD---LQYFIEEDEGNEEIIESIECEGGEDEGTDSEIAFKSFTYGG-AGGGGGGIMFCGVNGKFEERHVVHGHFGSAPLRPMGTVM

A0A1S4E2W2 uncharacterized protein LOC1034992999.3e-7875.6Show/hide
Query:  MDDLIGTESGVCLTSNSEEIEEKLPHFDFDCRHYRTNRHDFT-------AKKQFPPPIPFVV--QAGHRPRSPWILTRYCSNRRLILKLERVTQHQSLES
        MDDLIGTESGVCLTSNSEE+E    H DFDCR YRTNRH+F         KKQ+PPPIPF+    AG+RPRSPWILTRY SNRRLILKLERVTQHQSLES
Subjt:  MDDLIGTESGVCLTSNSEEIEEKLPHFDFDCRHYRTNRHDFT-------AKKQFPPPIPFVV--QAGHRPRSPWILTRYCSNRRLILKLERVTQHQSLES

Query:  RRENGRLILNLVPIDDQD--LQYFIEEDEGNEEIIESIECEGGEDEGTDSEIAFKSFTY---------GGAGGGGGGIMFCGVNGKFEERHVVHGHFGSA
        RRENGRLILNLVPI+D+   LQ+ IEE EG+EEI+ESIEC+GGEDEGTDSEI+FKS TY         GG GGGGGG+MFCGVNG FEERHVVHGH GSA
Subjt:  RRENGRLILNLVPIDDQD--LQYFIEEDEGNEEIIESIECEGGEDEGTDSEIAFKSFTY---------GGAGGGGGGIMFCGVNGKFEERHVVHGHFGSA

Query:  PLRPMGTVM
        PLRPMGTVM
Subjt:  PLRPMGTVM

A0A5D3DS64 Protein FAF-like1.9e-8666.67Show/hide
Query:  MQKQSQTPVVEEEAVPFSIS-GLKALISSEEDQENEGQLMEDRVIRSIGVGITRSNLLTHSSSSFCSIRSCNFLMDDLIGTESGVCLTSNSEEIEEKLPH
        +QK +Q   ++   +PFSIS GLK+LISS++      Q+ ED +I S+G+ I               IRSCNF MDDLIGTESGVCLTSNSEE+E    H
Subjt:  MQKQSQTPVVEEEAVPFSIS-GLKALISSEEDQENEGQLMEDRVIRSIGVGITRSNLLTHSSSSFCSIRSCNFLMDDLIGTESGVCLTSNSEEIEEKLPH

Query:  FDFDCRHYRTNRHDFT-------AKKQFPPPIPFVV--QAGHRPRSPWILTRYCSNRRLILKLERVTQHQSLESRRENGRLILNLVPIDDQD--LQYFIE
         DFDCR YRTNRH+F         KKQ+PPPIPF+    AG+RPRSPWILTRY SNRRLILKLERVTQHQSLESRRENGRLILNLVPI+D+   LQ+ IE
Subjt:  FDFDCRHYRTNRHDFT-------AKKQFPPPIPFVV--QAGHRPRSPWILTRYCSNRRLILKLERVTQHQSLESRRENGRLILNLVPIDDQD--LQYFIE

Query:  EDEGNEEIIESIECEGGEDEGTDSEIAFKSFTY-----GGAGGGGGGIMFCGVNGKFEERHVVHGHFGSAPLRPMGTVM
        E EG+EEI+ESIEC+GGEDEGTDSEI+FKS TY     GG GGGGGG+MFCGVNG FEERHVVHGH GSAPLRPMGTVM
Subjt:  EDEGNEEIIESIECEGGEDEGTDSEIAFKSFTY-----GGAGGGGGGIMFCGVNGKFEERHVVHGHFGSAPLRPMGTVM

A0A6J1CJZ0 uncharacterized protein LOC1110118616.1e-6157.64Show/hide
Query:  MQKQSQTPVVEEEAVPFSISGLKALISSEEDQENEGQLMEDRVIRSIGVGITRSNLLTHSSSSFCSIRSCNFLMDDLIGTESGVCLTSN-SEEIEEKLPH
        MQ   + PV   E+V FSISGLKALISSEE +  EG+    R+IRS GVGI RS LLTHSSSS  SIRSC  LMDDLIGTESGVCLT++ +EEI+EK   
Subjt:  MQKQSQTPVVEEEAVPFSISGLKALISSEEDQENEGQLMEDRVIRSIGVGITRSNLLTHSSSSFCSIRSCNFLMDDLIGTESGVCLTSN-SEEIEEKLPH

Query:  FDFDCRHYRTNRHDF-------TAKKQFPPPIPFV-VQAGHRPRSPWILTRYCSNRRLILKLERVTQHQSLESRRENGRLILNLVPI--------DDQDL
           D R++R +  D         A+KQFPPPI F+  QAG R R PW+LTR+CS+ RL L LERV   Q +ES RENGRLIL  VP         DD+DL
Subjt:  FDFDCRHYRTNRHDF-------TAKKQFPPPIPFV-VQAGHRPRSPWILTRYCSNRRLILKLERVTQHQSLESRRENGRLILNLVPI--------DDQDL

Query:  QYFIEEDEGNE------EIIESIECEGGEDEGTDSEIAFKSFTYGGAGGGGGGIM----FCGVNGKFEERHVVHGHFGSAPLRPMGTV
        Q F+EED G E      E IESIECE GE     S+ AFKSFTYGG G GGG       FC V     +RHVV+GHFGSAPLRPMGTV
Subjt:  QYFIEEDEGNE------EIIESIECEGGEDEGTDSEIAFKSFTYGGAGGGGGGIM----FCGVNGKFEERHVVHGHFGSAPLRPMGTV

A0A6J1FG13 uncharacterized protein LOC1114451565.1e-7666.18Show/hide
Query:  MQKQSQTPVVEEEAVPFSISGLKALISSEEDQENEGQLMEDRVIRSIGVGITRSNLLTHSSSSFCSIRSCNFLMDDLIGTESGVCLTSNSEEIEEKLPHF
        M  Q Q PVV  EAV FSISGLKALISS+E+ +  GQ  EDRVIRS G+GI  S LLT SSSS  SI SCN LMDDLIGTESGV LT N+EE EEKL H 
Subjt:  MQKQSQTPVVEEEAVPFSISGLKALISSEEDQENEGQLMEDRVIRSIGVGITRSNLLTHSSSSFCSIRSCNFLMDDLIGTESGVCLTSNSEEIEEKLPHF

Query:  DFDCRHYRTNRHDFT-------AKKQFPPPIP-FVVQAGHRPRSPWILTRYCSNRRLILKLERVTQHQSLESRRENGRLILNLVP-----IDDQDLQYFI
         FD  H  TN H FT        KKQFPPPIP    QAG R RSPWILTRY S+RRLILKLERV  HQS+ES RENGRLILNLVP     +D+QDLQ FI
Subjt:  DFDCRHYRTNRHDFT-------AKKQFPPPIP-FVVQAGHRPRSPWILTRYCSNRRLILKLERVTQHQSLESRRENGRLILNLVP-----IDDQDLQYFI

Query:  EEDEGNEEIIESIECEGGEDEGTDSEIAFKSFTYGGAGGGGGGI----MFCGVNGKFEERHVVHGHFGSAPLRPM
        EEDEGNEE I+SIE E GED  T  EI+ +SFTYGG G  GG      +FCGVNG  EERHVVH HF S PLRP+
Subjt:  EEDEGNEEIIESIECEGGEDEGTDSEIAFKSFTYGGAGGGGGGI----MFCGVNGKFEERHVVHGHFGSAPLRPM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G22110.1 structural constituent of ribosome1.2e-1331.07Show/hide
Query:  SNLLTHSSSSFCSIRSCNFLMDDLIGTESGVCLTSNSE-------EIEEKLPHFDFDCRHYRTNRHDFTAKKQFPPPIPFVVQAGH-RPRSPWILTR-YC
        S++L+ +SSS  S       + D IGTES   + S  E         E     F +  R          A ++FPPPIP + Q G+  P  PW+L R   
Subjt:  SNLLTHSSSSFCSIRSCNFLMDDLIGTESGVCLTSNSE-------EIEEKLPHFDFDCRHYRTNRHDFTAKKQFPPPIPFVVQAGH-RPRSPWILTR-YC

Query:  SNRRLILKLERVTQHQSLESRRENGRLILNLVPIDD-------QDLQYFIEEDEGNEEIIESIECEGGEDEGTDSEI
        S+ RLIL+ E+V  H+   + R NGRL L+LVP+DD       +   Y  +++E ++E  +  EC+  + +  + ++
Subjt:  SNRRLILKLERVTQHQSLESRRENGRLILNLVPIDD-------QDLQYFIEEDEGNEEIIESIECEGGEDEGTDSEI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAAAGCAGAGCCAAACTCCAGTCGTCGAAGAAGAAGCAGTACCATTCTCAATTTCTGGACTCAAAGCCCTAATTTCTTCTGAAGAAGATCAAGAAAATGAAGGGCA
ATTAATGGAAGATCGAGTAATTCGCAGTATTGGAGTCGGCATTACCAGGTCAAATCTGTTGACTCATTCCTCTTCTTCTTTTTGTTCAATCAGATCTTGTAATTTCTTAA
TGGACGATTTGATCGGGACTGAGAGCGGCGTTTGCTTGACTTCGAATTCAGAAGAAATTGAAGAGAAATTACCTCATTTCGATTTCGATTGCCGTCATTATCGCACTAAT
CGCCACGATTTTACTGCGAAAAAGCAGTTTCCACCGCCGATTCCTTTTGTAGTACAAGCAGGGCATCGACCACGATCGCCATGGATCTTAACAAGATATTGCTCAAATAG
AAGGTTGATTTTGAAACTGGAGAGAGTGACGCAACATCAGTCCTTGGAATCGCGCCGCGAAAATGGCCGTTTAATTCTCAATCTCGTACCGATAGACGATCAGGATCTTC
AGTACTTCATCGAAGAGGATGAAGGAAATGAGGAGATCATCGAATCGATTGAATGCGAAGGAGGAGAAGATGAAGGTACAGATTCTGAAATTGCTTTCAAGAGTTTTACG
TACGGCGGAGCGGGCGGCGGCGGTGGAGGAATAATGTTTTGTGGTGTAAATGGTAAATTTGAAGAACGACATGTCGTTCATGGACATTTTGGTTCGGCACCGCTTCGTCC
GATGGGTACAGTTATGTGA
mRNA sequenceShow/hide mRNA sequence
ATGCAAAAGCAGAGCCAAACTCCAGTCGTCGAAGAAGAAGCAGTACCATTCTCAATTTCTGGACTCAAAGCCCTAATTTCTTCTGAAGAAGATCAAGAAAATGAAGGGCA
ATTAATGGAAGATCGAGTAATTCGCAGTATTGGAGTCGGCATTACCAGGTCAAATCTGTTGACTCATTCCTCTTCTTCTTTTTGTTCAATCAGATCTTGTAATTTCTTAA
TGGACGATTTGATCGGGACTGAGAGCGGCGTTTGCTTGACTTCGAATTCAGAAGAAATTGAAGAGAAATTACCTCATTTCGATTTCGATTGCCGTCATTATCGCACTAAT
CGCCACGATTTTACTGCGAAAAAGCAGTTTCCACCGCCGATTCCTTTTGTAGTACAAGCAGGGCATCGACCACGATCGCCATGGATCTTAACAAGATATTGCTCAAATAG
AAGGTTGATTTTGAAACTGGAGAGAGTGACGCAACATCAGTCCTTGGAATCGCGCCGCGAAAATGGCCGTTTAATTCTCAATCTCGTACCGATAGACGATCAGGATCTTC
AGTACTTCATCGAAGAGGATGAAGGAAATGAGGAGATCATCGAATCGATTGAATGCGAAGGAGGAGAAGATGAAGGTACAGATTCTGAAATTGCTTTCAAGAGTTTTACG
TACGGCGGAGCGGGCGGCGGCGGTGGAGGAATAATGTTTTGTGGTGTAAATGGTAAATTTGAAGAACGACATGTCGTTCATGGACATTTTGGTTCGGCACCGCTTCGTCC
GATGGGTACAGTTATGTGA
Protein sequenceShow/hide protein sequence
MQKQSQTPVVEEEAVPFSISGLKALISSEEDQENEGQLMEDRVIRSIGVGITRSNLLTHSSSSFCSIRSCNFLMDDLIGTESGVCLTSNSEEIEEKLPHFDFDCRHYRTN
RHDFTAKKQFPPPIPFVVQAGHRPRSPWILTRYCSNRRLILKLERVTQHQSLESRRENGRLILNLVPIDDQDLQYFIEEDEGNEEIIESIECEGGEDEGTDSEIAFKSFT
YGGAGGGGGGIMFCGVNGKFEERHVVHGHFGSAPLRPMGTVM