; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi09G009980 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi09G009980
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionProtein TAR1
Genome locationchr09:13613847..13614855
RNA-Seq ExpressionLsi09G009980
SyntenyLsi09G009980
Gene Ontology termsGO:0043457 - regulation of cellular respiration (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF3951938.1 hypothetical protein CMV_022457 [Castanea mollissima]1.4e-8377.83Show/hide
Query:  MCKCRSHGTFPLFGLQSSHLNICYYHQDLHRRPLRPGSRPRFCSDRRALLLIGAWLLPRRPGIGRALQRHPFSGLVDSAVSLRASTRVSS--GFAPLRHS
        MCKCRSHGTFPLFGLQSSHLNICYYHQDLHRRPLRPGSRPRFCSDRRALLLIGAW LPRRPGIGRALQRHPFSGLVDSAV L  +  + +    A L  +
Subjt:  MCKCRSHGTFPLFGLQSSHLNICYYHQDLHRRPLRPGSRPRFCSDRRALLLIGAWLLPRRPGIGRALQRHPFSGLVDSAVSLRASTRVSS--GFAPLRHS

Query:  SPSFGSRQACSHSNPSQKIKVGRWCNPLGDPTSQLPCALRVYSPVNSHTCQTPWSVFQDGSNGEPTGRCQERADAEARPKARAASHDRDDDVSTGVT--K
        +      + CSHSNPSQKIKVGR C+P GDP +QLPCALRVY PV+SHTCQTPWSVFQDG NGEP GRCQERADAEAR +ARAASHDR +DVS G+T  +
Subjt:  SPSFGSRQACSHSNPSQKIKVGRWCNPLGDPTSQLPCALRVYSPVNSHTCQTPWSVFQDGSNGEPTGRCQERADAEARPKARAASHDRDDDVSTGVT--K

Query:  AWA
        AWA
Subjt:  AWA

KAF3969134.1 hypothetical protein CMV_007046 [Castanea mollissima]3.7e-8170.04Show/hide
Query:  MCKCRSHGTFPLFGLQSSHLNICYYHQDLHRRPLRPGSRPRFCSDRRALLLIGAWLLPRRPGIGRALQRHPFSGLVDSAVSLRASTRVSSGFA---PLRH
        MCKCRSHGTFPLFGLQSSHLNICYYHQDLHRRPLRPGSRPRFCSDRRALLLIGAW LPRRPGIGRALQRHPFSGLVDSA  L        G     P+  
Subjt:  MCKCRSHGTFPLFGLQSSHLNICYYHQDLHRRPLRPGSRPRFCSDRRALLLIGAWLLPRRPGIGRALQRHPFSGLVDSAVSLRASTRVSSGFA---PLRH

Query:  SSPSFGSR-----------------------QACSHSNPSQKIKVGRWCNPLGDPTSQLPCALRVYSPVNSHTCQTPWSVFQDGSNGEPTGRCQERADAE
        +SP   ++                       + CSHSNPSQKIKVGR C+P GDP +QLPCALRVY PV+SHTCQTPWSVFQDG NGEP GRCQERADAE
Subjt:  SSPSFGSR-----------------------QACSHSNPSQKIKVGRWCNPLGDPTSQLPCALRVYSPVNSHTCQTPWSVFQDGSNGEPTGRCQERADAE

Query:  ARPKARAASHDRDDDVSTGVT--KAWA
        AR +ARAASHDR +DVS G+T  +AWA
Subjt:  ARPKARAASHDRDDDVSTGVT--KAWA

PHT25997.1 Protein TAR1 [Capsicum baccatum]2.0e-8284.09Show/hide
Query:  MCKCRSHGTFPLFGLQSSHLNICYYHQDLHRRPLRPGSRPRFCSDRRALLLIGAWLLPRRPGIGRALQRHPFSGLVDSAVSLRASTRVSSGFAPLRHSSP
        MCKCRSHGTFPLFGLQSSHLNICYYHQDLHRRPLR GSRPRFCSDRR LLLIGAW LPRR G+GRAL+ HPFSGLVDSAV LRA TRV SGFAPLRH+SP
Subjt:  MCKCRSHGTFPLFGLQSSHLNICYYHQDLHRRPLRPGSRPRFCSDRRALLLIGAWLLPRRPGIGRALQRHPFSGLVDSAVSLRASTRVSSGFAPLRHSSP

Query:  SFGSRQACSHSNPSQKIKVGRWCNPLGDPTSQLPCALRVYSPVNSHTCQTPWSVFQDGSNGEPTGRCQERADAEAR
        SFGSRQ CSHSNPSQKIKV +WC P GDP +QLPCALRVYS V+SHTCQTPWS+FQDGSNGEPTG+  +R D E R
Subjt:  SFGSRQACSHSNPSQKIKVGRWCNPLGDPTSQLPCALRVYSPVNSHTCQTPWSVFQDGSNGEPTGRCQERADAEAR

TKR97783.1 hypothetical protein D5086_0000209830 [Populus alba]4.2e-8590.64Show/hide
Query:  MCKCRSHGTFPLFGLQSSHLNICYYHQDLHRRPLRPGSRPRFCSDRRALLLIGAWLLPRRPGIGRALQRHPFSGLVDSAVSLRASTRVSSGFAPLRHSSP
        MCKCRSHGTFPLFGLQSSHLNICYYHQDLHRRPLRPGSRP FCSDRRALLLIGAW LPRRPGIGRALQRHPFSGLVDSAVSLR STRVSSGFAPLRHSSP
Subjt:  MCKCRSHGTFPLFGLQSSHLNICYYHQDLHRRPLRPGSRPRFCSDRRALLLIGAWLLPRRPGIGRALQRHPFSGLVDSAVSLRASTRVSSGFAPLRHSSP

Query:  SFGSRQACSHSNPSQKIKVGRWCNPLGDPTSQLPCALRVYSPVNSHTCQTPWSVFQDGSNGEPTGRCQERA
        SFGSRQACSHSNPSQKIKVGR CNP GDP SQLPCALRVYSPV+SHTCQTPWSVFQD  +G  TG  + RA
Subjt:  SFGSRQACSHSNPSQKIKVGRWCNPLGDPTSQLPCALRVYSPVNSHTCQTPWSVFQDGSNGEPTGRCQERA

TKS01559.1 hypothetical protein D5086_0000171980 [Populus alba]3.6e-9294.32Show/hide
Query:  MCKCRSHGTFPLFGLQSSHLNICYYHQDLHRRPLRPGSRPRFCSDRRALLLIGAWLLPRRPGIGRALQRHPFSGLVDSAVSLRASTRVSSGFAPLRHSSP
        MCKCRSHGTFPLFGLQSSHLNICYYHQDLHRRPLRPGSRP FCSDRRALLLIGAW LPRRPGIGRALQRHPFSGLVDSAVSLRASTRVSSGFAPLRHSSP
Subjt:  MCKCRSHGTFPLFGLQSSHLNICYYHQDLHRRPLRPGSRPRFCSDRRALLLIGAWLLPRRPGIGRALQRHPFSGLVDSAVSLRASTRVSSGFAPLRHSSP

Query:  SFGSRQACSHSNPSQKIKVGRWCNPLGDPTSQLPCALRVYSPVNSHTCQTPWSVFQDGSNGEPTGRCQERADAEAR
        SFGSRQACSHSNPSQKIKVGR CNP GDP SQLPCALRVYSPV+SHTCQTPWSVFQDG+NGEPTGRC ERA A AR
Subjt:  SFGSRQACSHSNPSQKIKVGRWCNPLGDPTSQLPCALRVYSPVNSHTCQTPWSVFQDGSNGEPTGRCQERADAEAR

TrEMBL top hitse value%identityAlignment
A0A2N9I9H1 Uncharacterized protein9.5e-9989.55Show/hide
Query:  MCKCRSHGTFPLFGLQSSHLNICYYHQDLHRRPLRPGSRPRFCSDRRALLLIGAWLLPRRPGIGRALQRHPFSGLVDSAVSLRASTRVSSGFAPLRHSSP
        MCKCRSHGTFPLFGLQSSHLNICYYHQDLHRRPLRPGSRPRFCSDRRALLLIGAW LPRRPGIGRALQRHPFSGLVDSAVSLRASTRVSSGFAPLRHSSP
Subjt:  MCKCRSHGTFPLFGLQSSHLNICYYHQDLHRRPLRPGSRPRFCSDRRALLLIGAWLLPRRPGIGRALQRHPFSGLVDSAVSLRASTRVSSGFAPLRHSSP

Query:  SFGSRQACSHSNPSQKIKVGRWCNPLGDPTSQLPCALRVYSPVNSHTCQTPWSVFQDGSNGEPTGRCQERADAEARPKARAASHDRDDDVSTGVT--KAW
        SFGSRQ CSHSNPSQKIKVGR CNP GDP +QLP ALRVY PV+SHTCQTPWSVFQDG NGEP GR QE ADAEAR +ARAA HDRDDDVS G+T  +AW
Subjt:  SFGSRQACSHSNPSQKIKVGRWCNPLGDPTSQLPCALRVYSPVNSHTCQTPWSVFQDGSNGEPTGRCQERADAEARPKARAASHDRDDDVSTGVT--KAW

Query:  A
        A
Subjt:  A

A0A2N9IDP5 Uncharacterized protein9.5e-9989.55Show/hide
Query:  MCKCRSHGTFPLFGLQSSHLNICYYHQDLHRRPLRPGSRPRFCSDRRALLLIGAWLLPRRPGIGRALQRHPFSGLVDSAVSLRASTRVSSGFAPLRHSSP
        MCKCRSHGTFPLFGLQSSHLNICYYHQDLHRRPLRPGSRPRFCSDRRALLLIGAW LPRRPGIGRALQRHPFSGLVDSAVSLRASTRVSSGFAPLRHSSP
Subjt:  MCKCRSHGTFPLFGLQSSHLNICYYHQDLHRRPLRPGSRPRFCSDRRALLLIGAWLLPRRPGIGRALQRHPFSGLVDSAVSLRASTRVSSGFAPLRHSSP

Query:  SFGSRQACSHSNPSQKIKVGRWCNPLGDPTSQLPCALRVYSPVNSHTCQTPWSVFQDGSNGEPTGRCQERADAEARPKARAASHDRDDDVSTGVT--KAW
        SFGSRQ CSHSNPSQKIKVGR CNP GDP +QLP ALRVY PV+SHTCQTPWSVFQDG NGEP GR QE ADAEAR +ARAA HDRDDDVS G+T  +AW
Subjt:  SFGSRQACSHSNPSQKIKVGRWCNPLGDPTSQLPCALRVYSPVNSHTCQTPWSVFQDGSNGEPTGRCQERADAEARPKARAASHDRDDDVSTGVT--KAW

Query:  A
        A
Subjt:  A

A0A2N9IJL7 Uncharacterized protein9.5e-9989.55Show/hide
Query:  MCKCRSHGTFPLFGLQSSHLNICYYHQDLHRRPLRPGSRPRFCSDRRALLLIGAWLLPRRPGIGRALQRHPFSGLVDSAVSLRASTRVSSGFAPLRHSSP
        MCKCRSHGTFPLFGLQSSHLNICYYHQDLHRRPLRPGSRPRFCSDRRALLLIGAW LPRRPGIGRALQRHPFSGLVDSAVSLRASTRVSSGFAPLRHSSP
Subjt:  MCKCRSHGTFPLFGLQSSHLNICYYHQDLHRRPLRPGSRPRFCSDRRALLLIGAWLLPRRPGIGRALQRHPFSGLVDSAVSLRASTRVSSGFAPLRHSSP

Query:  SFGSRQACSHSNPSQKIKVGRWCNPLGDPTSQLPCALRVYSPVNSHTCQTPWSVFQDGSNGEPTGRCQERADAEARPKARAASHDRDDDVSTGVT--KAW
        SFGSRQ CSHSNPSQKIKVGR CNP GDP +QLP ALRVY PV+SHTCQTPWSVFQDG NGEP GR QE ADAEAR +ARAA HDRDDDVS G+T  +AW
Subjt:  SFGSRQACSHSNPSQKIKVGRWCNPLGDPTSQLPCALRVYSPVNSHTCQTPWSVFQDGSNGEPTGRCQERADAEARPKARAASHDRDDDVSTGVT--KAW

Query:  A
        A
Subjt:  A

A0A4U5PMF1 Uncharacterized protein2.1e-8590.64Show/hide
Query:  MCKCRSHGTFPLFGLQSSHLNICYYHQDLHRRPLRPGSRPRFCSDRRALLLIGAWLLPRRPGIGRALQRHPFSGLVDSAVSLRASTRVSSGFAPLRHSSP
        MCKCRSHGTFPLFGLQSSHLNICYYHQDLHRRPLRPGSRP FCSDRRALLLIGAW LPRRPGIGRALQRHPFSGLVDSAVSLR STRVSSGFAPLRHSSP
Subjt:  MCKCRSHGTFPLFGLQSSHLNICYYHQDLHRRPLRPGSRPRFCSDRRALLLIGAWLLPRRPGIGRALQRHPFSGLVDSAVSLRASTRVSSGFAPLRHSSP

Query:  SFGSRQACSHSNPSQKIKVGRWCNPLGDPTSQLPCALRVYSPVNSHTCQTPWSVFQDGSNGEPTGRCQERA
        SFGSRQACSHSNPSQKIKVGR CNP GDP SQLPCALRVYSPV+SHTCQTPWSVFQD  +G  TG  + RA
Subjt:  SFGSRQACSHSNPSQKIKVGRWCNPLGDPTSQLPCALRVYSPVNSHTCQTPWSVFQDGSNGEPTGRCQERA

A0A4U5PWI8 Uncharacterized protein1.7e-9294.32Show/hide
Query:  MCKCRSHGTFPLFGLQSSHLNICYYHQDLHRRPLRPGSRPRFCSDRRALLLIGAWLLPRRPGIGRALQRHPFSGLVDSAVSLRASTRVSSGFAPLRHSSP
        MCKCRSHGTFPLFGLQSSHLNICYYHQDLHRRPLRPGSRP FCSDRRALLLIGAW LPRRPGIGRALQRHPFSGLVDSAVSLRASTRVSSGFAPLRHSSP
Subjt:  MCKCRSHGTFPLFGLQSSHLNICYYHQDLHRRPLRPGSRPRFCSDRRALLLIGAWLLPRRPGIGRALQRHPFSGLVDSAVSLRASTRVSSGFAPLRHSSP

Query:  SFGSRQACSHSNPSQKIKVGRWCNPLGDPTSQLPCALRVYSPVNSHTCQTPWSVFQDGSNGEPTGRCQERADAEAR
        SFGSRQACSHSNPSQKIKVGR CNP GDP SQLPCALRVYSPV+SHTCQTPWSVFQDG+NGEPTGRC ERA A AR
Subjt:  SFGSRQACSHSNPSQKIKVGRWCNPLGDPTSQLPCALRVYSPVNSHTCQTPWSVFQDGSNGEPTGRCQERADAEAR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGCAAGTGCCGTTCACATGGAACCTTTCCCCTCTTCGGCCTTCAAAGTTCTCATTTGAATATTTGCTACTACCACCAAGATCTGCACCGACGGCCGCTCCGCCCGGG
CTCGCGCCCAAGGTTTTGCAGCGACCGTCGCGCCCTCCTACTCATCGGGGCCTGGCTCTTGCCCCGACGGCCGGGTATAGGTCGCGCGCTTCAGCGCCATCCATTTTCGG
GGCTAGTTGATTCGGCAGTATCGCTGCGGGCCTCCACCAGAGTTTCCTCTGGCTTCGCCCCGCTCAGGCATAGTTCACCATCTTTCGGGTCCCGACAGGCATGCTCACAC
TCGAACCCTTCTCAGAAGATCAAGGTCGGTCGGTGGTGCAACCCACTAGGGGATCCCACCAGTCAGCTTCCTTGCGCCTTACGGGTTTACTCGCCCGTTAACTCGCACAC
ATGTCAGACTCCTTGGTCCGTGTTTCAAGACGGGTCGAATGGGGAGCCCACAGGCCGATGCCAGGAGCGCGCAGATGCCGAAGCCCGCCCGAAGGCGCGCGCTGCCAGCC
ACGATCGGGACGACGACGTCTCCACAGGCGTAACAAAGGCCTGGGCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGTGCAAGTGCCGTTCACATGGAACCTTTCCCCTCTTCGGCCTTCAAAGTTCTCATTTGAATATTTGCTACTACCACCAAGATCTGCACCGACGGCCGCTCCGCCCGGG
CTCGCGCCCAAGGTTTTGCAGCGACCGTCGCGCCCTCCTACTCATCGGGGCCTGGCTCTTGCCCCGACGGCCGGGTATAGGTCGCGCGCTTCAGCGCCATCCATTTTCGG
GGCTAGTTGATTCGGCAGTATCGCTGCGGGCCTCCACCAGAGTTTCCTCTGGCTTCGCCCCGCTCAGGCATAGTTCACCATCTTTCGGGTCCCGACAGGCATGCTCACAC
TCGAACCCTTCTCAGAAGATCAAGGTCGGTCGGTGGTGCAACCCACTAGGGGATCCCACCAGTCAGCTTCCTTGCGCCTTACGGGTTTACTCGCCCGTTAACTCGCACAC
ATGTCAGACTCCTTGGTCCGTGTTTCAAGACGGGTCGAATGGGGAGCCCACAGGCCGATGCCAGGAGCGCGCAGATGCCGAAGCCCGCCCGAAGGCGCGCGCTGCCAGCC
ACGATCGGGACGACGACGTCTCCACAGGCGTAACAAAGGCCTGGGCTTAG
Protein sequenceShow/hide protein sequence
MCKCRSHGTFPLFGLQSSHLNICYYHQDLHRRPLRPGSRPRFCSDRRALLLIGAWLLPRRPGIGRALQRHPFSGLVDSAVSLRASTRVSSGFAPLRHSSPSFGSRQACSH
SNPSQKIKVGRWCNPLGDPTSQLPCALRVYSPVNSHTCQTPWSVFQDGSNGEPTGRCQERADAEARPKARAASHDRDDDVSTGVTKAWA